BLASTX nr result

ID: Coptis25_contig00002693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002693
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73973.1| hypothetical protein VITISV_023797 [Vitis vinifera]    74   4e-11
ref|YP_588418.1| hypothetical protein ZeamMp173 [Zea mays subsp....    69   1e-09
gb|AFW62556.1| hypothetical protein ZEAMMB73_728251 [Zea mays]         67   5e-09

>emb|CAN73973.1| hypothetical protein VITISV_023797 [Vitis vinifera]
          Length = 291

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 36/47 (76%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +1

Query: 496 WH---LSLIHSARPDAAPFLIIIYRPFFPPGYSRMKIVVCMLDFGCK 627
           WH    S I  AR DAA F IIIYRPFFPPGYSRMKIVVCMLDFGC+
Sbjct: 140 WHGTFRSSIPPARQDAASFFIIIYRPFFPPGYSRMKIVVCMLDFGCR 186


>ref|YP_588418.1| hypothetical protein ZeamMp173 [Zea mays subsp. mays]
           gi|40795085|gb|AAR91129.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 117

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 32/39 (82%), Positives = 33/39 (84%)
 Frame = +1

Query: 511 IHSARPDAAPFLIIIYRPFFPPGYSRMKIVVCMLDFGCK 627
           I  ARPDAAPF IIIYRPFFPP  SRMKIVVCM DFGC+
Sbjct: 45  IKPARPDAAPFRIIIYRPFFPPVPSRMKIVVCMFDFGCR 83


>gb|AFW62556.1| hypothetical protein ZEAMMB73_728251 [Zea mays]
          Length = 137

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +1

Query: 511 IHSARPDAAPFLIIIYRPFFPPGYSRMKIVVCMLDFGCK 627
           I  ARPDA PF IIIYRPFFPP  SRMKIV+CM DFGC+
Sbjct: 45  IKPARPDAVPFRIIIYRPFFPPVPSRMKIVICMFDFGCR 83


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