BLASTX nr result

ID: Coptis25_contig00001440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001440
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36365.3| unnamed protein product [Vitis vinifera]              308   5e-82
ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   308   5e-82
ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|2...   300   1e-79
ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putativ...   291   5e-77
ref|XP_004152179.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   289   2e-76

>emb|CBI36365.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  308 bits (788), Expect = 5e-82
 Identities = 149/183 (81%), Positives = 171/183 (93%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRA++EHC+GKKI  A +++DSKVID   +SPSDF+ASL+GKTIV+AHRKGKN
Sbjct: 4   LPEVEAARRAVEEHCVGKKITKAVIANDSKVIDG--VSPSDFEASLLGKTIVSAHRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           +WLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS V DT+EWPSKYSKLF++LDDG+E S
Sbjct: 62  MWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL+DPASVPPISELGPDALLEPMTID  ++SLSKKK+AIK LLLDQ+YI
Sbjct: 122 FTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSYI 181

Query: 542 AGI 550
           AGI
Sbjct: 182 AGI 184


>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
           vinifera]
          Length = 403

 Score =  308 bits (788), Expect = 5e-82
 Identities = 149/183 (81%), Positives = 171/183 (93%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRA++EHC+GKKI  A +++DSKVID   +SPSDF+ASL+GKTIV+AHRKGKN
Sbjct: 4   LPEVEAARRAVEEHCVGKKITKAVIANDSKVIDG--VSPSDFEASLLGKTIVSAHRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           +WLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS V DT+EWPSKYSKLF++LDDG+E S
Sbjct: 62  MWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL+DPASVPPISELGPDALLEPMTID  ++SLSKKK+AIK LLLDQ+YI
Sbjct: 122 FTDKRRFAKVRLLEDPASVPPISELGPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSYI 181

Query: 542 AGI 550
           AGI
Sbjct: 182 AGI 184


>ref|XP_002327413.1| predicted protein [Populus trichocarpa] gi|222835967|gb|EEE74388.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  300 bits (767), Expect = 1e-79
 Identities = 148/183 (80%), Positives = 168/183 (91%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRAI+EHC+GKKIK A ++DDSKVID   +SPSDF A+L+GKTIV+A RKGKN
Sbjct: 4   LPEVEAARRAIEEHCIGKKIKKAIIADDSKVIDG--VSPSDFVAALVGKTIVSALRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           LWLQLDSPPFPSFQFGMAGA+YIKGVAVTKYKRS VND++EWPSKYSK F+QLDDG+E S
Sbjct: 62  LWLQLDSPPFPSFQFGMAGAVYIKGVAVTKYKRSAVNDSDEWPSKYSKFFVQLDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL+DPAS PPISELGPDALLEPMT+D L  SLSKKKVAIK LLLDQ+++
Sbjct: 122 FTDKRRFAKVRLLEDPASKPPISELGPDALLEPMTVDELHGSLSKKKVAIKALLLDQSFV 181

Query: 542 AGI 550
           +GI
Sbjct: 182 SGI 184


>ref|XP_002517673.1| formamidopyrimidine-DNA glycosylase, putative [Ricinus communis]
           gi|223543305|gb|EEF44837.1| formamidopyrimidine-DNA
           glycosylase, putative [Ricinus communis]
          Length = 403

 Score =  291 bits (745), Expect = 5e-77
 Identities = 140/183 (76%), Positives = 166/183 (90%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAAR+AI+E+CLGKKIK A ++ D+KVID   +SPSDF+A+L+GKT+++AHRKGKN
Sbjct: 4   LPEVEAARKAIEENCLGKKIKKAIIASDAKVIDG--VSPSDFEAALVGKTLISAHRKGKN 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRS VNDT+EWPSKYSKLF++LDDG+E S
Sbjct: 62  LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKLFVELDDGLELS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+VRLL +P SVPPISELGPDALL+PM +D   +SL KKK+ IK LLLDQ++I
Sbjct: 122 FTDKRRFAKVRLLNNPVSVPPISELGPDALLQPMAVDEFYKSLCKKKMPIKALLLDQSFI 181

Query: 542 AGI 550
           +GI
Sbjct: 182 SGI 184


>ref|XP_004152179.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Cucumis
           sativus] gi|449513447|ref|XP_004164328.1| PREDICTED:
           formamidopyrimidine-DNA glycosylase-like [Cucumis
           sativus]
          Length = 402

 Score =  289 bits (740), Expect = 2e-76
 Identities = 140/183 (76%), Positives = 165/183 (90%)
 Frame = +2

Query: 2   LPEVEAARRAIQEHCLGKKIKSAHVSDDSKVIDAGRISPSDFQASLIGKTIVAAHRKGKN 181
           LPEVEAARRAI+EHC+GK IK A ++DD+KVID   +SPSDF+ASL+GKTI++AHRKGK+
Sbjct: 4   LPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDG--VSPSDFEASLLGKTILSAHRKGKH 61

Query: 182 LWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSQVNDTEEWPSKYSKLFLQLDDGVEFS 361
           LWL LDSPPFP+F FGMAGAIYIKGVAVT YKRS VND +EWPSKYSK F++LDDGV+ S
Sbjct: 62  LWLCLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDLS 121

Query: 362 FTDKRRFARVRLLKDPASVPPISELGPDALLEPMTIDVLVQSLSKKKVAIKTLLLDQNYI 541
           FTDKRRFA+V LL+DPASVPPIS+LGPDALLEPM +D  ++SL KKK+AIKTLLLDQ+YI
Sbjct: 122 FTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLKKKKLAIKTLLLDQSYI 181

Query: 542 AGI 550
           +GI
Sbjct: 182 SGI 184


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