BLASTX nr result
ID: Coptis25_contig00004019
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00004019 (738 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21012.3| unnamed protein product [Vitis vinifera] 79 9e-16 ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261... 79 9e-16 ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|2... 80 8e-15 ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454... 73 3e-14 ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|2... 74 3e-14 >emb|CBI21012.3| unnamed protein product [Vitis vinifera] Length = 1094 Score = 79.3 bits (194), Expect(2) = 9e-16 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Frame = -2 Query: 467 SLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQK 291 SL WR+ PI P LG +K+ Q +SD YDILEDDTP ILKD TP KAVKAS P QK Sbjct: 867 SLRWRSSPIPPSTQLGETKIFQGLESDNELYDILEDDTPTILKDASTPTKAVKASSPKQK 926 Query: 290 RVSPPNTRS 264 RVSPP +S Sbjct: 927 RVSPPKIQS 935 Score = 30.0 bits (66), Expect(2) = 9e-16 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -3 Query: 214 KFVLQSISSFPSLTPYGDPEGSS 146 KF+LQ++ SFP LTP D + SS Sbjct: 952 KFILQAVPSFPPLTPCIDTKSSS 974 >ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera] Length = 1001 Score = 79.3 bits (194), Expect(2) = 9e-16 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Frame = -2 Query: 467 SLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQK 291 SL WR+ PI P LG +K+ Q +SD YDILEDDTP ILKD TP KAVKAS P QK Sbjct: 880 SLRWRSSPIPPSTQLGETKIFQGLESDNELYDILEDDTPTILKDASTPTKAVKASSPKQK 939 Query: 290 RVSPPNTRS 264 RVSPP +S Sbjct: 940 RVSPPKIQS 948 Score = 30.0 bits (66), Expect(2) = 9e-16 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -3 Query: 214 KFVLQSISSFPSLTPYGDPEGSS 146 KF+LQ++ SFP LTP D + SS Sbjct: 965 KFILQAVPSFPPLTPCIDTKSSS 987 >ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|222855587|gb|EEE93134.1| predicted protein [Populus trichocarpa] Length = 847 Score = 79.7 bits (195), Expect(2) = 8e-15 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 1/68 (1%) Frame = -2 Query: 470 ASLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQ 294 +SL W + PITPM LG +K Q DSD G YDILEDDTP+ILKD+ PI +VKAS PN+ Sbjct: 735 SSLHWYSSPITPMTRLGETK-NQAQDSDCGLYDILEDDTPEILKDSSAPITSVKASSPNK 793 Query: 293 KRVSPPNT 270 KRVSPP++ Sbjct: 794 KRVSPPHS 801 Score = 26.6 bits (57), Expect(2) = 8e-15 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -3 Query: 214 KFVLQSISSFPSLTP 170 KF+L+S+ SFP LTP Sbjct: 821 KFILKSVPSFPPLTP 835 >ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1, putative [Ricinus communis] Length = 873 Score = 72.8 bits (177), Expect(2) = 3e-14 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Frame = -2 Query: 467 SLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQK 291 S+ W PITPM LG +K+ Q DSD G Y+ILEDDTP+ILK+ TP +VKAS PN+K Sbjct: 762 SVRWWNSPITPMTRLGENKI-QGHDSDSGLYNILEDDTPEILKEGSTPSASVKASSPNKK 820 Query: 290 RVSPP 276 RVSPP Sbjct: 821 RVSPP 825 Score = 31.6 bits (70), Expect(2) = 3e-14 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 Query: 268 DHLHNXXXXXXXXXXXXRKFVLQSISSFPSLTPYGDPEG 152 +H+H+ RKF+L+S+ SFP LTP + EG Sbjct: 827 NHIHDFRSSSSGGLKSGRKFILRSVPSFPPLTPCVNSEG 865 >ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|222866282|gb|EEF03413.1| predicted protein [Populus trichocarpa] Length = 140 Score = 74.3 bits (181), Expect(2) = 3e-14 Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Frame = -2 Query: 473 SASLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPN 297 S SL WR+ PITPM LG +K Q DS G YDILED TP+I K++ TP+ +VKAS P+ Sbjct: 29 SGSLQWRSSPITPMTRLGETKT-QALDSGCGLYDILEDGTPEIFKESPTPVTSVKASSPH 87 Query: 296 QKRVSPP 276 +KRVSPP Sbjct: 88 KKRVSPP 94 Score = 30.0 bits (66), Expect(2) = 3e-14 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -3 Query: 214 KFVLQSISSFPSLTPYGDPE 155 KFVL+S+ SFP LTP DP+ Sbjct: 114 KFVLKSVPSFPPLTPCIDPK 133