BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002848
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21098.3| unnamed protein product [Vitis vinifera]               92   1e-16
ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-13
ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis ...    79   8e-13
sp|Q84VX3.2|ALF4_ARATH RecName: Full=Aberrant root formation pro...    79   8e-13
ref|NP_001154705.1| Aberrant root formation protein 4 [Arabidops...    79   8e-13

>emb|CBI21098.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 52/133 (39%), Positives = 74/133 (55%)
 Frame = +1

Query: 256 VVDALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVXXXXXXXXXXXXXX 435
           VVDALSF LPK V +F  VS +  +I   I+++ ++TCSPRD++ +              
Sbjct: 90  VVDALSFELPKAVAKFACVSGKCLEIVESIVNQFVATCSPRDLIPIFCEALDVPSG---- 145

Query: 436 XXXXXXXXXXXXXXXMCKEPASFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVS 615
                          M K P  + P  + LSKV +S+ RRHFE +KEA+P +L VL+A++
Sbjct: 146 ---------------MSKAPNYYAPFLSGLSKVFLSIPRRHFEQVKEAVPVILSVLKAMT 190

Query: 616 SELDDETQDSYQL 654
           SELDDE  +S  L
Sbjct: 191 SELDDEDTNSEDL 203


>ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score = 79.0 bits (193), Expect(2) = 2e-13
 Identities = 54/160 (33%), Positives = 77/160 (48%)
 Frame = +1

Query: 256 VVDALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVXXXXXXXXXXXXXX 435
           V+DALSF LPK V +F  +S E  +I   I+D  I  CSPRDML +              
Sbjct: 51  VIDALSFELPKAVSKFAGLSNECLRIADSIIDFFIENCSPRDMLPILCEALDSWNG---- 106

Query: 436 XXXXXXXXXXXXXXXMCKEPASFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVS 615
                          M        PL + +SKVL+++QRRHFE +K A+P +L VL+AV 
Sbjct: 107 ---------------MVHAYDFVAPLLSGISKVLLAIQRRHFEQVKVAVPVILNVLKAVC 151

Query: 616 SELDDETQDSYQLNRQLKQCPR*GSRRGISAQIHTALFVK 735
           SE     +D+  +N  ++      S R I A++   +  K
Sbjct: 152 SEF--SARDTECMNLFIRALGIADSIRAICAKLEGRVLEK 189



 Score = 22.3 bits (46), Expect(2) = 2e-13
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 2   ELVEFIDYVHDNTILXXXXXXXXXXXLANQVSKENALKTLNHLLAFISSPS 154
           ELV+FID V D+ +              +   + NA++ L+    F+ SPS
Sbjct: 6   ELVDFIDSVSDSAVSNH----------EDSDEQGNAVEVLSETHKFLLSPS 46


>ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis thaliana]
           gi|28416705|gb|AAO42883.1| At5g11030 [Arabidopsis
           thaliana] gi|110743215|dbj|BAE99498.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004242|gb|AED91625.1| Aberrant root formation
           protein 4 [Arabidopsis thaliana]
          Length = 578

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
 Frame = +1

Query: 256 VVDALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVXXXXXXXXXXXXXX 435
           V+DALSF LPK+  +F  +S    Q+   I+DR +  C+PRDML++              
Sbjct: 93  VIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILCEALDAAR----- 147

Query: 436 XXXXXXXXXXXXXXXMCKEPASF--TPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQA 609
                           C   AS   TPL   LSKV I +QRRH+E +K A+P VL VL+ 
Sbjct: 148 ----------------CYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKD 191

Query: 610 VSSELDDETQDSY 648
           +S E D + +D +
Sbjct: 192 ISLETDVQVEDLF 204


>sp|Q84VX3.2|ALF4_ARATH RecName: Full=Aberrant root formation protein 4
          Length = 626

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
 Frame = +1

Query: 256 VVDALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVXXXXXXXXXXXXXX 435
           V+DALSF LPK+  +F  +S    Q+   I+DR +  C+PRDML++              
Sbjct: 117 VIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILCEALDAAR----- 171

Query: 436 XXXXXXXXXXXXXXXMCKEPASF--TPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQA 609
                           C   AS   TPL   LSKV I +QRRH+E +K A+P VL VL+ 
Sbjct: 172 ----------------CYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKD 215

Query: 610 VSSELDDETQDSY 648
           +S E D + +D +
Sbjct: 216 ISLETDVQVEDLF 228


>ref|NP_001154705.1| Aberrant root formation protein 4 [Arabidopsis thaliana]
           gi|332004244|gb|AED91627.1| Aberrant root formation
           protein 4 [Arabidopsis thaliana]
          Length = 574

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
 Frame = +1

Query: 256 VVDALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVXXXXXXXXXXXXXX 435
           V+DALSF LPK+  +F  +S    Q+   I+DR +  C+PRDML++              
Sbjct: 93  VIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILCEALDAAR----- 147

Query: 436 XXXXXXXXXXXXXXXMCKEPASF--TPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQA 609
                           C   AS   TPL   LSKV I +QRRH+E +K A+P VL VL+ 
Sbjct: 148 ----------------CYHSASTCSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKD 191

Query: 610 VSSELDDETQDSY 648
           +S E D + +D +
Sbjct: 192 ISLETDVQVEDLF 204