BLASTX nr result

ID: Coptis25_contig00003440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003440
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325535.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_002521787.1| hydrolase, putative [Ricinus communis] gi|22...   365   2e-98
ref|XP_002264796.2| PREDICTED: carboxymethylenebutenolidase homo...   363   5e-98
emb|CAN78196.1| hypothetical protein VITISV_008800 [Vitis vinifera]   363   5e-98
ref|XP_003527587.1| PREDICTED: carboxymethylenebutenolidase homo...   329   8e-88

>ref|XP_002325535.1| predicted protein [Populus trichocarpa] gi|222862410|gb|EEE99916.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  374 bits (960), Expect = e-101
 Identities = 172/252 (68%), Positives = 210/252 (83%)
 Frame = +1

Query: 277  NKHSRVYSSQVKLEDDVDDEACELVSGAEVILGEDTDSFRAYLLTAVKNNNGTGVLILSD 456
            N   R  SS +K+EDD+DDEACELVSG E+ +GE  DS  AYLL A+KNNNGTG+L+LSD
Sbjct: 38   NTACRASSSLLKIEDDIDDEACELVSGLEISIGEGDDSIDAYLLKAMKNNNGTGILLLSD 97

Query: 457  VYGFEASSTRDFAYRVACNGYNVLIPDLFRGNPWTSDRSRSEFDDWVERQPAERVAKDIN 636
            ++GFE SSTRDFAYRVACNGYNVLIPDLFRG+PWT D+  +  + W+ +Q  +RVAKDI+
Sbjct: 98   IFGFEDSSTRDFAYRVACNGYNVLIPDLFRGDPWTKDQPMTLLEKWITKQEPQRVAKDID 157

Query: 637  SSAKWMIDEFLAAGISKKLGIIGFCFGGGRLIDTLARDQGSCFSTAVCFYGTHMDLSIAA 816
            +SAKWM+DEFLAAGISKKLGIIGFCFGGGR+ID L+RDQG+ F   V FYGT M+ S+A+
Sbjct: 158  TSAKWMVDEFLAAGISKKLGIIGFCFGGGRVIDALSRDQGALFGVGVSFYGTRMNPSLAS 217

Query: 817  IIKVPILFISGDSDPLCPIDILQDFKSSIGGGSRVVVFKGQGHAFVHRPESPEADKDAEE 996
             IKVP+LFISGD+DPLC + +L+DF+ SIG GS+VV+F+G+GH F HRP SPE DKDA+E
Sbjct: 218  SIKVPVLFISGDNDPLCTVSVLKDFEKSIGQGSKVVIFEGRGHGFAHRPNSPEEDKDADE 277

Query: 997  AFMIMRNWLHDG 1032
            AF I+R WLHDG
Sbjct: 278  AFTIIRKWLHDG 289


>ref|XP_002521787.1| hydrolase, putative [Ricinus communis] gi|223539000|gb|EEF40597.1|
            hydrolase, putative [Ricinus communis]
          Length = 351

 Score =  365 bits (936), Expect = 2e-98
 Identities = 170/265 (64%), Positives = 214/265 (80%)
 Frame = +1

Query: 235  KSNFSHQRCLYHSRNKHSRVYSSQVKLEDDVDDEACELVSGAEVILGEDTDSFRAYLLTA 414
            K N   QR    + N   +V+ + +K+EDD++DEACELV+G E+ LGE  D+  AYL TA
Sbjct: 51   KYNLGPQRS--STENVARQVFCNLLKVEDDINDEACELVNGVELSLGEGVDTISAYLFTA 108

Query: 415  VKNNNGTGVLILSDVYGFEASSTRDFAYRVACNGYNVLIPDLFRGNPWTSDRSRSEFDDW 594
            VKNNNGTGVL+LSD++GFE SSTRDFAYR+ACNGYNVL+PDLF G+PWT DR ++  + W
Sbjct: 109  VKNNNGTGVLLLSDIFGFEDSSTRDFAYRLACNGYNVLVPDLFCGDPWTKDRPKAMLEQW 168

Query: 595  VERQPAERVAKDINSSAKWMIDEFLAAGISKKLGIIGFCFGGGRLIDTLARDQGSCFSTA 774
            + +Q  +RVAKDI ++AKWM DEFLAAGISKKLGIIGFCFGGGR+I+ L+RDQG+CF   
Sbjct: 169  IAKQEPQRVAKDIATAAKWMADEFLAAGISKKLGIIGFCFGGGRVIEVLSRDQGACFGIG 228

Query: 775  VCFYGTHMDLSIAAIIKVPILFISGDSDPLCPIDILQDFKSSIGGGSRVVVFKGQGHAFV 954
            V FYGT MD S+A+ IKVP+LFISG+SDPLC +++L+D +  IG  SRVV+F+G+GH F 
Sbjct: 229  VSFYGTRMDPSLASEIKVPVLFISGNSDPLCSVNVLKDIEKDIGQRSRVVIFQGRGHGFA 288

Query: 955  HRPESPEADKDAEEAFMIMRNWLHD 1029
            HRP SPE DKDAE+AF+IMRNWL+D
Sbjct: 289  HRPNSPEEDKDAEQAFVIMRNWLYD 313


>ref|XP_002264796.2| PREDICTED: carboxymethylenebutenolidase homolog [Vitis vinifera]
            gi|296089525|emb|CBI39344.3| unnamed protein product
            [Vitis vinifera]
          Length = 312

 Score =  363 bits (932), Expect = 5e-98
 Identities = 164/254 (64%), Positives = 209/254 (82%)
 Frame = +1

Query: 271  SRNKHSRVYSSQVKLEDDVDDEACELVSGAEVILGEDTDSFRAYLLTAVKNNNGTGVLIL 450
            ++N   RV S QVK+ED VDDEACELV+G E+ +GE  DS  AYLL AVKNNNGTG+L+L
Sbjct: 54   TKNTACRVSSGQVKVEDSVDDEACELVNGVELSIGEGDDSINAYLLKAVKNNNGTGILLL 113

Query: 451  SDVYGFEASSTRDFAYRVACNGYNVLIPDLFRGNPWTSDRSRSEFDDWVERQPAERVAKD 630
            SDV+GFE SSTRDFAYRVACNGYNVL+PDLFRGNPW  D+ +  F  W+  Q  +RVA+D
Sbjct: 114  SDVFGFEDSSTRDFAYRVACNGYNVLVPDLFRGNPWVKDQPKIMFQQWLATQDRQRVARD 173

Query: 631  INSSAKWMIDEFLAAGISKKLGIIGFCFGGGRLIDTLARDQGSCFSTAVCFYGTHMDLSI 810
            I+ S KW++DEF+AAG+++KLG+IGFCFGGGR+ID LA+DQG+ F T V FYGT ++ S 
Sbjct: 174  IDMSVKWLVDEFIAAGVTEKLGVIGFCFGGGRVIDVLAQDQGAHFGTGVSFYGTRINPSA 233

Query: 811  AAIIKVPILFISGDSDPLCPIDILQDFKSSIGGGSRVVVFKGQGHAFVHRPESPEADKDA 990
            AA +KVP+LFISGD DPLCP+++L+D + SIG GSR+V+F+G+GH F HRPESPE D+DA
Sbjct: 234  AANVKVPVLFISGDEDPLCPVNLLKDIEKSIGRGSRLVIFEGRGHGFAHRPESPEDDEDA 293

Query: 991  EEAFMIMRNWLHDG 1032
            E+AF ++R+WL +G
Sbjct: 294  EQAFAVLRSWLQEG 307


>emb|CAN78196.1| hypothetical protein VITISV_008800 [Vitis vinifera]
          Length = 342

 Score =  363 bits (932), Expect = 5e-98
 Identities = 164/254 (64%), Positives = 209/254 (82%)
 Frame = +1

Query: 271  SRNKHSRVYSSQVKLEDDVDDEACELVSGAEVILGEDTDSFRAYLLTAVKNNNGTGVLIL 450
            ++N   RV S QVK+ED VDDEACELV+G E+ +GE  DS  AYLL AVKNNNGTG+L+L
Sbjct: 65   TKNTACRVSSGQVKVEDSVDDEACELVNGVELSIGEGDDSINAYLLKAVKNNNGTGILLL 124

Query: 451  SDVYGFEASSTRDFAYRVACNGYNVLIPDLFRGNPWTSDRSRSEFDDWVERQPAERVAKD 630
            SDV+GFE SSTRDFAYRVACNGYNVL+PDLFRGNPW  D+ +  F  W+  Q  +RVA+D
Sbjct: 125  SDVFGFEDSSTRDFAYRVACNGYNVLVPDLFRGNPWVKDQPKIMFQQWLATQDRQRVARD 184

Query: 631  INSSAKWMIDEFLAAGISKKLGIIGFCFGGGRLIDTLARDQGSCFSTAVCFYGTHMDLSI 810
            I+ S KW++DEF+AAG+++KLG+IGFCFGGGR+ID LA+DQG+ F T V FYGT ++ S 
Sbjct: 185  IDMSVKWLVDEFIAAGVTEKLGVIGFCFGGGRVIDVLAQDQGAHFGTGVSFYGTRINPSA 244

Query: 811  AAIIKVPILFISGDSDPLCPIDILQDFKSSIGGGSRVVVFKGQGHAFVHRPESPEADKDA 990
            AA +KVP+LFISGD DPLCP+++L+D + SIG GSR+V+F+G+GH F HRPESPE D+DA
Sbjct: 245  AANVKVPVLFISGDEDPLCPVNLLKDIEKSIGRGSRLVIFEGRGHGFAHRPESPEDDEDA 304

Query: 991  EEAFMIMRNWLHDG 1032
            E+AF ++R+WL +G
Sbjct: 305  EQAFAVLRSWLQEG 318


>ref|XP_003527587.1| PREDICTED: carboxymethylenebutenolidase homolog [Glycine max]
          Length = 310

 Score =  329 bits (844), Expect = 8e-88
 Identities = 151/249 (60%), Positives = 194/249 (77%), Gaps = 1/249 (0%)
 Frame = +1

Query: 286  SRVYSSQVKLEDDVDDEACELVSGAEVILGEDTDSFRAYLLTAVKNNNGTGVLILSDVYG 465
            S++  S V +ED +DDEACELVSG E+ L E  ++ RAYL  AVKNNNGTG+L+LSDV+G
Sbjct: 58   SKISCSLVNVEDGIDDEACELVSGVELSLEEGDENIRAYLFKAVKNNNGTGLLLLSDVFG 117

Query: 466  FEASSTRDFAYRVACNGYNVLIPDLFRGNPWTSDRSRSE-FDDWVERQPAERVAKDINSS 642
            FE S TRDFAYRVACNGYN+L+PDLFRGNPWT D+   + F+ W+ RQ  ER+A+DI   
Sbjct: 118  FEDSFTRDFAYRVACNGYNILVPDLFRGNPWTKDQQDPDVFEKWIARQNPERIAEDITRW 177

Query: 643  AKWMIDEFLAAGISKKLGIIGFCFGGGRLIDTLARDQGSCFSTAVCFYGTHMDLSIAAII 822
             KW++DEF+A GISKKLGIIGFCFGGG+++  LA+DQG+CF T V FYGT +D   A+ I
Sbjct: 178  TKWLVDEFMAVGISKKLGIIGFCFGGGQVLKVLAKDQGACFGTGVSFYGTRIDPLAASDI 237

Query: 823  KVPILFISGDSDPLCPIDILQDFKSSIGGGSRVVVFKGQGHAFVHRPESPEADKDAEEAF 1002
            K P+LFI GD+DPLC +  +++ +  I  GS+VV+F G+GH F HRP SPE D DAE+A+
Sbjct: 238  KAPVLFILGDNDPLCQVSEIENVEKKIASGSKVVLFPGRGHGFAHRPGSPEEDVDAEQAY 297

Query: 1003 MIMRNWLHD 1029
            +IMR+WL+D
Sbjct: 298  VIMRDWLYD 306


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