BLASTX nr result

ID: Coptis25_contig00003389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003389
         (3296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25311.3| unnamed protein product [Vitis vinifera]              863   0.0  
ref|XP_004143591.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   800   0.0  
ref|XP_004163065.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small ...   792   0.0  
ref|XP_003516736.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   763   0.0  
ref|XP_003555627.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   754   0.0  

>emb|CBI25311.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  863 bits (2229), Expect = 0.0
 Identities = 520/910 (57%), Positives = 586/910 (64%), Gaps = 35/910 (3%)
 Frame = -2

Query: 3022 GSTDESVDRRLAKEEKHKNGDRHRPRDFPNDYEES-KREGTRD----EKLSRDESVDRR- 2861
            G    S  R    + KH++ DRHR  D  +  E S +REG+RD    E++ R+   +R  
Sbjct: 57   GDKHRSEKRSSRDDSKHRDADRHRSSDRGSKRERSHEREGSRDRAADEEVKREREGERSH 116

Query: 2860 --LSSHKRRERAESEERVDKSEKRRK--EQNRDKRRFEDMVSKDSTDLNGTVKEEKREEW 2693
                SHKR+ER ESE+R D  EKR +   + R++RRFED V +D  + NG    E+RE  
Sbjct: 117  DSAHSHKRKERGESEDRGDGGEKRIRVSTERRERRRFEDRV-EDVKESNGV---ERRERR 172

Query: 2692 EFKDGVKE------DKIKDVNXXXXXXXXXXXXXXXRAMEEDTRDAEEEKQAGTVKSEKK 2531
            +F+D VKE      D++K+VN                                  KS KK
Sbjct: 173  KFEDRVKEEDLGGFDEVKNVNFDE-------------------------------KSVKK 201

Query: 2530 EFRDEVVDNISQKTGISNRSGSRYDGAGLEPVSMPSNAVSEPSLEPGHSLPTKVSSISTT 2351
            E  +E+ D        SN SGS  +G   EP++M    V E SL P    PTKVSSISTT
Sbjct: 202  EESEELGD------AASNGSGSIGNGVVPEPLNMAPRLVPETSLAPSLPPPTKVSSISTT 255

Query: 2350 NENKGVSVTRSHEVPGKSSTDGTTASAAGKSGSLQTVSVSLDALTKAKETIRKQKVLSET 2171
            NENKGVS+TRSHEVPGKSSTDGTT SAAGKSG+L     SLDAL KAK+           
Sbjct: 256  NENKGVSITRSHEVPGKSSTDGTT-SAAGKSGNL-----SLDALAKAKKA---------- 299

Query: 2170 LRKQKELSEKLKRNPLLNKVPSSNSDARTLVGLNKEGLNASSVQTPL------------- 2030
            L+ QKELSEKLK+ PLLNK  S +SD    +   +E    SS    L             
Sbjct: 300  LQMQKELSEKLKKIPLLNKGASPSSDGSPQLKPKEEVTLPSSTTGKLLGSVPLTTATEAV 359

Query: 2029 ------STSTLPVMPSASAKPSASGVPAVGGITAIPNIEAVKRAQELAARMGFHHDPEFA 1868
                  STSTLP   +AS  PSASGV A+ G+T++PN EAVKRAQELAA+MGF  DPEFA
Sbjct: 360  SLVAMPSTSTLPAAAAASVMPSASGVGALAGLTSMPNFEAVKRAQELAAKMGFRQDPEFA 419

Query: 1867 PVINMFPGQITTDAAVHQKPSKAPVLRLDPLGREIDEHGNVVNLSKPANLSTLKVNINKQ 1688
            P+INMFPGQ+ TD AV QKP+KAPVLRLD LGREIDEHGNVVN+ K  NLSTLKVNINKQ
Sbjct: 420  PLINMFPGQMPTDVAVQQKPAKAPVLRLDALGREIDEHGNVVNMPKLNNLSTLKVNINKQ 479

Query: 1687 KKDAFQILKPELDVDPESNPHFDERMGINKTKLLRPKRMAFQFVEEGKWSKDAXXXXXXX 1508
            KKDAFQILKPELDVDPESNPHFD RMGI+K KLLRPKRM FQFVEEGKWS+DA       
Sbjct: 480  KKDAFQILKPELDVDPESNPHFDSRMGIDKNKLLRPKRMNFQFVEEGKWSRDA------- 532

Query: 1507 XXXXXXXXXXXXXXXXXXXXXXXSQFGXXXXXXXXXXXXXXXXXKSEPDINPNLIEVSER 1328
                                   SQFG                 K+EPDINPNLIEVSER
Sbjct: 533  -----------------EIIKLKSQFGEAQAKELKAKQAQLARAKAEPDINPNLIEVSER 575

Query: 1327 VITREKPKDLIPDVEWWDRSLLLSGEYGDITEGNMIGEDKLKIDKITIYVXXXXXXXXXX 1148
            VI +EKPKD IP+VEWWD   L SG YGD   G  I EDKLK+DKITIY+          
Sbjct: 576  VIIKEKPKDQIPEVEWWDVPFLHSGTYGDTDGG--ITEDKLKMDKITIYLEHPRPIEPPA 633

Query: 1147 XXXXXXXXPMKLTKKEQKKMRTQRRLNKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE 968
                    P+KLTK+EQKK+RTQRRL +EKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE
Sbjct: 634  EPAPPPPQPLKLTKREQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE 693

Query: 967  ATQDPTKLEMEIRTAAAEREQAHVDRNIARKLTPAXXXXXXXXKLFEDPNTLETIVSVYK 788
            ATQDPT+LEMEIR+AAAEREQAHVDRNIARKLTPA        KLF+DPNTLETIVSVYK
Sbjct: 694  ATQDPTRLEMEIRSAAAEREQAHVDRNIARKLTPAERREKKERKLFDDPNTLETIVSVYK 753

Query: 787  INDLSHPQTRFKVDVNAQENRLTGCXXXXXXXXXXXVEGGSKPIKRYGKLMLGRINWXXX 608
            INDLSHPQTRFKVD+NAQENRLTGC           VEGGSKPIKRYGKLML RINW   
Sbjct: 754  INDLSHPQTRFKVDINAQENRLTGCAVISDGISVVVVEGGSKPIKRYGKLMLKRINW-AA 812

Query: 607  XXXXXXXXXXXXDKPVNRCVLVWQGSVAKPSFNRFFVQNHRTDAAARKTFSDAGVAHYWD 428
                        +KP+N CVLVWQGSVAKPSFN+F     RT+AAARK FSDAGV HYWD
Sbjct: 813  AVENEDDDEDENEKPLNSCVLVWQGSVAKPSFNKFNFHQCRTEAAARKIFSDAGVGHYWD 872

Query: 427  LAVNFSDDQI 398
            LAVNFS DQI
Sbjct: 873  LAVNFSGDQI 882


>ref|XP_004143591.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Cucumis
            sativus]
          Length = 923

 Score =  800 bits (2066), Expect = 0.0
 Identities = 477/889 (53%), Positives = 564/889 (63%), Gaps = 17/889 (1%)
 Frame = -2

Query: 3013 DESVDRRLAKEEKH------KNGDRHRPRDFPNDYEESKREGTRDEKLSRDESVDRRLSS 2852
            + S DR  +K EK       + G   R +      EES  E  R+      E +   +  
Sbjct: 101  ERSRDRDSSKREKSNEPRGLREGSEERGKLREVRREESDNEHEREGSF---EPIQNSVRP 157

Query: 2851 HKRRERAESEERVDKSEKRRKEQNRDKRRFEDMVSKDSTDLNGTVKEEKREEWEFKDGVK 2672
            +KR+ER  SE+R D  EKR +             S+   ++NG   +EK+E   F DG K
Sbjct: 158  NKRKERGGSEDRFDGGEKRAR------------ASEVGNEVNGAEMDEKKERRRFADGEK 205

Query: 2671 EDKIKDVNXXXXXXXXXXXXXXXRAMEEDTRDAEEEKQAGTVKSEKKEFRDEVVDNISQK 2492
            ++                     R  EED     +EK     K  + + + +V D   Q 
Sbjct: 206  DEGAN----LSGRGRRDRKRFEDRGKEEDNGGNVDEKHG---KVNEYKSKGDVGDGKVQF 258

Query: 2491 TGISNRSGSRYDGAGLEPVSMPSNAVSEPSLEPGHSLPTKVSSISTTNENKGVSVTRSHE 2312
             G ++   S  +G+ +EP  MPS +V +  L P HSLP KVSSISTTNEN+GVS+TRSHE
Sbjct: 259  GGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVSSISTTNENRGVSITRSHE 318

Query: 2311 VPGKSSTDGTTASAAGKSGSLQTVSVSLDALTKAKETIRKQKVLSETLRKQKELSEKLKR 2132
            V GKSSTDGT+ S AGKSG+L     SLDAL KAK+           L+ QKEL+EKLKR
Sbjct: 319  VHGKSSTDGTS-STAGKSGNL-----SLDALAKAKKA----------LQMQKELAEKLKR 362

Query: 2131 NPLLNKVPSSNSDARTLVGLNKEGLNASSVQTPLSTS------TLPVMPSASAKPSAS-- 1976
             PL+ KV  S+S   ++V L ++    S +  PLST+      +  V+ S+S  PSA+  
Sbjct: 363  IPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANA 422

Query: 1975 ---GVPAVGGITAIPNIEAVKRAQELAARMGFHHDPEFAPVINMFPGQITTDAAVHQKPS 1805
               G+    G+T+IP+IEAVKRAQELAARMGF  DPEFAP+IN+FPG + TD AV QKP+
Sbjct: 423  LDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQKPT 482

Query: 1804 KAPVLRLDPLGREIDEHGNVVNLSKPANLSTLKVNINKQKKDAFQILKPELDVDPESNPH 1625
            KAPVLRLD LGREIDE GNVVN++KP+NLSTLKVNINKQKKDAFQILKPELDVDP+SNPH
Sbjct: 483  KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPH 542

Query: 1624 FDERMGINKTKLLRPKRMAFQFVEEGKWSKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1445
            FDERMGINKTKLLRPKRM+FQFVEEGKWSK+A                            
Sbjct: 543  FDERMGINKTKLLRPKRMSFQFVEEGKWSKEA------------------------ETLK 578

Query: 1444 XXSQFGXXXXXXXXXXXXXXXXXKSEPDINPNLIEVSERVITREKPKDLIPDVEWWDRSL 1265
              S+FG                 K+ PDINPNLIEVSERV+ +EK KD IP++EWWD  L
Sbjct: 579  LRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVV-KEKTKDPIPEIEWWDVPL 637

Query: 1264 LLSGEYGDITEGNMIGEDKLKIDKITIYVXXXXXXXXXXXXXXXXXXPMKLTKKEQKKMR 1085
            L SG Y D+ +G  + +DKL+ DKITIYV                  P+KLTKKEQKK+R
Sbjct: 638  LQSGAYKDLGDG-FVADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLR 696

Query: 1084 TQRRLNKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIRTAAAEREQ 905
            TQRRL KEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLE EIR AAAEREQ
Sbjct: 697  TQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQ 756

Query: 904  AHVDRNIARKLTPAXXXXXXXXKLFEDPNTLETIVSVYKINDLSHPQTRFKVDVNAQENR 725
            AH+DRNIARKLTPA        KLF+D N+LET VSVYKINDLSHPQ RFKVDVNA+ENR
Sbjct: 757  AHIDRNIARKLTPAERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENR 816

Query: 724  LTGCXXXXXXXXXXXVEGGSKPIKRYGKLMLGRINWXXXXXXXXXXXXXXXDKPVNRCVL 545
            LTGC           VEGGSK IKRY KLML RINW               DKP+N+C L
Sbjct: 817  LTGCAVICDGISVLVVEGGSKSIKRYAKLMLRRINW--AASVKEEEEEENDDKPLNKCSL 874

Query: 544  VWQGSVAKPSFNRFFVQNHRTDAAARKTFSDAGVAHYWDLAVNFSDDQI 398
            VWQGSVAK SFNRF +Q   T+AAARK F+DAGV HYWD A+NFSDDQ+
Sbjct: 875  VWQGSVAKSSFNRFSIQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923


>ref|XP_004163065.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein
            Prp3-like [Cucumis sativus]
          Length = 923

 Score =  792 bits (2046), Expect = 0.0
 Identities = 474/889 (53%), Positives = 561/889 (63%), Gaps = 17/889 (1%)
 Frame = -2

Query: 3013 DESVDRRLAKEEKH------KNGDRHRPRDFPNDYEESKREGTRDEKLSRDESVDRRLSS 2852
            + S DR  +K EK       + G   R +      EES  E  R+      E +   +  
Sbjct: 101  ERSRDRDSSKREKSNEPRGLREGSEERGKLREVRREESDNEHEREGSF---EPIQNSVRP 157

Query: 2851 HKRRERAESEERVDKSEKRRKEQNRDKRRFEDMVSKDSTDLNGTVKEEKREEWEFKDGVK 2672
            +KR+ER  SE+R D  EKR +             S+   ++NG   +EK+E   F DG K
Sbjct: 158  NKRKERGGSEDRFDGGEKRAR------------ASEVGNEVNGAEMDEKKERRRFADGEK 205

Query: 2671 EDKIKDVNXXXXXXXXXXXXXXXRAMEEDTRDAEEEKQAGTVKSEKKEFRDEVVDNISQK 2492
            ++                     R  EED     +EK     K  + + + +V D   Q 
Sbjct: 206  DEGAN----LSGRGRRDRKRFEDRGKEEDNGGNVDEKHG---KVNEYKSKGDVGDGKVQF 258

Query: 2491 TGISNRSGSRYDGAGLEPVSMPSNAVSEPSLEPGHSLPTKVSSISTTNENKGVSVTRSHE 2312
             G ++   S  +G+ +EP  MPS +V +  L P HSLP KVSSISTTNEN+GVS+TRSHE
Sbjct: 259  GGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVSSISTTNENRGVSITRSHE 318

Query: 2311 VPGKSSTDGTTASAAGKSGSLQTVSVSLDALTKAKETIRKQKVLSETLRKQKELSEKLKR 2132
            V GKSSTDGT+ S AGKSG+L     SLDAL KAK+           L+ QKEL+EKLKR
Sbjct: 319  VHGKSSTDGTS-STAGKSGNL-----SLDALAKAKKA----------LQMQKELAEKLKR 362

Query: 2131 NPLLNKVPSSNSDARTLVGLNKEGLNASSVQTPLSTS------TLPVMPSASAKPSAS-- 1976
             PL+ KV  S+S   ++V   ++    S +  PLST+      +  V+ S+S  PSA+  
Sbjct: 363  IPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANA 422

Query: 1975 ---GVPAVGGITAIPNIEAVKRAQELAARMGFHHDPEFAPVINMFPGQITTDAAVHQKPS 1805
               G+    G+T+IP+IEAVKRAQELAARMGF  DPEFAP+IN+FPG + TD AV QKP+
Sbjct: 423  LDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQKPT 482

Query: 1804 KAPVLRLDPLGREIDEHGNVVNLSKPANLSTLKVNINKQKKDAFQILKPELDVDPESNPH 1625
            KAPVLRLD LGREIDE GNVVN++KP+NLSTLKVNINK KKDAFQILKPELDVDP+SNPH
Sbjct: 483  KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKXKKDAFQILKPELDVDPDSNPH 542

Query: 1624 FDERMGINKTKLLRPKRMAFQFVEEGKWSKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1445
            FDERMGINKTKLLRPKRM+FQFVEEGKWSK+A                            
Sbjct: 543  FDERMGINKTKLLRPKRMSFQFVEEGKWSKEA------------------------ETLK 578

Query: 1444 XXSQFGXXXXXXXXXXXXXXXXXKSEPDINPNLIEVSERVITREKPKDLIPDVEWWDRSL 1265
              S+FG                 K+ PDINPNLIEVSERV+ +EK KD IP++EWWD  L
Sbjct: 579  LRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVV-KEKTKDPIPEIEWWDVPL 637

Query: 1264 LLSGEYGDITEGNMIGEDKLKIDKITIYVXXXXXXXXXXXXXXXXXXPMKLTKKEQKKMR 1085
            L SG Y D+ +G  + +DKL+ DKITIYV                  P+KLTKKEQKK+R
Sbjct: 638  LQSGAYKDLGDG-FVADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLR 696

Query: 1084 TQRRLNKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIRTAAAEREQ 905
            TQRRL KEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLE EI  AAAEREQ
Sbjct: 697  TQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQ 756

Query: 904  AHVDRNIARKLTPAXXXXXXXXKLFEDPNTLETIVSVYKINDLSHPQTRFKVDVNAQENR 725
            AH+DRNIARKLTPA        KLF+D N+LET VSVYKINDLSHPQ RFKVDVNA+ENR
Sbjct: 757  AHIDRNIARKLTPAERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENR 816

Query: 724  LTGCXXXXXXXXXXXVEGGSKPIKRYGKLMLGRINWXXXXXXXXXXXXXXXDKPVNRCVL 545
            LTGC           VEGGSK IKRY KLML RINW               DKP+N+C L
Sbjct: 817  LTGCAVICDGISVLVVEGGSKSIKRYAKLMLRRINW--AASVKEEEEEENDDKPLNKCSL 874

Query: 544  VWQGSVAKPSFNRFFVQNHRTDAAARKTFSDAGVAHYWDLAVNFSDDQI 398
            VWQGSVAK SFNRF +Q   T+AAARK F+DAGV HYWD A+NFSDDQ+
Sbjct: 875  VWQGSVAKSSFNRFSIQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923


>ref|XP_003516736.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Glycine
            max]
          Length = 832

 Score =  763 bits (1971), Expect = 0.0
 Identities = 466/903 (51%), Positives = 557/903 (61%), Gaps = 32/903 (3%)
 Frame = -2

Query: 3013 DESVDRRLAKEEKHKNGDRHRPRDFPNDYEESK-----REGTRDE-KLSRDES----VDR 2864
            D    RR   +  HK   + R RD   D E S+     REG++D  K++RDE     V+ 
Sbjct: 25   DSDDHRRHRSDRNHKRDHKSRDRDRTYDREGSRDRDYEREGSKDRLKVNRDEGREDLVEP 84

Query: 2863 RLSSH--KRRERAESEERVDKSEK-----RRKEQNRDKRRFEDMVSKDSTDLNGTVKEEK 2705
            RLSSH  KR+ER  SE+R  + +K      RKE  R++R+F D V K+         EE+
Sbjct: 85   RLSSHSHKRKEREHSEDRDYEDKKIRVSEERKEGRRERRKFGDKVKKE---------EEE 135

Query: 2704 REEWEFKDGVKEDKIKDVNXXXXXXXXXXXXXXXRAMEEDTRDAEEEKQAGTVKSEKKEF 2525
             +  +   G+ E K+K                                            
Sbjct: 136  EDGNDNIRGIHEAKVK-------------------------------------------- 151

Query: 2524 RDEVVDNISQKTGISNRSGSRYDGAGLEPVSMPSNAVSEPSLEPGHSLPTKVSSISTTNE 2345
             +EV D  +  +  SN +    +GA   P   P + V E SL P    P KVSS STTNE
Sbjct: 152  -EEVADG-AHGSASSNDTAFIQNGALGSPAVAPMS-VPETSLAPPSCFPIKVSSNSTTNE 208

Query: 2344 NKGVSVTRSHEVPGKSSTDGTTASAAGKSGSLQTVSVSLDALTKAKETIRKQKVLSETLR 2165
            NKGVS+ RSHEV GKSSTDG++ SAAGK+GSL     S+DAL KAK+           L+
Sbjct: 209  NKGVSIIRSHEVTGKSSTDGSS-SAAGKTGSL-----SIDALAKAKKA----------LQ 252

Query: 2164 KQKELSEKLKRNPLLNKVPSSNSDARTLVG-LNKEGLNASSVQTPLSTST---------L 2015
             QKELSEKLK+ P LNK  S NS   + +G +N+  + +S+    L +ST         +
Sbjct: 253  MQKELSEKLKKIPQLNKSSSQNSQGSSNLGSMNESAVPSSAAGVALKSSTSASLGHVANM 312

Query: 2014 PVMPS----ASAKPSASGVPAVGGITA-IPNIEAVKRAQELAARMGFHHDPEFAPVINMF 1850
             + PS    ASA     G  AVG   A +PN+EAV+RAQELAARMGF  DP+FAP+INMF
Sbjct: 313  SMFPSTAFAASANTPVIGTSAVGIPNATLPNLEAVRRAQELAARMGFRQDPQFAPLINMF 372

Query: 1849 PGQITTDAAVHQKPSKAPVLRLDPLGREIDEHGNVVNLSKPANLSTLKVNINKQKKDAFQ 1670
            PGQ+ TD A+ QKP+KAPVLRLD  GREIDE GNV+N++KP NLSTLKVNINKQKK+AF+
Sbjct: 373  PGQMVTDVALLQKPTKAPVLRLDAQGREIDEQGNVINVTKPINLSTLKVNINKQKKEAFE 432

Query: 1669 ILKPELDVDPESNPHFDERMGINKTKLLRPKRMAFQFVEEGKWSKDAXXXXXXXXXXXXX 1490
            IL+P LDVDPESNPHFD  MGINKTKLLRPKRM FQFVEEGKWSKDA             
Sbjct: 433  ILQPVLDVDPESNPHFDASMGINKTKLLRPKRMNFQFVEEGKWSKDAETIKLK------- 485

Query: 1489 XXXXXXXXXXXXXXXXXSQFGXXXXXXXXXXXXXXXXXKSEPDINPNLIEVSERVITREK 1310
                             S+FG                 K+ PDINPNLIE++ERV+ +EK
Sbjct: 486  -----------------SKFGEAQAKEHKAKQAQLAKAKAAPDINPNLIEITERVVIKEK 528

Query: 1309 PKDLIPDVEWWDRSLLLSGEYGDITEGNMIGEDKLKIDKITIYVXXXXXXXXXXXXXXXX 1130
            PKD IP++EWWD  LL SG YGD+  G +IGEDKLKI+KI  YV                
Sbjct: 529  PKDQIPEIEWWDVPLLHSGNYGDVDNG-IIGEDKLKIEKINFYVEHPRPIEPPAEPAPPP 587

Query: 1129 XXPMKLTKKEQKKMRTQRRLNKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPT 950
              P+KLTK+EQKK+RTQRR+ KEK+RQEMIRQG+IEPPKPKVK+SNLMKVLGSEATQDPT
Sbjct: 588  PQPLKLTKQEQKKLRTQRRIAKEKERQEMIRQGVIEPPKPKVKISNLMKVLGSEATQDPT 647

Query: 949  KLEMEIRTAAAEREQAHVDRNIARKLTPAXXXXXXXXKLFEDPNTLETIVSVYKINDLSH 770
            +LE EIRTAAAEREQAH+DRNIARKLTPA        KLF+DPNTLET+VS+Y+INDLSH
Sbjct: 648  RLEKEIRTAAAEREQAHIDRNIARKLTPAELREKKERKLFDDPNTLETLVSLYRINDLSH 707

Query: 769  PQTRFKVDVNAQENRLTGCXXXXXXXXXXXVEGGSKPIKRYGKLMLGRINWXXXXXXXXX 590
            P+ RF+VDVNAQENRLTGC           VEGGSK IKRYGKLML RINW         
Sbjct: 708  PKARFRVDVNAQENRLTGCAVICDGISVVVVEGGSKSIKRYGKLMLRRINWSEVSKEKEE 767

Query: 589  XXXXXXDKPVNRCVLVWQGSVAKPSFNRFFVQNHRTDAAARKTFSDAGVAHYWDLAVNFS 410
                  DKP N+CVLVWQGSVAKPSF RF V +  T+AAARK F DAGV HYWD AVN+ 
Sbjct: 768  NEDSDDDKPANKCVLVWQGSVAKPSFYRFSVHDCITEAAARKVFVDAGVPHYWDQAVNYK 827

Query: 409  DDQ 401
            +D+
Sbjct: 828  EDE 830


>ref|XP_003555627.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Glycine
            max]
          Length = 801

 Score =  754 bits (1946), Expect = 0.0
 Identities = 451/873 (51%), Positives = 537/873 (61%), Gaps = 13/873 (1%)
 Frame = -2

Query: 2980 EKHKNGDRHRPRDFPNDYEESKREGTRDEKLSRDESVDRRLSSHKRRERAESEERVDKSE 2801
            E+H++ D HR       +  S R   RD K SRD    +     +  ER  S  +V + E
Sbjct: 17   ERHRDSDEHR-------HHRSDRNHKRDHK-SRDTEGSK--DKDRAYERESSRSKVKRDE 66

Query: 2800 KRRKEQNRDKRRFEDMVSKDSTDLNGTVKEEKREEWEFKDGVKEDKIKDVNXXXXXXXXX 2621
            +R    +  ++  E     D  D    V +E+RE  +F D VK+                
Sbjct: 67   EREYSHSHKRKEREHSEDMDFLDNKIRVSDERRERRKFGDKVKK---------------- 110

Query: 2620 XXXXXXRAMEEDTRDAEEEKQAGTVKSEKKEFRDEVVDNISQKTGISNRSGSRYDGAGLE 2441
                     EED  DAEEE     V++  +    E V N      + N       GA   
Sbjct: 111  ---------EED--DAEEEDGGDNVRAVHEAKVKEEVTNFKDTASLQN-------GALGS 152

Query: 2440 PVSMPSNAVSEPSLEPGHSLPTKVSSISTTNENKGVSVTRSHEVPGKSSTDGTTASAAGK 2261
            P S+P     E SL P  S+P KVSS  TTNENKG+S+TRSHEV GKSSTDG + S AGK
Sbjct: 153  PASVPP----ETSLTPPSSIPIKVSSNFTTNENKGLSITRSHEVAGKSSTDGPS-STAGK 207

Query: 2260 SGSLQTVSVSLDALTKAKETIRKQKVLSETLRKQKELSEKLKRNPLLNKVPSSNSDARTL 2081
            +GS      S+DAL KAK+           L+ QKELSEKLK+ P LNK  +      + 
Sbjct: 208  TGSF-----SIDALAKAKKA----------LQMQKELSEKLKKIPQLNKSSTQTLQGSSN 252

Query: 2080 VGLNKEG-LNASSVQTPLSTSTLPVM----------PSASAKPSASGVPAVGGITAIPNI 1934
            +G   E  + +S+    L TST   M           +ASA P A+   A G  T +PN 
Sbjct: 253  LGSKTESTMPSSNAGVALITSTSASMGHVANMSISASTASANPPATATSATGTAT-LPNF 311

Query: 1933 EAVKRAQELAARMGFHHDPEFAPVINMFPGQ--ITTDAAVHQKPSKAPVLRLDPLGREID 1760
            EAV+RAQELAAR+GF  DP+FAP+IN FPGQ  + TD A+ QKP+KAPVLRLD  GREID
Sbjct: 312  EAVRRAQELAARLGFRPDPQFAPLINTFPGQNQMVTDVAIPQKPTKAPVLRLDAQGREID 371

Query: 1759 EHGNVVNLSKPANLSTLKVNINKQKKDAFQILKPELDVDPESNPHFDERMGINKTKLLRP 1580
            EHGNVVN++KP+NLSTLKVNINKQKKDAF+ILKP LDVDPESNPHFD  MGINKTKLLRP
Sbjct: 372  EHGNVVNVTKPSNLSTLKVNINKQKKDAFEILKPVLDVDPESNPHFDATMGINKTKLLRP 431

Query: 1579 KRMAFQFVEEGKWSKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQFGXXXXXXXXX 1400
            KRM FQFVEEGKWS+DA                              S+FG         
Sbjct: 432  KRMNFQFVEEGKWSRDAETIKLK------------------------SKFGEAQAKEHKA 467

Query: 1399 XXXXXXXXKSEPDINPNLIEVSERVITREKPKDLIPDVEWWDRSLLLSGEYGDITEGNMI 1220
                    K+ PDINPNLIE++ERV+ +EKPKD IP++EWWD  LL SG YGDI  G  I
Sbjct: 468  KQAQLAKAKAAPDINPNLIEITERVVIKEKPKDQIPEIEWWDVPLLHSGNYGDIDNGT-I 526

Query: 1219 GEDKLKIDKITIYVXXXXXXXXXXXXXXXXXXPMKLTKKEQKKMRTQRRLNKEKDRQEMI 1040
            GEDKLK++KIT YV                  P+KLTK+EQKK+RTQRR+ KEK+RQEMI
Sbjct: 527  GEDKLKMEKITFYVEHPRPIEPPAEPAPPPPQPLKLTKQEQKKLRTQRRIAKEKERQEMI 586

Query: 1039 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEMEIRTAAAEREQAHVDRNIARKLTPAX 860
            RQG+IEPPKPKVK+SNLMKVLG+EATQDPT+LE EIR+AAAEREQAH+DRNIARKLTPA 
Sbjct: 587  RQGVIEPPKPKVKISNLMKVLGTEATQDPTRLEKEIRSAAAEREQAHIDRNIARKLTPAE 646

Query: 859  XXXXXXXKLFEDPNTLETIVSVYKINDLSHPQTRFKVDVNAQENRLTGCXXXXXXXXXXX 680
                   KLF+DPNT+ET+VS+YKINDLSHP+ RF+VDVNAQENRLTGC           
Sbjct: 647  LREKKERKLFDDPNTVETLVSLYKINDLSHPKARFRVDVNAQENRLTGCAVICDGISVVV 706

Query: 679  VEGGSKPIKRYGKLMLGRINWXXXXXXXXXXXXXXXDKPVNRCVLVWQGSVAKPSFNRFF 500
            VEGG+K IKRYGKLML RINW               DKP+N+CVLVWQGSVAKPSFNRF 
Sbjct: 707  VEGGNKSIKRYGKLMLRRINWTDVSKETEENEDSDDDKPINKCVLVWQGSVAKPSFNRFS 766

Query: 499  VQNHRTDAAARKTFSDAGVAHYWDLAVNFSDDQ 401
            V +  T+AA RK F DAGV HYWDLAVN+ +D+
Sbjct: 767  VHDCITEAAGRKVFVDAGVPHYWDLAVNYVEDE 799


Top