BLASTX nr result

ID: Coptis25_contig00001471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001471
         (1476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A,...   450   e-124
ref|XP_002310373.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121
gb|ABK95225.1| unknown [Populus trichocarpa]                          441   e-121
emb|CBI24768.3| unnamed protein product [Vitis vinifera]              437   e-120
gb|AFK47398.1| unknown [Lotus japonicus]                              436   e-120

>ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A, putative [Ricinus
            communis] gi|223526810|gb|EEF29030.1| Late embryogenesis
            abundant protein Lea14-A, putative [Ricinus communis]
          Length = 313

 Score =  450 bits (1157), Expect = e-124
 Identities = 216/279 (77%), Positives = 246/279 (88%)
 Frame = +1

Query: 370  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 549
            GGFIDKVKDFI +IGEKIEEA+GFGKPTADVTG+HIPSI L+KADIVVDV          
Sbjct: 25   GGFIDKVKDFIHDIGEKIEEAIGFGKPTADVTGVHIPSINLEKADIVVDVLIKNPNPVPI 84

Query: 550  XXXXXXXXVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 729
                    +ES GRKL+SGLIPDAGTI AHG ETVKIP+TL+YDDIKNTYDDI+PGSIIP
Sbjct: 85   PLVDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPVTLIYDDIKNTYDDIQPGSIIP 144

Query: 730  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 909
            Y+IKV+LI+DVP+FGRLTLPLEKTGEIPIPYKPD+D+EKI F++FSFEETVA+LH+KLEN
Sbjct: 145  YRIKVDLIIDVPVFGRLTLPLEKTGEIPIPYKPDIDLEKIHFERFSFEETVAVLHVKLEN 204

Query: 910  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1089
            MNDFDLGLN L  E+WLS VSIGGA+L ES+KI+K GISYID+PITFRPKD GSA+WDMI
Sbjct: 205  MNDFDLGLNGLDYEVWLSDVSIGGAELAESTKIEKKGISYIDIPITFRPKDFGSALWDMI 264

Query: 1090 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1206
            RG+GTGY++KG I+VDTPFGAMKLPISKEGGTT +KKNK
Sbjct: 265  RGKGTGYTMKGHINVDTPFGAMKLPISKEGGTTRLKKNK 303


>ref|XP_002310373.1| predicted protein [Populus trichocarpa] gi|222853276|gb|EEE90823.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  441 bits (1133), Expect = e-121
 Identities = 212/279 (75%), Positives = 243/279 (87%)
 Frame = +1

Query: 370  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 549
            GGFIDKVKDFIQ+IGEKIE A+GFGKPTADVT IH P+I L+KA+IVVDV          
Sbjct: 24   GGFIDKVKDFIQDIGEKIEGAIGFGKPTADVTEIHFPTINLEKAEIVVDVLIKNPNPVPI 83

Query: 550  XXXXXXXXVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 729
                    +ES GRKL+SGLIPDAGTI AHG ETVKIPI L+YDDIKNTYDDIKPGSIIP
Sbjct: 84   PLIDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPIHLVYDDIKNTYDDIKPGSIIP 143

Query: 730  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 909
            Y+IKV+ IVDVPIFGRLTLPLEKTGEIP+PYKPD+D+EKI F++FSFEETVA+LHLKLEN
Sbjct: 144  YRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYKPDIDIEKIKFERFSFEETVAVLHLKLEN 203

Query: 910  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1089
             NDFDLGLN+L  E+WLS VSIGGA+L ES+K+DKNGI+Y+D+PITF+PKD GSA+WDMI
Sbjct: 204  KNDFDLGLNSLDYEVWLSNVSIGGAELAESTKLDKNGINYVDIPITFKPKDFGSALWDMI 263

Query: 1090 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1206
            RG+GTGYS+KG I+VDTPFGAMKLPISKEGGTT +KK+K
Sbjct: 264  RGKGTGYSMKGHINVDTPFGAMKLPISKEGGTTRLKKSK 302


>gb|ABK95225.1| unknown [Populus trichocarpa]
          Length = 314

 Score =  441 bits (1133), Expect = e-121
 Identities = 212/279 (75%), Positives = 243/279 (87%)
 Frame = +1

Query: 370  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 549
            GGFIDKVKDFIQ+IGEKIE A+GFGKPTADVT IH P+I L+KA+IVVDV          
Sbjct: 24   GGFIDKVKDFIQDIGEKIEGAIGFGKPTADVTEIHFPTINLEKAEIVVDVLIKNPNPVPI 83

Query: 550  XXXXXXXXVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 729
                    +ES GRKL+SGLIPDAGTI AHG ETVKIPI L+YDDIKNTYDDIKPGSIIP
Sbjct: 84   PLIDINYLIESDGRKLISGLIPDAGTIRAHGEETVKIPIHLVYDDIKNTYDDIKPGSIIP 143

Query: 730  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 909
            Y+IKV+ IVDVPIFGRLTLPLEKTGEIP+PYKPD+D+EKI F++FSFEETVA+LHLKLEN
Sbjct: 144  YRIKVDFIVDVPIFGRLTLPLEKTGEIPVPYKPDIDIEKIKFERFSFEETVAVLHLKLEN 203

Query: 910  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1089
             NDFDLGLN+L  E+WLS VSIGGA+L ES+K+DKNGI+Y+D+PITF+PKD GSA+WDMI
Sbjct: 204  KNDFDLGLNSLDYEVWLSNVSIGGAELAESTKLDKNGINYVDIPITFKPKDFGSALWDMI 263

Query: 1090 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1206
            RG+GTGYS+KG I+VDTPFGAMKLPISKEGGTT +KK+K
Sbjct: 264  RGKGTGYSMKGHINVDTPFGAMKLPISKEGGTTRLKKSK 302


>emb|CBI24768.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  437 bits (1123), Expect = e-120
 Identities = 215/308 (69%), Positives = 253/308 (82%)
 Frame = +1

Query: 283  GMSSSENPQXXXXXXXXXXXXXXXXXXXXGGFIDKVKDFIQNIGEKIEEAVGFGKPTADV 462
            GMSSS+ P+                    GGFI+KVKDFI +IGEKIEEA+GFGKPTADV
Sbjct: 85   GMSSSDKPEEVVERDAKEKDDKNEEK---GGFIEKVKDFIHDIGEKIEEAIGFGKPTADV 141

Query: 463  TGIHIPSITLKKADIVVDVXXXXXXXXXXXXXXXXXXVESAGRKLVSGLIPDAGTIHAHG 642
            TGIHIP I L++ADIV+DV                  +ES GRKLVSGLIPDAGTI+AHG
Sbjct: 142  TGIHIPKINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAGTINAHG 201

Query: 643  SETVKIPITLMYDDIKNTYDDIKPGSIIPYKIKVELIVDVPIFGRLTLPLEKTGEIPIPY 822
            SETVKIP++L+YDDIKNTY DIKPGSIIPYKIKV LIVDVP+FGRLTLPLEKTGEIPIPY
Sbjct: 202  SETVKIPVSLIYDDIKNTYSDIKPGSIIPYKIKVNLIVDVPVFGRLTLPLEKTGEIPIPY 261

Query: 823  KPDVDVEKISFKKFSFEETVALLHLKLENMNDFDLGLNALSSEIWLSGVSIGGAKLTESS 1002
            KPD+D+EK+ F+ FSFEETVA+LHLKL+N NDFDLGLN L  E+WL+ VSIGGA+L++S+
Sbjct: 262  KPDIDLEKVQFQSFSFEETVAVLHLKLDNKNDFDLGLNGLDYEVWLADVSIGGAELSKSA 321

Query: 1003 KIDKNGISYIDLPITFRPKDLGSAVWDMIRGRGTGYSIKGDIDVDTPFGAMKLPISKEGG 1182
            KI+KNGIS I+LPITFRP++ GSA+WDMIRG+GTGY++KG+IDVDTPFGAMKLPISKEGG
Sbjct: 322  KIEKNGISCIELPITFRPREFGSALWDMIRGKGTGYTMKGNIDVDTPFGAMKLPISKEGG 381

Query: 1183 TTSIKKNK 1206
            +T +KK+K
Sbjct: 382  STRLKKDK 389


>gb|AFK47398.1| unknown [Lotus japonicus]
          Length = 322

 Score =  436 bits (1122), Expect = e-120
 Identities = 211/279 (75%), Positives = 240/279 (86%)
 Frame = +1

Query: 370  GGFIDKVKDFIQNIGEKIEEAVGFGKPTADVTGIHIPSITLKKADIVVDVXXXXXXXXXX 549
            GGFI+KVKDFI +IGEKIEEA+GFGKPTADV+GIHIPSI + K D+VVDV          
Sbjct: 32   GGFIEKVKDFIHDIGEKIEEAIGFGKPTADVSGIHIPSINIHKVDLVVDVLIKNPNPVPI 91

Query: 550  XXXXXXXXVESAGRKLVSGLIPDAGTIHAHGSETVKIPITLMYDDIKNTYDDIKPGSIIP 729
                    +ES GRKLVSGLIPDAGTIHAHG ETVKIP+TL+YDDIK TY DIKPGSIIP
Sbjct: 92   PLIDINYLIESDGRKLVSGLIPDAGTIHAHGEETVKIPVTLIYDDIKQTYADIKPGSIIP 151

Query: 730  YKIKVELIVDVPIFGRLTLPLEKTGEIPIPYKPDVDVEKISFKKFSFEETVALLHLKLEN 909
            Y++KV+LI DVPI GRLTLPLEKTGEIPIPYKPD+DV+KI F+KFSFEET+A LHLKLEN
Sbjct: 152  YRVKVDLIFDVPILGRLTLPLEKTGEIPIPYKPDIDVDKIQFEKFSFEETIANLHLKLEN 211

Query: 910  MNDFDLGLNALSSEIWLSGVSIGGAKLTESSKIDKNGISYIDLPITFRPKDLGSAVWDMI 1089
             NDFDLGLNAL  E+WL  VSIGGA+LT+S+K++K+GISYID+PITFRPKD GSA+WDMI
Sbjct: 212  KNDFDLGLNALDYEVWLGDVSIGGAQLTKSAKLEKSGISYIDVPITFRPKDFGSALWDMI 271

Query: 1090 RGRGTGYSIKGDIDVDTPFGAMKLPISKEGGTTSIKKNK 1206
            RGRGTGY++KG+IDVDTPFGAMKLPI KEGGTT +KK K
Sbjct: 272  RGRGTGYTMKGNIDVDTPFGAMKLPIIKEGGTTRLKKKK 310


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