BLASTX nr result

ID: Coptis25_contig00001706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001706
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...   125   6e-27
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...   121   1e-25
ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20
ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycin...   102   5e-20
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]   101   1e-19

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  125 bits (315), Expect = 6e-27
 Identities = 58/124 (46%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
 Frame = +3

Query: 135 KRYWRARRYQRLDGTITSKKNMQVARLGGKRKRSWRIRAIPKLKLRFKLVSPIKVLATLR 314
           KRYWR +RYQR DG IT++KN++V R GG  +R W+I+A+PKL++   + SP+K+++ L+
Sbjct: 13  KRYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKLMSKLK 72

Query: 315 DAYINMMIGLEGKVGVLNGTNFFASKRINPKGVK-SSRDSKAEEFEAKLIFEIYKSLMAA 491
           +AYINMM+G+ G V   +GTN F ++R+ P+G +  + +  +E FE +L++EIYK+L+A 
Sbjct: 73  NAYINMMLGMAGNV---DGTNVFGNRRV-PRGRQVKAPNYPSEAFEKRLVYEIYKNLLAT 128

Query: 492 RQLA 503
           R+L+
Sbjct: 129 RELS 132


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  121 bits (304), Expect = 1e-25
 Identities = 57/123 (46%), Positives = 88/123 (71%)
 Frame = +3

Query: 135 KRYWRARRYQRLDGTITSKKNMQVARLGGKRKRSWRIRAIPKLKLRFKLVSPIKVLATLR 314
           KRYWR +RYQRLDG IT++KN  VAR GG  +R+W+I+A+PKL++   + SP K+L  L+
Sbjct: 13  KRYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKLLRKLK 72

Query: 315 DAYINMMIGLEGKVGVLNGTNFFASKRINPKGVKSSRDSKAEEFEAKLIFEIYKSLMAAR 494
           +AYI+M++ + G     +GT+ F  KR+ P+G +      +E FE +L++EIYK+L+A R
Sbjct: 73  NAYISMILSVAGNA---DGTHVFGDKRV-PRGRQVKAAYPSEAFEKRLVYEIYKNLLATR 128

Query: 495 QLA 503
           +L+
Sbjct: 129 ELS 131


>ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|222864955|gb|EEF02086.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  103 bits (257), Expect = 3e-20
 Identities = 55/124 (44%), Positives = 82/124 (66%)
 Frame = +3

Query: 132 LKRYWRARRYQRLDGTITSKKNMQVARLGGKRKRSWRIRAIPKLKLRFKLVSPIKVLATL 311
           +KRYWR  RYQRL+G   SK+ +++ARLG  R+  W++RA+PKL +  ++ SPIK+LA  
Sbjct: 12  VKRYWRRNRYQRLNGA--SKRKLKIARLGSGRR--WKLRAVPKLHM--EIASPIKLLAKF 65

Query: 312 RDAYINMMIGLEGKVGVLNGTNFFASKRINPKGVKSSRDSKAEEFEAKLIFEIYKSLMAA 491
            DAYI+MM+ L   +G LN   FF  K++  K    S  S  +E +++L+ EIYK L A+
Sbjct: 66  HDAYIDMMLRLATNIGSLNNKGFFRGKKV-AKDQHISMVSSGDEVDSRLLLEIYKKLAAS 124

Query: 492 RQLA 503
           R ++
Sbjct: 125 RDMS 128


>ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycine max]
           gi|255629003|gb|ACU14846.1| unknown [Glycine max]
          Length = 135

 Score =  102 bits (255), Expect = 5e-20
 Identities = 59/125 (47%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
 Frame = +3

Query: 129 GLKRYWRARRYQRLDGTITS-KKNMQVARLGGKRKRSWRIRAIPKLKLRFKLVSPIKVLA 305
           G+K Y R RRY+RL G  T  ++ M + RL G R R WRIRA+P+L  R+ + SP+ +L 
Sbjct: 12  GIKSYLRRRRYRRLHGGATVVRRKMAIIRLRGPR-RYWRIRAVPRL--RWVMRSPLTILT 68

Query: 306 TLRDAYINMMIGLEGKVGVLNGTNFFASKRINPKGVKSSRDSKAEEFEAKLIFEIYKSLM 485
            L++AY+N M+ L G VG +N  N F  KRI PK  + S+    +EFEA+LIFEI K+L+
Sbjct: 69  KLKNAYMNFMLKLSGNVGAMNSDNIFEVKRI-PKARQVSKGYSRDEFEARLIFEISKTLV 127

Query: 486 AARQL 500
           A+ +L
Sbjct: 128 ASYEL 132


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score =  101 bits (252), Expect = 1e-19
 Identities = 52/107 (48%), Positives = 74/107 (69%)
 Frame = +3

Query: 129 GLKRYWRARRYQRLDGTITSKKNMQVARLGGKRKRSWRIRAIPKLKLRFKLVSPIKVLAT 308
           G  R+WR  +YQRLD  + +K+N+++ RLGGK++R WRIR IPKL L  K++SP+K+LA 
Sbjct: 11  GFGRHWRRGKYQRLD--VANKRNVKMVRLGGKQRRFWRIRQIPKLHL--KIISPLKLLAK 66

Query: 309 LRDAYINMMIGLEGKVGVLNGTNFFASKRINPKGVKSSRDSKAEEFE 449
           L++AY++MM+ L G VG LN  N F  KR+ PK  +       EEF+
Sbjct: 67  LKNAYVSMMLNLSGSVGALNSGNVFGGKRV-PKARQVPIAYSNEEFD 112


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