BLASTX nr result

ID: Coptis25_contig00001479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001479
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615749.1| NBS-LRR resistance protein [Medicago truncat...    63   3e-08
ref|XP_003615650.1| NBS-LRR resistance protein [Medicago truncat...    62   5e-08
ref|XP_003615744.1| Cc-nbs-lrr resistance protein [Medicago trun...    61   8e-08
ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocar...    61   1e-07
ref|XP_003613689.1| NBS-LRR resistance protein [Medicago truncat...    60   2e-07

>ref|XP_003615749.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355517084|gb|AES98707.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 1013

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/74 (48%), Positives = 44/74 (59%)
 Frame = -2

Query: 226 MAEAILSVVLDQLTSFIRNXXXXXXXXXXXXXXXLNNLHTHLTLIKAVLEDAEKKEIHDN 47
           MAEA+L VV + L S ++N                  L T L LIKAVLEDAEKK+I D 
Sbjct: 1   MAEALLGVVFENLLSLVQNEFATISGIKSKAL----KLSTTLDLIKAVLEDAEKKQITDR 56

Query: 46  AVKVWLGQLKDVMY 5
           ++KVWL QLKD +Y
Sbjct: 57  SIKVWLQQLKDAIY 70


>ref|XP_003615650.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355516985|gb|AES98608.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 1169

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/74 (47%), Positives = 44/74 (59%)
 Frame = -2

Query: 226 MAEAILSVVLDQLTSFIRNXXXXXXXXXXXXXXXLNNLHTHLTLIKAVLEDAEKKEIHDN 47
           MA A+L VV + L S ++N                  L T L LIKAVLEDAEKK++ D 
Sbjct: 1   MANALLGVVFENLMSLLQNEFSTISGIKSKA----EKLSTTLDLIKAVLEDAEKKQVTDR 56

Query: 46  AVKVWLGQLKDVMY 5
           ++KVWL QLKDV+Y
Sbjct: 57  SIKVWLQQLKDVVY 70


>ref|XP_003615744.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355517079|gb|AES98702.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1090

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = -2

Query: 226 MAEAILSVVLDQLTSFIRNXXXXXXXXXXXXXXXLNNLHTHLTLIKAVLEDAEKKEIHDN 47
           MAEA+L VV + L S ++N                  L T L LIKAVLEDAE+K++ D 
Sbjct: 1   MAEALLGVVFENLLSLVQNEFATISGITSKA----EKLSTTLDLIKAVLEDAEQKQVTDR 56

Query: 46  AVKVWLGQLKDVMY 5
           ++KVWL QLKD +Y
Sbjct: 57  SIKVWLQQLKDAVY 70


>ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832447|gb|EEE70924.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 614

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)
 Frame = -2

Query: 226 MAEAILSVVLDQLTSFIRNXXXXXXXXXXXXXXXLNNLHTHLTLIKAVLEDAEKKEIHDN 47
           MAEA+LS +L+QLT  +                 ++ L ++L +I++VLEDAE+K++ D 
Sbjct: 1   MAEALLSPILEQLTKIVAQQVHEEVTLVGGVKKQVDKLKSNLIVIQSVLEDAERKQVKDK 60

Query: 46  AVKVWLGQLKDVMYD 2
           AV+ W+ +LKDV YD
Sbjct: 61  AVRDWVDKLKDVCYD 75


>ref|XP_003613689.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355515024|gb|AES96647.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 647

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/74 (47%), Positives = 43/74 (58%)
 Frame = -2

Query: 226 MAEAILSVVLDQLTSFIRNXXXXXXXXXXXXXXXLNNLHTHLTLIKAVLEDAEKKEIHDN 47
           MAEA+L VV + L S ++N                  L T L LIKAVLEDAE K++ D 
Sbjct: 1   MAEALLGVVFENLLSLVQNEIATTFGIKSKV----EKLSTTLDLIKAVLEDAEHKQVTDR 56

Query: 46  AVKVWLGQLKDVMY 5
           + KVWL QLKDV+Y
Sbjct: 57  SNKVWLQQLKDVVY 70


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