BLASTX nr result

ID: Coptis25_contig00004019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00004019
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21012.3| unnamed protein product [Vitis vinifera]               79   9e-16
ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261...    79   9e-16
ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|2...    80   8e-15
ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454...    73   3e-14
ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-14

>emb|CBI21012.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score = 79.3 bits (194), Expect(2) = 9e-16
 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -2

Query: 467  SLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQK 291
            SL WR+ PI P   LG +K+ Q  +SD   YDILEDDTP ILKD  TP KAVKAS P QK
Sbjct: 867  SLRWRSSPIPPSTQLGETKIFQGLESDNELYDILEDDTPTILKDASTPTKAVKASSPKQK 926

Query: 290  RVSPPNTRS 264
            RVSPP  +S
Sbjct: 927  RVSPPKIQS 935



 Score = 30.0 bits (66), Expect(2) = 9e-16
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -3

Query: 214  KFVLQSISSFPSLTPYGDPEGSS 146
            KF+LQ++ SFP LTP  D + SS
Sbjct: 952  KFILQAVPSFPPLTPCIDTKSSS 974


>ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera]
          Length = 1001

 Score = 79.3 bits (194), Expect(2) = 9e-16
 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -2

Query: 467  SLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQK 291
            SL WR+ PI P   LG +K+ Q  +SD   YDILEDDTP ILKD  TP KAVKAS P QK
Sbjct: 880  SLRWRSSPIPPSTQLGETKIFQGLESDNELYDILEDDTPTILKDASTPTKAVKASSPKQK 939

Query: 290  RVSPPNTRS 264
            RVSPP  +S
Sbjct: 940  RVSPPKIQS 948



 Score = 30.0 bits (66), Expect(2) = 9e-16
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -3

Query: 214  KFVLQSISSFPSLTPYGDPEGSS 146
            KF+LQ++ SFP LTP  D + SS
Sbjct: 965  KFILQAVPSFPPLTPCIDTKSSS 987


>ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|222855587|gb|EEE93134.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score = 79.7 bits (195), Expect(2) = 8e-15
 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -2

Query: 470 ASLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQ 294
           +SL W + PITPM  LG +K  Q  DSD G YDILEDDTP+ILKD+  PI +VKAS PN+
Sbjct: 735 SSLHWYSSPITPMTRLGETK-NQAQDSDCGLYDILEDDTPEILKDSSAPITSVKASSPNK 793

Query: 293 KRVSPPNT 270
           KRVSPP++
Sbjct: 794 KRVSPPHS 801



 Score = 26.6 bits (57), Expect(2) = 8e-15
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 214 KFVLQSISSFPSLTP 170
           KF+L+S+ SFP LTP
Sbjct: 821 KFILKSVPSFPPLTP 835


>ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1,
           putative [Ricinus communis]
          Length = 873

 Score = 72.8 bits (177), Expect(2) = 3e-14
 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = -2

Query: 467 SLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPNQK 291
           S+ W   PITPM  LG +K+ Q  DSD G Y+ILEDDTP+ILK+  TP  +VKAS PN+K
Sbjct: 762 SVRWWNSPITPMTRLGENKI-QGHDSDSGLYNILEDDTPEILKEGSTPSASVKASSPNKK 820

Query: 290 RVSPP 276
           RVSPP
Sbjct: 821 RVSPP 825



 Score = 31.6 bits (70), Expect(2) = 3e-14
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 268 DHLHNXXXXXXXXXXXXRKFVLQSISSFPSLTPYGDPEG 152
           +H+H+            RKF+L+S+ SFP LTP  + EG
Sbjct: 827 NHIHDFRSSSSGGLKSGRKFILRSVPSFPPLTPCVNSEG 865


>ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|222866282|gb|EEF03413.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 74.3 bits (181), Expect(2) = 3e-14
 Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
 Frame = -2

Query: 473 SASLCWRTLPITPMNALGGSKLRQ*FDSDIG-YDILEDDTPDILKDTHTPIKAVKASFPN 297
           S SL WR+ PITPM  LG +K  Q  DS  G YDILED TP+I K++ TP+ +VKAS P+
Sbjct: 29  SGSLQWRSSPITPMTRLGETKT-QALDSGCGLYDILEDGTPEIFKESPTPVTSVKASSPH 87

Query: 296 QKRVSPP 276
           +KRVSPP
Sbjct: 88  KKRVSPP 94



 Score = 30.0 bits (66), Expect(2) = 3e-14
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 214 KFVLQSISSFPSLTPYGDPE 155
           KFVL+S+ SFP LTP  DP+
Sbjct: 114 KFVLKSVPSFPPLTPCIDPK 133


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