BLASTX nr result

ID: Coptis25_contig00002563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00002563
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   149   3e-34
ref|XP_002300362.1| multidrug resistance protein ABC transporter...   147   9e-34
ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   143   2e-32
ref|XP_003530787.1| PREDICTED: ABC transporter C family member 3...   141   6e-32
emb|CBI39700.3| unnamed protein product [Vitis vinifera]              140   8e-32

>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527170|gb|EEF29340.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  149 bits (375), Expect = 3e-34
 Identities = 80/137 (58%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1    SKTVIYVTHQVEFLPSADLILVMKDGRITQLGKYEEILNSGTDFLELVGAHEKAXXXXXX 180
            SKTVIYVTHQVEFLP+ADLILVMK+GRITQ GKY +ILNSG+DF+ELV AHE A      
Sbjct: 617  SKTVIYVTHQVEFLPAADLILVMKEGRITQAGKYNDILNSGSDFMELVSAHESALSPLDS 676

Query: 181  XXXXXXXKNVRNKMLNDNMENGKKVELKEDKKNEGDNR-DDIVGPKAQLVXXXXXXKGRV 357
                    N    +  DNM +   V LKE+ K+  + + D+IV PK QLV      KGRV
Sbjct: 677  NQAGSASGN--ESISKDNMSSTNGVPLKEENKDSQNGKMDEIVEPKGQLVQEEEREKGRV 734

Query: 358  GFQVYWKFITTAYGGAL 408
            GF VYWK++TTAYGGAL
Sbjct: 735  GFPVYWKYLTTAYGGAL 751


>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1488

 Score =  147 bits (371), Expect = 9e-34
 Identities = 77/137 (56%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1    SKTVIYVTHQVEFLPSADLILVMKDGRITQLGKYEEILNSGTDFLELVGAHEKAXXXXXX 180
            SKTVIYVTHQVEFLP+ADLILVMKDGRITQ GKY++ILNSG+DF+ELVGAH+ A      
Sbjct: 788  SKTVIYVTHQVEFLPAADLILVMKDGRITQAGKYDDILNSGSDFMELVGAHKAALSAFDS 847

Query: 181  XXXXXXXKNVRNKMLNDNMENGKKVELKEDKKNEGDNRDDIV-GPKAQLVXXXXXXKGRV 357
                   +   N+       +G ++  KE  K+  + ++D+V GPKAQL+      KG V
Sbjct: 848  KQAESASE---NESAGKENSSGDRILQKEGNKDSQNGKEDVVAGPKAQLIQEEEREKGSV 904

Query: 358  GFQVYWKFITTAYGGAL 408
            GF +YWKFITTAYGGAL
Sbjct: 905  GFPIYWKFITTAYGGAL 921


>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/137 (55%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1    SKTVIYVTHQVEFLPSADLILVMKDGRITQLGKYEEILNSGTDFLELVGAHEKAXXXXXX 180
            SKTVIYVTHQVEFLP+ADLILVMKDGR+TQ GKY EILNSGTDF+ELVGAH+KA      
Sbjct: 782  SKTVIYVTHQVEFLPAADLILVMKDGRVTQAGKYNEILNSGTDFMELVGAHKKALLALNS 841

Query: 181  XXXXXXXKNVRNKMLNDNM-ENGKKVELKEDKKNEGDNRDDIVGPKAQLVXXXXXXKGRV 357
                   + +     +DN+    + VE +E++  +    ++I GPK QLV      KG+V
Sbjct: 842  VEAGSLSEKLSILEDSDNIGGTSEVVEKEENRGGQNGKAEEIDGPKGQLVQEEEREKGKV 901

Query: 358  GFQVYWKFITTAYGGAL 408
            G  VYWK+I TAYGGAL
Sbjct: 902  GLWVYWKYIRTAYGGAL 918


>ref|XP_003530787.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1500

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/137 (53%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1    SKTVIYVTHQVEFLPSADLILVMKDGRITQLGKYEEILNSGTDFLELVGAHEKAXXXXXX 180
            SKTV+YVTHQVEFLP+ADLILV+KDG+ITQ GKY ++LNSGTDF+ELVGAH++A      
Sbjct: 796  SKTVVYVTHQVEFLPAADLILVLKDGKITQCGKYNDLLNSGTDFMELVGAHKEALSALDS 855

Query: 181  XXXXXXXKNVRNKMLNDNMENGKKVELKEDKKN-EGDNRDDIVGPKAQLVXXXXXXKGRV 357
                     +     + ++      E KE KK+ +   +DD  GPK QLV      KG+V
Sbjct: 856  LDRGKESDKISTSQQDISVSLSHGAEEKEVKKDAQNGVKDDKCGPKGQLVQEEEREKGKV 915

Query: 358  GFQVYWKFITTAYGGAL 408
            GF VYWK+IT AYGGAL
Sbjct: 916  GFSVYWKYITAAYGGAL 932


>emb|CBI39700.3| unnamed protein product [Vitis vinifera]
          Length = 1020

 Score =  140 bits (354), Expect = 8e-32
 Identities = 77/136 (56%), Positives = 87/136 (63%)
 Frame = +1

Query: 1   SKTVIYVTHQVEFLPSADLILVMKDGRITQLGKYEEILNSGTDFLELVGAHEKAXXXXXX 180
           SKTVIYVTHQVEFLP+ADLILVMKDGRITQ GKY EILNSGTDF+ELVGAH+KA      
Sbjct: 567 SKTVIYVTHQVEFLPAADLILVMKDGRITQAGKYNEILNSGTDFMELVGAHKKAL----- 621

Query: 181 XXXXXXXKNVRNKMLNDNMENGKKVELKEDKKNEGDNRDDIVGPKAQLVXXXXXXKGRVG 360
                         LN         + KE+K  +    ++I GPK QLV      KG+VG
Sbjct: 622 ------------SALNSVEAGSLSEKSKENKGGQNGKAEEIDGPKGQLVQEEEREKGKVG 669

Query: 361 FQVYWKFITTAYGGAL 408
             VYWK+I TAYGGAL
Sbjct: 670 LWVYWKYIRTAYGGAL 685


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