BLASTX nr result

ID: Coptis25_contig00003162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00003162
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513438.1| conserved hypothetical protein [Ricinus comm...   162   2e-37
ref|XP_002299252.1| predicted protein [Populus trichocarpa] gi|1...   160   4e-37
emb|CAN83221.1| hypothetical protein VITISV_031365 [Vitis vinifera]   158   2e-36
ref|XP_002285600.1| PREDICTED: uncharacterized protein LOC100262...   158   2e-36
ref|XP_002278550.1| PREDICTED: uncharacterized protein LOC100248...   157   6e-36

>ref|XP_002513438.1| conserved hypothetical protein [Ricinus communis]
           gi|223547346|gb|EEF48841.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 137

 Score =  162 bits (409), Expect = 2e-37
 Identities = 88/137 (64%), Positives = 97/137 (70%), Gaps = 5/137 (3%)
 Frame = +1

Query: 334 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXXADVEN 513
           MGRGRGKGKKLTA   +DDPGSG EE +PA KRRGRPQKPL               D EN
Sbjct: 1   MGRGRGKGKKLTA-GNNDDPGSGEEEKIPAQKRRGRPQKPLKDDIDEEEVEKLEEEDGEN 59

Query: 514 VKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVIT-----DSIKTNGFRQNG 678
            K+   +K+TK P   ENGKKRKR++Q KE SDS+KEENGV T     DS K+NGFR NG
Sbjct: 60  GKACLTSKETKSPIAVENGKKRKRYSQSKEKSDSMKEENGVSTRSSTDDSTKSNGFRHNG 119

Query: 679 SRRKSKPRRAAEAGVEC 729
           SRRKSKPRRAAEAGVEC
Sbjct: 120 SRRKSKPRRAAEAGVEC 136


>ref|XP_002299252.1| predicted protein [Populus trichocarpa] gi|118481982|gb|ABK92922.1|
           unknown [Populus trichocarpa]
           gi|222846510|gb|EEE84057.1| predicted protein [Populus
           trichocarpa]
          Length = 137

 Score =  160 bits (406), Expect = 4e-37
 Identities = 87/137 (63%), Positives = 97/137 (70%), Gaps = 5/137 (3%)
 Frame = +1

Query: 334 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXXADVEN 513
           MGRGRGKGKKLT V+ HDD GSG EE +PA KRRGRPQKPL               +VEN
Sbjct: 1   MGRGRGKGKKLT-VSNHDDTGSGEEEKIPAQKRRGRPQKPLKDDIDEEEVEKIEDEEVEN 59

Query: 514 VKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVIT-----DSIKTNGFRQNG 678
            K+   +K+TK P  AENGKKRKR++Q KE  DSVKEENGV T     DS K+NGFR N 
Sbjct: 60  GKTGITSKETKSPTAAENGKKRKRYSQAKEKPDSVKEENGVGTRSSTDDSTKSNGFRHNR 119

Query: 679 SRRKSKPRRAAEAGVEC 729
           SRRK+KPRRAAEAGVEC
Sbjct: 120 SRRKNKPRRAAEAGVEC 136


>emb|CAN83221.1| hypothetical protein VITISV_031365 [Vitis vinifera]
          Length = 256

 Score =  158 bits (400), Expect = 2e-36
 Identities = 86/139 (61%), Positives = 95/139 (68%), Gaps = 6/139 (4%)
 Frame = +1

Query: 331 IMGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPL--XXXXXXXXXXXXXXAD 504
           IMGRGRGKGKK T + T DDPGSG +E +PAYKRRGRPQKP+                 D
Sbjct: 117 IMGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEED 176

Query: 505 VENVKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVITDS----IKTNGFRQ 672
            EN K    +KD K  AT ENG+KRKR  Q KENSDSVKEENG  T S    +K+ GFRQ
Sbjct: 177 GENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNNDLKSVGFRQ 236

Query: 673 NGSRRKSKPRRAAEAGVEC 729
           NGSRRK+KPRRAAEAGVEC
Sbjct: 237 NGSRRKNKPRRAAEAGVEC 255


>ref|XP_002285600.1| PREDICTED: uncharacterized protein LOC100262168 [Vitis vinifera]
           gi|147828374|emb|CAN73155.1| hypothetical protein
           VITISV_040683 [Vitis vinifera]
          Length = 137

 Score =  158 bits (400), Expect = 2e-36
 Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 5/137 (3%)
 Frame = +1

Query: 334 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPLXXXXXXXXXXXXXXADVEN 513
           MGRGRGKGKKLT VT H+DPGSG EE +PA KRRGRPQKPL               D EN
Sbjct: 1   MGRGRGKGKKLT-VTNHEDPGSGEEEKIPAQKRRGRPQKPLKDEIDEEEVEKIEDEDSEN 59

Query: 514 VKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVIT-----DSIKTNGFRQNG 678
            K    +K+ K  A AENGKKRKR++Q KE  DSVKEENG+ T     DS K+NGFR N 
Sbjct: 60  AKIGISSKEMKSSAAAENGKKRKRYSQAKEKPDSVKEENGIGTRSSTDDSTKSNGFRNNR 119

Query: 679 SRRKSKPRRAAEAGVEC 729
           +RRKSKPRRAAEAGVEC
Sbjct: 120 NRRKSKPRRAAEAGVEC 136


>ref|XP_002278550.1| PREDICTED: uncharacterized protein LOC100248625 [Vitis vinifera]
          Length = 139

 Score =  157 bits (396), Expect = 6e-36
 Identities = 85/138 (61%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
 Frame = +1

Query: 334 MGRGRGKGKKLTAVTTHDDPGSGAEEVLPAYKRRGRPQKPL--XXXXXXXXXXXXXXADV 507
           MGRGRGKGKK T + T DDPGSG +E +PAYKRRGRPQKP+                 D 
Sbjct: 1   MGRGRGKGKKQTVIATRDDPGSGEDEKIPAYKRRGRPQKPVKDDVEEEEEAEKVAIEEDG 60

Query: 508 ENVKSANLNKDTKVPATAENGKKRKRHTQVKENSDSVKEENGVITDS----IKTNGFRQN 675
           EN K    +KD K  AT ENG+KRKR  Q KENSDSVKEENG  T S    +K+ GFRQN
Sbjct: 61  ENEKGPITSKDAKNQATTENGRKRKRSLQTKENSDSVKEENGTETKSNNNDLKSVGFRQN 120

Query: 676 GSRRKSKPRRAAEAGVEC 729
           GSRRK+KPRRAAEAGVEC
Sbjct: 121 GSRRKNKPRRAAEAGVEC 138


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