BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003279
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19296.3| unnamed protein product [Vitis vinifera]              202   4e-50
ref|XP_002285630.1| PREDICTED: transcription initiation factor I...   202   4e-50
ref|XP_003519205.1| PREDICTED: transcription initiation factor I...   201   9e-50
ref|XP_002527359.1| transcription initiation factor iia (tfiia),...   201   1e-49
gb|AFK36634.1| unknown [Lotus japonicus]                              201   1e-49

>emb|CBI19296.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  202 bits (515), Expect = 4e-50
 Identities = 99/106 (93%), Positives = 104/106 (98%)
 Frame = -3

Query: 533 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALETQVKSKVTVK 354
           MATFELYRRSTIGMCLTETLDEMV +GTLSPELAIQVLVQFDKSMTEALE+QVKSKVT+K
Sbjct: 58  MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 117

Query: 353 GHLHTYRFCDNVWTFILQDAVFKNEECQENVGKVKIVACDSKLLTQ 216
           GHLHTYRFCDNVWTFILQDA+FKNEE QENVG+VKIVACDSKLLTQ
Sbjct: 118 GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 163


>ref|XP_002285630.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
           [Vitis vinifera] gi|359492969|ref|XP_003634490.1|
           PREDICTED: transcription initiation factor IIA subunit 2
           isoform 2 [Vitis vinifera] gi|147775910|emb|CAN60284.1|
           hypothetical protein VITISV_015528 [Vitis vinifera]
          Length = 106

 Score =  202 bits (515), Expect = 4e-50
 Identities = 99/106 (93%), Positives = 104/106 (98%)
 Frame = -3

Query: 533 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALETQVKSKVTVK 354
           MATFELYRRSTIGMCLTETLDEMV +GTLSPELAIQVLVQFDKSMTEALE+QVKSKVT+K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60

Query: 353 GHLHTYRFCDNVWTFILQDAVFKNEECQENVGKVKIVACDSKLLTQ 216
           GHLHTYRFCDNVWTFILQDA+FKNEE QENVG+VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 106


>ref|XP_003519205.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Glycine max]
          Length = 106

 Score =  201 bits (512), Expect = 9e-50
 Identities = 98/106 (92%), Positives = 104/106 (98%)
 Frame = -3

Query: 533 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALETQVKSKVTVK 354
           MATFELYRRSTIGMCLTETLDEMV +GTLSPELAIQVLVQFDKSMTEALETQVKSKV++K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 353 GHLHTYRFCDNVWTFILQDAVFKNEECQENVGKVKIVACDSKLLTQ 216
           GHLHTYRFCDNVWTFILQDA+FKNE+ QENVG+VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106


>ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
           [Ricinus communis] gi|223533278|gb|EEF35031.1|
           transcription initiation factor iia (tfiia), gamma
           chain, putative [Ricinus communis]
          Length = 106

 Score =  201 bits (511), Expect = 1e-49
 Identities = 98/106 (92%), Positives = 104/106 (98%)
 Frame = -3

Query: 533 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALETQVKSKVTVK 354
           MATFELYRRSTIGMCLTETLDEMV SGTLSPELAIQVLVQFDKSMTEALE+QVKSKV++K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIK 60

Query: 353 GHLHTYRFCDNVWTFILQDAVFKNEECQENVGKVKIVACDSKLLTQ 216
           GHLHTYRFCDNVWTFILQDA+FKNE+ QENVG+VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106


>gb|AFK36634.1| unknown [Lotus japonicus]
          Length = 106

 Score =  201 bits (510), Expect = 1e-49
 Identities = 98/106 (92%), Positives = 104/106 (98%)
 Frame = -3

Query: 533 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALETQVKSKVTVK 354
           MATFELYRRSTIGMCLTETLDEMV +GTLSPELAIQVLVQFDKSMTEALETQVKSKV++K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60

Query: 353 GHLHTYRFCDNVWTFILQDAVFKNEECQENVGKVKIVACDSKLLTQ 216
           GHLHTYRFCDNVWTFILQDA+FKNE+ QENVG+VKIVACDSKLLTQ
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLTQ 106