BLASTX nr result

ID: Coptis25_contig00001441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001441
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278217.1| PREDICTED: staphylococcal nuclease domain-co...   229   2e-58
ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-co...   223   1e-56
emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]   223   1e-56
gb|ACN40579.1| unknown [Picea sitchensis]                             212   3e-53
emb|CAL38976.1| TUDOR protein with multiple SNc domains [Picea a...   212   3e-53

>ref|XP_002278217.1| PREDICTED: staphylococcal nuclease domain-containing protein 1 [Vitis
            vinifera] gi|296082235|emb|CBI21240.3| unnamed protein
            product [Vitis vinifera]
          Length = 991

 Score =  229 bits (583), Expect = 2e-58
 Identities = 116/133 (87%), Positives = 123/133 (92%)
 Frame = +2

Query: 2    NSWNRAMIVNTPRGAVESPKDLFEVFYVDYGNQEDVTYSQLRPLDPSVSSAPGLAQLCSL 181
            NSWNRAMIVN  RGAV+SPKD FEVFY+DYGNQE V Y +LRPLDPSVSS PGLAQLCSL
Sbjct: 797  NSWNRAMIVNAQRGAVQSPKDEFEVFYIDYGNQEVVPYDRLRPLDPSVSSMPGLAQLCSL 856

Query: 182  AYIKVPSLEEDFGEEAAEYLSACTLNSSKELRVMIEERDLSGGKAKGQGTGTVLIVTLVD 361
            AYIKVPSLEEDFG+EAAEYLS  TLNSS+ELRVMIEERD SGGKAKGQGTGTVLIVTLVD
Sbjct: 857  AYIKVPSLEEDFGQEAAEYLSEHTLNSSRELRVMIEERDTSGGKAKGQGTGTVLIVTLVD 916

Query: 362  VEAGSSINAAMLE 400
            VEAG+SINAAML+
Sbjct: 917  VEAGTSINAAMLK 929


>ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-containing protein 1 [Vitis
            vinifera] gi|296088151|emb|CBI35621.3| unnamed protein
            product [Vitis vinifera]
          Length = 1000

 Score =  223 bits (569), Expect = 1e-56
 Identities = 111/133 (83%), Positives = 121/133 (90%)
 Frame = +2

Query: 2    NSWNRAMIVNTPRGAVESPKDLFEVFYVDYGNQEDVTYSQLRPLDPSVSSAPGLAQLCSL 181
            NSWNRAMIVN PRGAVESPKD FEVFY+DYGNQE + YSQLRPLDPSVSSAPGLAQLCSL
Sbjct: 799  NSWNRAMIVNAPRGAVESPKDKFEVFYIDYGNQEIIPYSQLRPLDPSVSSAPGLAQLCSL 858

Query: 182  AYIKVPSLEEDFGEEAAEYLSACTLNSSKELRVMIEERDLSGGKAKGQGTGTVLIVTLVD 361
            AYIKVPSL+EDFG+EAAE+ S  TLNSSKELR +IE++D SGGK KGQGTG VLIVTL+D
Sbjct: 859  AYIKVPSLDEDFGQEAAEHFSDMTLNSSKELRAVIEDKDTSGGKVKGQGTGIVLIVTLID 918

Query: 362  VEAGSSINAAMLE 400
            VEA SSINAAML+
Sbjct: 919  VEAESSINAAMLK 931


>emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]
          Length = 983

 Score =  223 bits (569), Expect = 1e-56
 Identities = 111/133 (83%), Positives = 121/133 (90%)
 Frame = +2

Query: 2    NSWNRAMIVNTPRGAVESPKDLFEVFYVDYGNQEDVTYSQLRPLDPSVSSAPGLAQLCSL 181
            NSWNRAMIVN PRGAVESPKD FEVFY+DYGNQE + YSQLRPLDPSVSSAPGLAQLCSL
Sbjct: 782  NSWNRAMIVNAPRGAVESPKDKFEVFYIDYGNQEIIPYSQLRPLDPSVSSAPGLAQLCSL 841

Query: 182  AYIKVPSLEEDFGEEAAEYLSACTLNSSKELRVMIEERDLSGGKAKGQGTGTVLIVTLVD 361
            AYIKVPSL+EDFG+EAAE+ S  TLNSSKELR +IE++D SGGK KGQGTG VLIVTL+D
Sbjct: 842  AYIKVPSLDEDFGQEAAEHFSDMTLNSSKELRAVIEDKDTSGGKVKGQGTGIVLIVTLID 901

Query: 362  VEAGSSINAAMLE 400
            VEA SSINAAML+
Sbjct: 902  VEAESSINAAMLK 914


>gb|ACN40579.1| unknown [Picea sitchensis]
          Length = 988

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/134 (78%), Positives = 117/134 (87%), Gaps = 1/134 (0%)
 Frame = +2

Query: 2    NSWNRAMIVNTPRG-AVESPKDLFEVFYVDYGNQEDVTYSQLRPLDPSVSSAPGLAQLCS 178
            +SWNRAM+VN PRG ++ SPKD FEVFY+DYGNQE V YS+LRPLDPSVSSAPGLAQLCS
Sbjct: 795  DSWNRAMVVNAPRGGSIASPKDEFEVFYIDYGNQETVIYSKLRPLDPSVSSAPGLAQLCS 854

Query: 179  LAYIKVPSLEEDFGEEAAEYLSACTLNSSKELRVMIEERDLSGGKAKGQGTGTVLIVTLV 358
            LAYIKVP LEEDFG+EAAEY S CTL SSKEL  M+E RD +GGK KGQGTGTVL+VTLV
Sbjct: 855  LAYIKVPGLEEDFGQEAAEYFSDCTLRSSKELMAMVEGRDTTGGKVKGQGTGTVLLVTLV 914

Query: 359  DVEAGSSINAAMLE 400
            DVEA +SINA ML+
Sbjct: 915  DVEAETSINATMLQ 928


>emb|CAL38976.1| TUDOR protein with multiple SNc domains [Picea abies]
          Length = 988

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/134 (78%), Positives = 117/134 (87%), Gaps = 1/134 (0%)
 Frame = +2

Query: 2    NSWNRAMIVNTPRG-AVESPKDLFEVFYVDYGNQEDVTYSQLRPLDPSVSSAPGLAQLCS 178
            +SWNRAM+VN PRG ++ SPKD FEVFY+DYGNQE V YS+LRPLDPSVSSAPGLAQLCS
Sbjct: 795  DSWNRAMVVNAPRGGSIASPKDEFEVFYIDYGNQETVIYSKLRPLDPSVSSAPGLAQLCS 854

Query: 179  LAYIKVPSLEEDFGEEAAEYLSACTLNSSKELRVMIEERDLSGGKAKGQGTGTVLIVTLV 358
            LAYIKVP LEEDFG+EAAEY S CTL SSKEL  M+E RD +GGK KGQGTGTVL+VTLV
Sbjct: 855  LAYIKVPGLEEDFGQEAAEYFSDCTLRSSKELMAMVEGRDTTGGKVKGQGTGTVLLVTLV 914

Query: 359  DVEAGSSINAAMLE 400
            DVEA +SINA ML+
Sbjct: 915  DVEAETSINATMLQ 928