BLASTX nr result

ID: Coptis25_contig00003719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003719
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   431   e-118
emb|CBI23596.3| unnamed protein product [Vitis vinifera]              430   e-118
ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   425   e-116
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   424   e-116
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116

>ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
            [Vitis vinifera]
          Length = 368

 Score =  431 bits (1109), Expect = e-118
 Identities = 212/364 (58%), Positives = 271/364 (74%), Gaps = 5/364 (1%)
 Frame = +1

Query: 64   EKMTLDYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIP 243
            E M  +YDR  E+ AFDD+KAGVKGLVDAGV K+PR+FI P   L + SV+TN + L+IP
Sbjct: 8    EGMDSEYDRKSELIAFDDSKAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTN-AQLRIP 66

Query: 244  LIDLEGIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEV 423
            +IDLEG++ D   R K++D+V  A E WG FQIVNHGI    L+E+I+G+ RFNEQDTEV
Sbjct: 67   IIDLEGVNSDAILRAKIIDKVRNACEIWGIFQIVNHGILKCVLEEMIKGIRRFNEQDTEV 126

Query: 424  KKKFYTRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTK 603
            KK+FYTRD+SKKV F SN DLF +  A W+D+ SC +AP  P P ++P VCRD+ +EY+K
Sbjct: 127  KKEFYTRDFSKKVTFVSNFDLFQAPAATWKDSFSCIIAPNPPDPTDMPAVCRDIIMEYSK 186

Query: 604  CATTLGETLLQLLSEALGLKANYLKELDCSKSFTLVTHYSPTCPEPELTMGSESHTDPAF 783
                L  TL +L++EALGL +N+LK+++C++   LV+HY P CPEPELTMG+++HTDP F
Sbjct: 187  QVKMLANTLFELVAEALGLNSNHLKDMECAEGLFLVSHYYPACPEPELTMGTKTHTDPTF 246

Query: 784  LTVLLQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGG 963
            LTVLLQD +GGLQV H+ QWV+V P+PGALVIN GDLLQL+SND +RS +HRVLAN   G
Sbjct: 247  LTVLLQDQVGGLQVLHEKQWVNVNPVPGALVINTGDLLQLVSNDMFRSAKHRVLANHK-G 305

Query: 964  PRISVAFFFSTVSEATEKRYGPIKELLSDENPPIYREILVKDF-----VERFTYGKPTLE 1128
            PR+SVA FFS  S  + K YGPIKELLS++NPP Y+E   +D+      ER   G   L+
Sbjct: 306  PRVSVASFFSPFSLPSSKLYGPIKELLSEDNPPKYKETTARDYGTCHRAERLD-GTSALQ 364

Query: 1129 HFKL 1140
            HF L
Sbjct: 365  HFML 368


>emb|CBI23596.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  430 bits (1105), Expect = e-118
 Identities = 212/362 (58%), Positives = 270/362 (74%), Gaps = 5/362 (1%)
 Frame = +1

Query: 70   MTLDYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIPLI 249
            M  +YDR  E+ AFDD+KAGVKGLVDAGV K+PR+FI P   L + SV+TN + L+IP+I
Sbjct: 1    MDSEYDRKSELIAFDDSKAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTN-AQLRIPII 59

Query: 250  DLEGIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEVKK 429
            DLEG++ D   R K++D+V  A E WG FQIVNHGI  + L+E+I+G+ RFNEQDTEVKK
Sbjct: 60   DLEGVNSDAILRAKIIDKVRNACEIWGIFQIVNHGILKSVLEEMIKGIRRFNEQDTEVKK 119

Query: 430  KFYTRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTKCA 609
            +FYTRD SKKV+F SN DLF +  A W+D+ SC + P  P P ++P VCRD+ +EY+K  
Sbjct: 120  EFYTRDSSKKVKFVSNFDLFQAPAATWKDSFSCIINPNPPDPTDMPAVCRDIIMEYSKQV 179

Query: 610  TTLGETLLQLLSEALGLKANYLKELDCSKSFTLVTHYSPTCPEPELTMGSESHTDPAFLT 789
              L  TL +L++EALGL +N+LK+++C++   LV+HY P CPEPELTMG+++HTDP FLT
Sbjct: 180  KMLANTLFELVAEALGLNSNHLKDMECAEGLFLVSHYYPACPEPELTMGTKTHTDPTFLT 239

Query: 790  VLLQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGGPR 969
            VLLQD +GGLQV H+ QWV+V P+PGALVIN GDLLQL+SND +RS +HRVLAN   GPR
Sbjct: 240  VLLQDQVGGLQVLHEKQWVNVNPVPGALVINTGDLLQLVSNDMFRSAKHRVLANHK-GPR 298

Query: 970  ISVAFFFSTVSEATEKRYGPIKELLSDENPPIYREILVKDF-----VERFTYGKPTLEHF 1134
            +SVA FFS  S    K YGPIKELLS+ENPP Y+E   +D+      ER   G   L+HF
Sbjct: 299  VSVASFFSPSSLPPSKLYGPIKELLSEENPPKYKETTARDYGTYHRAERLG-GTSALQHF 357

Query: 1135 KL 1140
            KL
Sbjct: 358  KL 359


>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis
            vinifera]
          Length = 364

 Score =  425 bits (1093), Expect = e-116
 Identities = 209/358 (58%), Positives = 269/358 (75%), Gaps = 4/358 (1%)
 Frame = +1

Query: 79   DYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIPLIDLE 258
            DYDR  E+KAFD++KAGVKGLVDAGV ++PRIFI+P   L K+    N +  K P+IDL+
Sbjct: 12   DYDRASELKAFDESKAGVKGLVDAGVSQVPRIFIQP---LEKSRANVN-TQFKFPVIDLQ 67

Query: 259  GIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEVKKKFY 438
            G+D D  +R+++VD+V  ASETWGFF ++NHGIP T L+E++ GV RF EQDTE+K++FY
Sbjct: 68   GMDTDRVQRKQIVDKVREASETWGFFNVLNHGIPVTVLEEMMNGVRRFYEQDTELKQEFY 127

Query: 439  TRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTKCATTL 618
            TRD S+K+ +NSN DL+T++ A WRDT  C MAP  P P +LP  CRD+ +EY +    L
Sbjct: 128  TRDVSRKLVYNSNFDLYTAKAASWRDTFYCLMAPHPPNPQDLPAACRDILMEYKEQVMKL 187

Query: 619  GETLLQLLSEALGLKANYLKELDCSKSFTLVTHYSPTCPEPELTMGSESHTDPAFLTVLL 798
            G  LL+L+SEALGL  N+LK +DC++   +V HY P CP+PELT+G+  HTD  FLTVLL
Sbjct: 188  GFKLLELMSEALGLNPNHLKGMDCAEGLAMVCHYYPACPQPELTLGTGFHTDNDFLTVLL 247

Query: 799  QDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGGPRISV 978
            QD IGGLQV H++QWVDV P+PGALVIN+GDLLQLI+ND+++SVEHRVLAN T GPR+S+
Sbjct: 248  QDQIGGLQVLHQDQWVDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHT-GPRVSI 306

Query: 979  AFFFSTVSEATEKRYGPIKELLSDENPPIYREILVKDFVERF----TYGKPTLEHFKL 1140
            A FFST  + + K YGPIKELLS+ENP  YRE  V D+V  F      G   L+ F+L
Sbjct: 307  ACFFSTSVQPSSKLYGPIKELLSEENPARYRETTVSDYVAHFQEKGLEGSTALQLFRL 364


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis
            vinifera] gi|147807864|emb|CAN66433.1| hypothetical
            protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  424 bits (1089), Expect = e-116
 Identities = 210/359 (58%), Positives = 266/359 (74%), Gaps = 5/359 (1%)
 Frame = +1

Query: 79   DYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSDLKIPLIDLE 258
            DYDR  E+KAFD++K GVKGLVDAGV K+PR+FI+P      +++ T  +    P++DL+
Sbjct: 13   DYDRASELKAFDESKTGVKGLVDAGVSKVPRMFIQP-----PDNLRTYTTQFNFPVVDLQ 67

Query: 259  GIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQDTEVKKKFY 438
            G+D D  RR K+VD V  ASETWGFF +VNHGIP + L+E++EGVLRF EQDTEVKK+FY
Sbjct: 68   GMDNDPIRRNKIVDMVKDASETWGFFNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFY 127

Query: 439  TRDYS-KKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTIEYTKCATT 615
            TRD S KK+ +NSN DL+T+  A WRDT  C MAP  P P+ELP  CRD+ +EY      
Sbjct: 128  TRDASRKKMVYNSNFDLYTAPAANWRDTFYCLMAPHPPNPEELPAACRDILMEYKDQIMR 187

Query: 616  LGETLLQLLSEALGLKANYLKELDCSKSFTLVTHYSPTCPEPELTMGSESHTDPAFLTVL 795
            LG  L +L+SEALGL  N+LK++DC++  +++ HY P+CP+PELTMG+  H D  FLTVL
Sbjct: 188  LGFKLFELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVL 247

Query: 796  LQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQLISNDKYRSVEHRVLANKTGGPRIS 975
            LQD IGGLQV H+ QW+DV P+PGALVIN+GDLLQLI+ND+++SVEHRVLAN   GPR+S
Sbjct: 248  LQDQIGGLQVLHQGQWIDVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHI-GPRVS 306

Query: 976  VAFFFSTVSEATEKRYGPIKELLSDENPPIYREILVKDFVERFTY----GKPTLEHFKL 1140
            VA FFST  + + K YGPIKELLS+ENPP Y+E  V D+V  F      G   L HF+L
Sbjct: 307  VACFFSTSIQPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGLDGTSALPHFRL 365


>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  423 bits (1087), Expect = e-116
 Identities = 215/374 (57%), Positives = 273/374 (72%), Gaps = 11/374 (2%)
 Frame = +1

Query: 52   ACEEEKMTLDYDRLKEVKAFDDTKAGVKGLVDAGVVKLPRIFIRPNGELAKNSVTTNLSD 231
            A E       YDR  E+KAFD+TKAGVKGLVDAGV K+P+IFI P+  L   +++T+ + 
Sbjct: 7    AAEISVQETSYDRGSELKAFDETKAGVKGLVDAGVSKVPQIFIHPSERLEHRTLSTSKNP 66

Query: 232  LKIPLIDLEGIDKDEKRRQKVVDEVGRASETWGFFQIVNHGIPTTTLDEIIEGVLRFNEQ 411
            + + +IDLE IDKD  RR+ +VD+V  ASETWGFFQ+VNHGIP   L+E+  GV RF EQ
Sbjct: 67   VNVTVIDLEAIDKDPIRRKGIVDKVRDASETWGFFQVVNHGIPVGVLEEMDAGVRRFFEQ 126

Query: 412  DTEVKKKFYTRDYSKKVRFNSNLDLFTSRFACWRDTLSCSMAPTQPQPDELPQVCRDVTI 591
            D EVKKKFYTRD +K+  +NSN DL T+  A WRDT    MAP  P+P+ELP  CRD+ +
Sbjct: 127  DVEVKKKFYTRDVTKRFVYNSNFDLHTAPVANWRDTFFSYMAPYPPKPEELPGACRDIMM 186

Query: 592  EYTKCATTLGETLLQLLSEALGLKANYLKELDCSKSFTLVTHYSPTCPEPELTMGSESHT 771
            E++K  T+LG +L  LLSEALGLK ++L+++DC++   L++HY P CPEPELT+G+  H+
Sbjct: 187  EFSKQVTSLGISLFGLLSEALGLKTDHLEKMDCAEGLALISHYYPACPEPELTLGTSKHS 246

Query: 772  DPAFLTVLLQDNIGGLQVFHKNQWVDVQPIPGALVINIGDLLQ-------LISNDKYRSV 930
            D  FLTVLLQD IGGLQ+ H++QWVD+ P+PGALVINIGDL+Q       LISNDK++SV
Sbjct: 247  DNDFLTVLLQDQIGGLQMLHQDQWVDIPPVPGALVINIGDLMQASFSFISLISNDKFKSV 306

Query: 931  EHRVLANKTGGPRISVAFFFSTVSEATEKRYGPIKELLSDENPPIYREILVKDFVERF-- 1104
            EHRVLAN+  GPRISVA FFST  + + K YGPIKELLS+ NPPIYRE  V +++  F  
Sbjct: 307  EHRVLANRV-GPRISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYLSYFYD 365

Query: 1105 --TYGKPTLEHFKL 1140
                G   L HFKL
Sbjct: 366  HGLDGTSPLIHFKL 379


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