BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001997
         (1992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-contai...   439   e-120
ref|XP_002527268.1| conserved hypothetical protein [Ricinus comm...   437   e-120
ref|XP_002321235.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115
ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-contai...   414   e-113
emb|CBI29719.3| unnamed protein product [Vitis vinifera]              413   e-112

>ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like [Vitis vinifera]
          Length = 401

 Score =  439 bits (1129), Expect = e-120
 Identities = 236/366 (64%), Positives = 276/366 (75%), Gaps = 2/366 (0%)
 Frame = -3

Query: 1528 GNGKATVKRKKLKGKRAVVXXXXXXXXXXXKDYDRMTAEEKILYKLRKARNKETRLTEAL 1349
            G  +  VKRKKLKGKRAVV           K+Y+RMTAEEKILYKLRKAR KE RL EAL
Sbjct: 36   GTVETKVKRKKLKGKRAVVRWLKFFRWKKKKEYERMTAEEKILYKLRKARRKEERLAEAL 95

Query: 1348 KKIEPPDSSEPVHDPEILTPEEHFYFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQ 1169
             KIEP +SSE  HDPEILTPEEHF+FLKMGLK KNYVP+GRRGIYQGVILNMHLHWKKHQ
Sbjct: 96   TKIEPKESSETTHDPEILTPEEHFFFLKMGLKCKNYVPIGRRGIYQGVILNMHLHWKKHQ 155

Query: 1168 TLKVEVKTFSPEEVKEIAVELARLSGGIVLDIQEDNTIIMYRGKNYSQPPTEIMSPKTTL 989
            TL+V VKTFSPEEVKEIAVELARL+GGIVLDI E+NTIIMYRGKNYSQPPTEIMSP+ TL
Sbjct: 156  TLQVVVKTFSPEEVKEIAVELARLTGGIVLDIHEENTIIMYRGKNYSQPPTEIMSPRITL 215

Query: 988  PRIKALNKSKYRDGIRAVRKFIPRXXXXXXXXXXXAKRKQETRSELKDEILENGFCTSTH 809
             R KAL+KSKYRDG+RAVRK+IPR           AK + E ++E  ++       +   
Sbjct: 216  SRKKALDKSKYRDGLRAVRKYIPRLEGDLELLQAQAKMQAENKTEAVEDFQNANIDSINS 275

Query: 808  GSIAD-QQQSSTKMEESKEGNND-FYEDSTTESVINSESEGLSDIFETDSEEETGERAEH 635
              I++ Q ++S K+ E   GNN+   E+S T+S   S SE LSDIFE+DS+ +T E+AE 
Sbjct: 276  QGISNLQPENSDKLRELLAGNNESSEEESLTDSGTESCSEALSDIFESDSDTDTKEKAEQ 335

Query: 634  PLYLDEFEKFPAVSTEVPEDFEEQLRQISLNAKKAGQMKKDVDIIDLDEVDRIFLRAGSL 455
             LYL+EFEKFP  S   PEDFEE LRQIS +++KA  ++KD D+  LDEVD++FLRA SL
Sbjct: 336  LLYLNEFEKFPVESDGEPEDFEEHLRQISADSRKAKSLEKDADLPQLDEVDQMFLRAASL 395

Query: 454  LWKKRR 437
            L KKRR
Sbjct: 396  LKKKRR 401


>ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
            gi|223533361|gb|EEF35112.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 458

 Score =  437 bits (1125), Expect = e-120
 Identities = 242/435 (55%), Positives = 293/435 (67%), Gaps = 9/435 (2%)
 Frame = -3

Query: 1714 FFSSSVV--------VLRKVFDQKSACGSPYRTRRHGLEGFVWIHSTSIRNIVHKATEQV 1559
            FFS S+         ++ KVF Q  A    Y      + G  WIH       + K  E  
Sbjct: 24   FFSDSLTYRTTSLFHIICKVFSQAPAFRPVYVLEGPHIGGHRWIHFGPTLTDIDKDGEPP 83

Query: 1558 NNSENVAATDGNGKATVKRKKLKGKRAVVXXXXXXXXXXXKDYDRMTAEEKILYKLRKAR 1379
              S      +G+G A VKRKKLKGKRAVV           K+Y+RMTAEEK+LYKL+KA+
Sbjct: 84   PLSGQSTMVEGSGCAKVKRKKLKGKRAVVRWLKFFRWKKKKEYERMTAEEKLLYKLKKAQ 143

Query: 1378 NKETRLTEALKKIEPPDSSEPVHDPEILTPEEHFYFLKMGLKSKNYVPVGRRGIYQGVIL 1199
             KE R  +ALKKIEP DSSE  HDPEILTPEEHF+FLKMGLK KNYVPVGRRGIYQGVIL
Sbjct: 144  KKEERYVQALKKIEPVDSSETTHDPEILTPEEHFFFLKMGLKCKNYVPVGRRGIYQGVIL 203

Query: 1198 NMHLHWKKHQTLKVEVKTFSPEEVKEIAVELARLSGGIVLDIQEDNTIIMYRGKNYSQPP 1019
            NMHLHWKKHQT++V VKTFSPEEVKEIA ELARL+GGIVLDI E+NTIIMYRGKNYSQPP
Sbjct: 204  NMHLHWKKHQTVQVVVKTFSPEEVKEIAAELARLTGGIVLDIHEENTIIMYRGKNYSQPP 263

Query: 1018 TEIMSPKTTLPRIKALNKSKYRDGIRAVRKFIPRXXXXXXXXXXXAKRKQETRSELKDEI 839
            TEIMSP+ TL R KAL+KSKYRDG+RAVR +IPR           +  K E  S   +E 
Sbjct: 264  TEIMSPRITLSRKKALDKSKYRDGLRAVRNYIPRLEQDLELLKVQSMGKAECGSASAEET 323

Query: 838  LENGFCTSTHGSIADQQQSSTKMEESKEGNND-FYEDSTTESVINSESEGLSDIFETDSE 662
            L       + G  +   ++S K+++  +G  +   E+S  +  + S+SE LSDIFETDS+
Sbjct: 324  LYTDDGAESGGVPSTPLENSEKLKKITDGQEECSEEESPMDLGMLSDSEDLSDIFETDSD 383

Query: 661  EETGERAEHPLYLDEFEKFPAVSTEVPEDFEEQLRQISLNAKKAGQMKKDVDIIDLDEVD 482
             ET ++ + PLYL+EF+KFP    E PEDFEE LRQ+S++++K    +KD DI   DEVD
Sbjct: 384  TETEDKVKRPLYLEEFKKFPIQGNEEPEDFEEHLRQLSVDSRKVESSEKDSDIPSFDEVD 443

Query: 481  RIFLRAGSLLWKKRR 437
            R+FLRA SLL KK+R
Sbjct: 444  RLFLRAASLLKKKKR 458


>ref|XP_002321235.1| predicted protein [Populus trichocarpa] gi|222862008|gb|EEE99550.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  420 bits (1079), Expect = e-115
 Identities = 236/406 (58%), Positives = 276/406 (67%), Gaps = 9/406 (2%)
 Frame = -3

Query: 1627 LEGFVWIHSTSIRNIVHKATEQVNNSENVAATDGNGKATVKRKKLKGKRAVVXXXXXXXX 1448
            L G +WIHS    N V K  E   N E  AA        VKR KLKGKRAVV        
Sbjct: 20   LVGHLWIHSCPSLNNVDKVVEPTENFEKTAAVFSGSDVKVKRPKLKGKRAVVRWLKFFRW 79

Query: 1447 XXXKDYDRMTAEEKILYKLRKARNKETRLTEALKKIEPPDSSEPVHDPEILTPEEHFYFL 1268
               K+Y+RMTAEEKILYKLRKA+ KE R  +ALKKIEP +SSE  HDPEILTPEEHF+FL
Sbjct: 80   KKKKEYERMTAEEKILYKLRKAQRKEERFVQALKKIEPKESSEATHDPEILTPEEHFFFL 139

Query: 1267 KMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVEVKTFSPEEVKEIAVELARLSGG 1088
            KMGLK KNYVPVGRRGIYQGVILNMHLHWKKHQTLKV VKTF+PEEVKEIA ELAR +GG
Sbjct: 140  KMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFTPEEVKEIAAELARFTGG 199

Query: 1087 IVLDIQEDNTIIMYRGKNYSQPPTEIMSPKTTLPRIKALNKSKYRDGIRAVRKFIPRXXX 908
            IVLDI E+NTIIMYRGKNYSQPPTEIMSP+ TL R KAL+KSK RDG+RA+R++IPR   
Sbjct: 200  IVLDIHEENTIIMYRGKNYSQPPTEIMSPRVTLSRKKALDKSKCRDGLRALRRYIPRLQQ 259

Query: 907  XXXXXXXXAKRKQETRSELKDEILENGFCTSTHGSIADQQQSSTKMEESKEGNNDFYEDS 728
                    A  K +                 +    + Q ++S K++E  +  ++  ED 
Sbjct: 260  DLELLHARAGGKTDIDG------------AESRSISSKQLENSEKLKEIIDRQDEGSEDG 307

Query: 727  -TTESVINSESEGLSDIFETDSEEETGERAEHPLYLDEFEKFPAVSTEVPEDFEEQLRQI 551
              T+  I S+SE LSDIFETDS+ +T E ++ PLYL+EFEKF   +   PEDFEE LRQI
Sbjct: 308  PDTDLGIASDSEDLSDIFETDSDADTEETSKRPLYLEEFEKFSVEADGEPEDFEEHLRQI 367

Query: 550  SLNAKKAGQMKKDVDI---IDL-----DEVDRIFLRAGSLLWKKRR 437
            SL +KK     KDVDI   +D+     DEVDR+FLRA SLL +K+R
Sbjct: 368  SLGSKKGVTSGKDVDIPTGVDVDSPSFDEVDRMFLRAASLLKRKKR 413


>ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
            chloroplastic-like, partial [Glycine max]
          Length = 383

 Score =  414 bits (1065), Expect = e-113
 Identities = 233/383 (60%), Positives = 271/383 (70%), Gaps = 5/383 (1%)
 Frame = -3

Query: 1576 KATEQVNNSENVAAT---DGNGKATVKRKKLKGKRAVVXXXXXXXXXXXKDYDRMTAEEK 1406
            K  EQ +     A++   DG+G A VKR KLKGKRAVV           K+Y+RMTAEEK
Sbjct: 2    KVVEQQHQDSQKASSANVDGDGNAKVKRNKLKGKRAVVRWLKFFRFKKKKEYERMTAEEK 61

Query: 1405 ILYKLRKARNKETRLTEALKKIEPPDSSEPVHDPEILTPEEHFYFLKMGLKSKNYVPVGR 1226
             LYKL KAR KE RL EALKKIEP +SSE  HDPEILTPEEHF+FLKMGLKSKNYVPVGR
Sbjct: 62   NLYKLLKARKKEERLCEALKKIEPAESSETTHDPEILTPEEHFFFLKMGLKSKNYVPVGR 121

Query: 1225 RGIYQGVILNMHLHWKKHQTLKVEVKTFSPEEVKEIAVELARLSGGIVLDIQEDNTIIMY 1046
            RGIYQGVILNMHLHWKKHQTLKV VKTFS EEVKEIA ELARLSGGIVLDI EDNTIIMY
Sbjct: 122  RGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIAAELARLSGGIVLDIHEDNTIIMY 181

Query: 1045 RGKNYSQPPTEIMSPKTTLPRIKALNKSKYRDGIRAVRKFIPRXXXXXXXXXXXAKRKQE 866
            RGKNYSQPPTEIMSP+ +L R KAL+KSKYRD +RAVR++IPR            K   E
Sbjct: 182  RGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQFKSSAE 241

Query: 865  TRSELKDEILENGFCTSTHGSIAD-QQQSSTKMEESKEGNNDFYEDST-TESVINSESEG 692
            + ++  + I  +G  +   GSI++ Q Q+S K  E    N    ED T   S ++S+S+ 
Sbjct: 242  SNTDAAEAIQNSGRESIESGSISNFQLQNSYKDREMMNVNIGSTEDETDMNSELDSDSDK 301

Query: 691  LSDIFETDSEEETGERAEHPLYLDEFEKFPAVSTEVPEDFEEQLRQISLNAKKAGQMKKD 512
            LSDIFETDS+ E   + E PLYLDEF+ FP  S     DFEE +RQ+SL +K    M+KD
Sbjct: 302  LSDIFETDSDTENFVKEEKPLYLDEFDNFPEQSDGEMNDFEEHMRQMSLKSK---NMEKD 358

Query: 511  VDIIDLDEVDRIFLRAGSLLWKK 443
             ++  LDEVD+IFL+A S L KK
Sbjct: 359  DNLPKLDEVDKIFLQATSFLKKK 381


>emb|CBI29719.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score =  413 bits (1061), Expect = e-112
 Identities = 219/331 (66%), Positives = 256/331 (77%), Gaps = 2/331 (0%)
 Frame = -3

Query: 1423 MTAEEKILYKLRKARNKETRLTEALKKIEPPDSSEPVHDPEILTPEEHFYFLKMGLKSKN 1244
            MTAEEKILYKLRKAR KE RL EAL KIEP +SSE  HDPEILTPEEHF+FLKMGLK KN
Sbjct: 1    MTAEEKILYKLRKARRKEERLAEALTKIEPKESSETTHDPEILTPEEHFFFLKMGLKCKN 60

Query: 1243 YVPVGRRGIYQGVILNMHLHWKKHQTLKVEVKTFSPEEVKEIAVELARLSGGIVLDIQED 1064
            YVP+GRRGIYQGVILNMHLHWKKHQTL+V VKTFSPEEVKEIAVELARL+GGIVLDI E+
Sbjct: 61   YVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLDIHEE 120

Query: 1063 NTIIMYRGKNYSQPPTEIMSPKTTLPRIKALNKSKYRDGIRAVRKFIPRXXXXXXXXXXX 884
            NTIIMYRGKNYSQPPTEIMSP+ TL R KAL+KSKYRDG+RAVRK+IPR           
Sbjct: 121  NTIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKYRDGLRAVRKYIPRLEGDLELLQAQ 180

Query: 883  AKRKQETRSELKDEILENGFCTSTHGSIAD-QQQSSTKMEESKEGNND-FYEDSTTESVI 710
            AK + E ++E  ++       +     I++ Q ++S K+ E   GNN+   E+S T+S  
Sbjct: 181  AKMQAENKTEAVEDFQNANIDSINSQGISNLQPENSDKLRELLAGNNESSEEESLTDSGT 240

Query: 709  NSESEGLSDIFETDSEEETGERAEHPLYLDEFEKFPAVSTEVPEDFEEQLRQISLNAKKA 530
             S SE LSDIFE+DS+ +T E+AE  LYL+EFEKFP  S   PEDFEE LRQIS +++KA
Sbjct: 241  ESCSEALSDIFESDSDTDTKEKAEQLLYLNEFEKFPVESDGEPEDFEEHLRQISADSRKA 300

Query: 529  GQMKKDVDIIDLDEVDRIFLRAGSLLWKKRR 437
              ++KD D+  LDEVD++FLRA SLL KKRR
Sbjct: 301  KSLEKDADLPQLDEVDQMFLRAASLLKKKRR 331