BLASTX nr result
ID: Coptis25_contig00001490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001490
(2310 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27297.3| unnamed protein product [Vitis vinifera] 200 1e-48
ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-bin... 200 1e-48
ref|XP_003552573.1| PREDICTED: LOW QUALITY PROTEIN: putative G3B... 196 3e-47
gb|ACU19575.1| unknown [Glycine max] 196 3e-47
ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|2... 192 3e-46
>emb|CBI27297.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 200 bits (509), Expect = 1e-48
Identities = 120/237 (50%), Positives = 147/237 (62%), Gaps = 1/237 (0%)
Frame = -1
Query: 1857 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 1678
M T+ S+P GP A++VGN FVEQYY +L+ SP+LVYRFY DSSVLSRPGPDG M +V T
Sbjct: 3 MQTEDSSP-GPS-AEVVGNVFVEQYYLVLYQSPELVYRFYHDSSVLSRPGPDGVMTTVTT 60
Query: 1677 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 1498
+ IN +ILS DYK KAEI T DAQ SYK GVVV VTG L KDNV+RKFTQSFFLAPQ
Sbjct: 61 SEGINDMILSFDYKGHKAEILTADAQFSYKDGVVVLVTGCLTGKDNVRRKFTQSFFLAPQ 120
Query: 1497 DKGYFVLNDIFRYVDEYETVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTT 1318
D GYFVLND+FRY+DE E++ + +AVN +H+ +HP NT+
Sbjct: 121 DNGYFVLNDVFRYMDERESLMVE--TIAVNDVNENSPVAPLTPEPESTHVLDHPKSNNTS 178
Query: 1317 PEVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVHSGQDEVLPVTEPASTV-PEDTP 1150
P VE + E V + ++N +V PV+E S V ED P
Sbjct: 179 P-VEEDAADDEEVCDLTENEGVPVSEEKVVCEIPVDPSKDVHPVSETVSAVINEDAP 234
Score = 77.4 bits (189), Expect = 2e-11
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = -3
Query: 850 EVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRSTNKQXXXXXXXXXXXESLES 671
EV G+SIY+ +LPLNA+V +VE FK FG I GIQ+RS ESL+S
Sbjct: 334 EVGGHSIYIGNLPLNATVQQVEGVFKKFGPIISGGIQIRS----YKGYGFGFVEFESLDS 389
Query: 670 VKSALKASPITFGDRQVYIEEKRTSTRVG 584
+ SA+KASPIT G Q IE+K+T+ RVG
Sbjct: 390 MHSAIKASPITIGGHQATIEQKKTTLRVG 418
>ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
[Vitis vinifera]
Length = 486
Score = 200 bits (509), Expect = 1e-48
Identities = 120/237 (50%), Positives = 147/237 (62%), Gaps = 1/237 (0%)
Frame = -1
Query: 1857 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 1678
M T+ S+P GP A++VGN FVEQYY +L+ SP+LVYRFY DSSVLSRPGPDG M +V T
Sbjct: 3 MQTEDSSP-GPS-AEVVGNVFVEQYYLVLYQSPELVYRFYHDSSVLSRPGPDGVMTTVTT 60
Query: 1677 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 1498
+ IN +ILS DYK KAEI T DAQ SYK GVVV VTG L KDNV+RKFTQSFFLAPQ
Sbjct: 61 SEGINDMILSFDYKGHKAEILTADAQFSYKDGVVVLVTGCLTGKDNVRRKFTQSFFLAPQ 120
Query: 1497 DKGYFVLNDIFRYVDEYETVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEHPMPENTT 1318
D GYFVLND+FRY+DE E++ + +AVN +H+ +HP NT+
Sbjct: 121 DNGYFVLNDVFRYMDERESLMVE--TIAVNDVNENSPVAPLTPEPESTHVLDHPKSNNTS 178
Query: 1317 PEVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVHSGQDEVLPVTEPASTV-PEDTP 1150
P VE + E V + ++N +V PV+E S V ED P
Sbjct: 179 P-VEEDAADDEEVCDLTENEGVPVSEEKVVCEIPVDPSKDVHPVSETVSAVINEDAP 234
Score = 80.5 bits (197), Expect = 2e-12
Identities = 46/89 (51%), Positives = 59/89 (66%)
Frame = -3
Query: 850 EVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRSTNKQXXXXXXXXXXXESLES 671
EV G+SIY+ +LPLNA+V +VE FK FG I GIQ+RS +Q ESL+S
Sbjct: 334 EVGGHSIYIGNLPLNATVQQVEGVFKKFGPIISGGIQIRSYKQQ--GYGFGFVEFESLDS 391
Query: 670 VKSALKASPITFGDRQVYIEEKRTSTRVG 584
+ SA+KASPIT G Q IE+K+T+ RVG
Sbjct: 392 MHSAIKASPITIGGHQATIEQKKTTLRVG 420
>ref|XP_003552573.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
[Glycine max]
Length = 461
Score = 196 bits (497), Expect = 3e-47
Identities = 111/206 (53%), Positives = 129/206 (62%), Gaps = 7/206 (3%)
Frame = -1
Query: 1857 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 1678
MA Q + P AQ+VGNAFVEQYYHILH SPDLVYRFYQDSSV+SRP G M SV T
Sbjct: 1 MALQTATPPTTPSAQVVGNAFVEQYYHILHHSPDLVYRFYQDSSVISRPDSSGVMTSVTT 60
Query: 1677 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 1498
M IN ILS+++KE KAEIKT DAQ SYK GV V VTG L KDN++RKF QSFFLAPQ
Sbjct: 61 MKGINEKILSLNFKEFKAEIKTADAQKSYKEGVTVLVTGCLTGKDNLRRKFAQSFFLAPQ 120
Query: 1497 DKGYFVLNDIFRYVDEYE-------TVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEH 1339
D GYFVLND+FRYV+++E T + DA AV V SH +
Sbjct: 121 DNGYFVLNDVFRYVEDHEPSELPPVTGDGDAAAVTVT------------PEPEPSHFADS 168
Query: 1338 PMPENTTPEVEVSYGNGEVVHEPSDN 1261
P+ T V E +EPS++
Sbjct: 169 SAPDPTNSHVNKGQTVAENAYEPSNH 194
Score = 98.2 bits (243), Expect = 9e-18
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Frame = -3
Query: 853 EEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRSTNKQXXXXXXXXXXXESLE 674
EEVEG+SIY+++LPLN + +++E EFK FG I+P GIQVR+ +Q SL
Sbjct: 295 EEVEGHSIYIRNLPLNVTAAQLELEFKKFGPIKPGGIQVRNNKQQ--GYCFGFVEFLSLN 352
Query: 673 SVKSALKASPITFGDRQVYIEEKRTSTRVG----ATGKPRYPP 557
S+ SA++ASP+ G RQ +E KRT+TRVG +TG+PR PP
Sbjct: 353 SMNSAIQASPVPIGGRQAVVEIKRTTTRVGSGINSTGRPRIPP 395
>gb|ACU19575.1| unknown [Glycine max]
Length = 461
Score = 196 bits (497), Expect = 3e-47
Identities = 111/206 (53%), Positives = 129/206 (62%), Gaps = 7/206 (3%)
Frame = -1
Query: 1857 MATQASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVKT 1678
MA Q + P AQ+VGNAFVEQYYHILH SPDLVYRFYQDSSV+SRP G M SV T
Sbjct: 1 MALQTATPPTTPSAQVVGNAFVEQYYHILHHSPDLVYRFYQDSSVISRPDSSGVMTSVTT 60
Query: 1677 MDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAPQ 1498
M IN ILS+++KE KAEIKT DAQ SYK GV V VTG L KDN++RKF QSFFLAPQ
Sbjct: 61 MKGINEKILSLNFKEFKAEIKTADAQKSYKEGVTVLVTGCLTGKDNLRRKFAQSFFLAPQ 120
Query: 1497 DKGYFVLNDIFRYVDEYE-------TVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEH 1339
D GYFVLND+FRYV+++E T + DA AV V SH +
Sbjct: 121 DNGYFVLNDVFRYVEDHEPSELPPVTGDGDAAAVTVT------------PEPEPSHFADS 168
Query: 1338 PMPENTTPEVEVSYGNGEVVHEPSDN 1261
P+ T V E +EPS++
Sbjct: 169 SAPDPTNSHVNKGQTVAENAYEPSNH 194
Score = 98.2 bits (243), Expect = 9e-18
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Frame = -3
Query: 853 EEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRSTNKQXXXXXXXXXXXESLE 674
EEVEG+SIY+++LPLN + +++E EFK FG I+P GIQVR+ +Q SL
Sbjct: 295 EEVEGHSIYIRNLPLNVTAAQLELEFKKFGPIKPGGIQVRNNKQQ--GYCFGFVEFLSLN 352
Query: 673 SVKSALKASPITFGDRQVYIEEKRTSTRVG----ATGKPRYPP 557
S+ SA++ASP+ G RQ +E KRT+TRVG +TG+PR PP
Sbjct: 353 SMNSAIQASPVPIGGRQAVVEIKRTTTRVGSGINSTGRPRIPP 395
>ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|222867121|gb|EEF04252.1|
predicted protein [Populus trichocarpa]
Length = 458
Score = 192 bits (489), Expect = 3e-46
Identities = 116/237 (48%), Positives = 141/237 (59%), Gaps = 1/237 (0%)
Frame = -1
Query: 1857 MATQ-ASNPTGPHPAQMVGNAFVEQYYHILHTSPDLVYRFYQDSSVLSRPGPDGKMASVK 1681
MA Q ASNPT P AQ+VGNAFVEQYY+IL TSP+ V+RFYQDSSVLSRP +G + SV
Sbjct: 1 MALQTASNPTLPS-AQVVGNAFVEQYYYILLTSPESVHRFYQDSSVLSRPDANGVVTSVT 59
Query: 1680 TMDDINVVILSMDYKECKAEIKTIDAQDSYKGGVVVQVTGWLIVKDNVKRKFTQSFFLAP 1501
TM IN ILS+D+K+CKAEIKT DAQ SYK GV V VTG KDNVKRKF QSFFLAP
Sbjct: 60 TMQGINEKILSLDFKDCKAEIKTADAQISYKDGVTVLVTGCFTGKDNVKRKFAQSFFLAP 119
Query: 1500 QDKGYFVLNDIFRYVDEYETVESDAVAVAVNGXXXXXXXXXXXXXXXXSHIPEHPMPENT 1321
QD GYFVLND+FRYVD+ E++ES + +H+P+ P+
Sbjct: 120 QDSGYFVLNDVFRYVDDNESLESH-----LGHGVDSNPIVPSIPDQEPAHVPDPSAPDPL 174
Query: 1320 TPEVEVSYGNGEVVHEPSDNGXXXXXXXXXXXXXVHSGQDEVLPVTEPASTVPEDTP 1150
VE E +E SD+ + + + V +S + ED P
Sbjct: 175 PSVVEEHKKLAEKANESSDHEKQLVNDREIIVEDLSDENNVPVVVESVSSMIQEDAP 231
Score = 85.1 bits (209), Expect = 7e-14
Identities = 43/91 (47%), Positives = 62/91 (68%)
Frame = -3
Query: 853 EEVEGYSIYVKSLPLNASVSEVEEEFKTFGKIRPNGIQVRSTNKQXXXXXXXXXXXESLE 674
EEVEG+SIY+++LP N +VS++E EF+ FG I+ G+QVR +Q S
Sbjct: 297 EEVEGHSIYIRNLPFNLTVSQLEAEFEKFGPIKEGGVQVRYNRQQ--GYCFGFVEFHSPN 354
Query: 673 SVKSALKASPITFGDRQVYIEEKRTSTRVGA 581
S+ SA++ASP+T G RQ+ +E KRT+TRVG+
Sbjct: 355 SMNSAIEASPMTIGGRQIVVEMKRTNTRVGS 385