BLASTX nr result

ID: Coptis25_contig00003304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003304
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550252.1| PREDICTED: enhancer of rudimentary homolog [...   173   4e-41
ref|XP_004138697.1| PREDICTED: enhancer of rudimentary homolog [...   172   5e-41
ref|XP_002873478.1| hypothetical protein ARALYDRAFT_909041 [Arab...   171   2e-40
ref|NP_568240.1| putative enhancer of rudimentary protein [Arabi...   170   2e-40
ref|XP_003588876.1| Enhancer of rudimentary [Medicago truncatula...   169   4e-40

>ref|XP_003550252.1| PREDICTED: enhancer of rudimentary homolog [Glycine max]
          Length = 102

 Score =  173 bits (438), Expect = 4e-41
 Identities = 80/100 (80%), Positives = 93/100 (93%)
 Frame = +3

Query: 102 SDKHTIILMQSSHHRATRTFMDYNSISQAMDGICGLYERKLKELNPTIRHISYDITDLYN 281
           +++HTIILMQ+S +RATRTFMDY SI+QAMDGIC LYERKLKELNPTIR++SYDITDLYN
Sbjct: 2   ANRHTIILMQTSQNRATRTFMDYESITQAMDGICALYERKLKELNPTIRNLSYDITDLYN 61

Query: 282 FIDGLGDLSALVYDPNLQAYLPYDRQWIKQRTFNHLKKLA 401
           FIDGL D+SALVYD ++ AY+P+DRQWIKQRTF HLKKLA
Sbjct: 62  FIDGLADMSALVYDSSIHAYMPHDRQWIKQRTFQHLKKLA 101


>ref|XP_004138697.1| PREDICTED: enhancer of rudimentary homolog [Cucumis sativus]
           gi|449493309|ref|XP_004159251.1| PREDICTED: enhancer of
           rudimentary homolog [Cucumis sativus]
          Length = 102

 Score =  172 bits (437), Expect = 5e-41
 Identities = 79/100 (79%), Positives = 94/100 (94%)
 Frame = +3

Query: 102 SDKHTIILMQSSHHRATRTFMDYNSISQAMDGICGLYERKLKELNPTIRHISYDITDLYN 281
           +++HTI+LMQ+SH+RATRTFMDY+SISQAMDGICGLYERKLK+LNP IR+I+YDI DLYN
Sbjct: 2   ANRHTILLMQTSHNRATRTFMDYDSISQAMDGICGLYERKLKDLNPAIRNITYDIADLYN 61

Query: 282 FIDGLGDLSALVYDPNLQAYLPYDRQWIKQRTFNHLKKLA 401
           FIDGL D+SALV++ ++QAYLPYDRQWIKQR F HLKKLA
Sbjct: 62  FIDGLADMSALVFEHSIQAYLPYDRQWIKQRIFQHLKKLA 101


>ref|XP_002873478.1| hypothetical protein ARALYDRAFT_909041 [Arabidopsis lyrata subsp.
           lyrata] gi|297319315|gb|EFH49737.1| hypothetical protein
           ARALYDRAFT_909041 [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  171 bits (432), Expect = 2e-40
 Identities = 78/104 (75%), Positives = 94/104 (90%)
 Frame = +3

Query: 99  NSDKHTIILMQSSHHRATRTFMDYNSISQAMDGICGLYERKLKELNPTIRHISYDITDLY 278
           NS +HTIIL+Q+S  RATRTFMDY+SI QAMDGICGLYERKLKE+NP++R++SYDI DLY
Sbjct: 5   NSSRHTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNLSYDIADLY 64

Query: 279 NFIDGLGDLSALVYDPNLQAYLPYDRQWIKQRTFNHLKKLASTS 410
           NFIDGL DLSALVY+ ++ AYLPYDRQWIKQ+ FNHLK++A+ S
Sbjct: 65  NFIDGLADLSALVYEHSISAYLPYDRQWIKQKAFNHLKRIANGS 108


>ref|NP_568240.1| putative enhancer of rudimentary protein [Arabidopsis thaliana]
           gi|2842744|sp|Q96319.1|ERH_ARATH RecName: Full=Enhancer
           of rudimentary homolog gi|1595812|gb|AAC49667.1|
           enhancer of rudimentary homolog ATER [Arabidopsis
           thaliana] gi|26450230|dbj|BAC42233.1| putative enhancer
           of rudimentary [Arabidopsis thaliana]
           gi|28827444|gb|AAO50566.1| unknown protein [Arabidopsis
           thaliana] gi|332004216|gb|AED91599.1| putative enhancer
           of rudimentary protein [Arabidopsis thaliana]
          Length = 109

 Score =  170 bits (431), Expect = 2e-40
 Identities = 78/102 (76%), Positives = 93/102 (91%)
 Frame = +3

Query: 99  NSDKHTIILMQSSHHRATRTFMDYNSISQAMDGICGLYERKLKELNPTIRHISYDITDLY 278
           NS +HTIIL+Q+S  RATRTFMDY+SI QAMDGICGLYERKLKE+NP++R+ISYDI DLY
Sbjct: 5   NSSRHTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIADLY 64

Query: 279 NFIDGLGDLSALVYDPNLQAYLPYDRQWIKQRTFNHLKKLAS 404
           NFIDGL DLSALVYD ++ AYLPYDRQWIKQ+ F+HLK++A+
Sbjct: 65  NFIDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIAN 106


>ref|XP_003588876.1| Enhancer of rudimentary [Medicago truncatula]
           gi|355477924|gb|AES59127.1| Enhancer of rudimentary
           [Medicago truncatula]
          Length = 104

 Score =  169 bits (429), Expect = 4e-40
 Identities = 78/102 (76%), Positives = 91/102 (89%)
 Frame = +3

Query: 96  ANSDKHTIILMQSSHHRATRTFMDYNSISQAMDGICGLYERKLKELNPTIRHISYDITDL 275
           AN + HTIIL+Q+SHHRATRTFMD++SIS A+DGICGLYERKLK+LNP +R+ISYDI DL
Sbjct: 2   ANRNHHTIILLQTSHHRATRTFMDFDSISLAIDGICGLYERKLKDLNPAVRNISYDIMDL 61

Query: 276 YNFIDGLGDLSALVYDPNLQAYLPYDRQWIKQRTFNHLKKLA 401
           YNFIDGL D+SALVYD +  AY PYDR+WIK+RTF HLKKLA
Sbjct: 62  YNFIDGLADMSALVYDGSKHAYFPYDREWIKERTFQHLKKLA 103


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