BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001435
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloro...   499   e-139
sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, ...   489   e-136
gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]         482   e-133
sp|Q9M4S8.1|TPIC_FRAAN RecName: Full=Triosephosphate isomerase, ...   479   e-132
ref|XP_002312980.1| predicted protein [Populus trichocarpa] gi|2...   478   e-132

>ref|XP_002274871.1| PREDICTED: triosephosphate isomerase, chloroplastic-like isoform 1
            [Vitis vinifera]
          Length = 324

 Score =  499 bits (1286), Expect = e-139
 Identities = 257/324 (79%), Positives = 283/324 (87%), Gaps = 4/324 (1%)
 Frame = +1

Query: 274  ALVSTSLASN---PKSTAAAVITPPSSSHFSGLRRSCLKFDQSESRNSFDSHLRISST-K 441
            A+ STSLAS    PK+T  +  +  S++ FSGLRRS    D S  +  F S+LRISS+ +
Sbjct: 3    AVTSTSLASQLSTPKATTPSY-SYSSATQFSGLRRSFSNLDHSP-QPFFSSNLRISSSPR 60

Query: 442  KSCRGVVAMAGSGTFFVGGNWKCNGTKDSINKLVSDLNNATLEXXXXXXXXXXFVYLDQV 621
            K CRG+VAMAGSG FFVGGNWKCNGTKDSI+KLVSDLN+A LE          FVYLDQV
Sbjct: 61   KPCRGIVAMAGSGKFFVGGNWKCNGTKDSISKLVSDLNSAKLEADVDVVVAPPFVYLDQV 120

Query: 622  KNTLTDRVEISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGK 801
            KN+LTDR+EISAQNSWVGKGGAFTGEISVEQLKDIGC WVILGHSERRHVIGEDDQFIGK
Sbjct: 121  KNSLTDRIEISAQNSWVGKGGAFTGEISVEQLKDIGCNWVILGHSERRHVIGEDDQFIGK 180

Query: 802  KAAYALSENLKVIACIGERLEEREAGKTFDVCFQQLKAFADSVPSWDDIVVAYEPVWAIG 981
            KAAYALS+ LKVIACIGE L+EREAGKTFDVCFQQ+KAFAD+VPSWDD+V+AYEPVWAIG
Sbjct: 181  KAAYALSQGLKVIACIGELLQEREAGKTFDVCFQQMKAFADAVPSWDDVVIAYEPVWAIG 240

Query: 982  TGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDGFLV 1161
            TGKVA+P QAQEVH+AVRDWLKKNVSAEVASKTRIIYGGSVNGSNC+ELAK+EDIDGFLV
Sbjct: 241  TGKVATPLQAQEVHIAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCSELAKQEDIDGFLV 300

Query: 1162 GGASLKGPEFATIINSVTSKKVAA 1233
            GGASLKGPEFA I+NSVTSKKVAA
Sbjct: 301  GGASLKGPEFAVIVNSVTSKKVAA 324


>sp|P48496.1|TPIC_SPIOL RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM;
            Short=Triose-phosphate isomerase; Flags: Precursor
            gi|806312|gb|AAA66289.1| triosephosphate isomerase,
            chloroplast isozyme [Spinacia oleracea]
          Length = 322

 Score =  489 bits (1259), Expect = e-136
 Identities = 251/327 (76%), Positives = 281/327 (85%), Gaps = 6/327 (1%)
 Frame = +1

Query: 271  MALVSTSLASNPKSTAAAVITPPSSSHFSGLRRSCLKFDQSESRNS-----FDSHLRISS 435
            MA+VSTSLAS   +  +AV     S+ FSGLRRS LK + S S  S      DSHLR+SS
Sbjct: 1    MAVVSTSLASQITNPNSAV-----STQFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSS 55

Query: 436  TKKSC-RGVVAMAGSGTFFVGGNWKCNGTKDSINKLVSDLNNATLEXXXXXXXXXXFVYL 612
            + + C RGVVAMAGSG FFVGGNWKCNGTK+SI KLVSDLN+ATLE          FVY+
Sbjct: 56   SSRRCPRGVVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYI 115

Query: 613  DQVKNTLTDRVEISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQF 792
            DQVK++LT RVEISAQN W+GKGGAFTGEISVEQLKD+GC+WVILGHSERRHVIGE ++F
Sbjct: 116  DQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEF 175

Query: 793  IGKKAAYALSENLKVIACIGERLEEREAGKTFDVCFQQLKAFADSVPSWDDIVVAYEPVW 972
            IGKKAAYAL++ + VIACIGE LEEREAGKTFDVC+QQLKAFAD++PSWD++VVAYEPVW
Sbjct: 176  IGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVW 235

Query: 973  AIGTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDG 1152
            AIGTGKVASP+QAQEVHVAVRDWLKKNVS EVASKTRIIYGGSVNG NCAELAK+EDIDG
Sbjct: 236  AIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDIDG 295

Query: 1153 FLVGGASLKGPEFATIINSVTSKKVAA 1233
            FLVGGASLKGPEFATI+NSVT+KKVAA
Sbjct: 296  FLVGGASLKGPEFATIVNSVTAKKVAA 322


>gb|ADG27841.1| triosephosphate isomerase [Gossypium hirsutum]
          Length = 307

 Score =  482 bits (1240), Expect = e-133
 Identities = 239/298 (80%), Positives = 262/298 (87%), Gaps = 3/298 (1%)
 Frame = +1

Query: 349  HFSGLRRSCLKFDQSESRN---SFDSHLRISSTKKSCRGVVAMAGSGTFFVGGNWKCNGT 519
            HF+GL RS  K D S+S++     +S LR++S++K CR V AMAGSG FFVGGNWKCNGT
Sbjct: 10   HFNGLHRSSPKLDSSQSQSFLQHINSQLRLASSRKPCRAVTAMAGSGKFFVGGNWKCNGT 69

Query: 520  KDSINKLVSDLNNATLEXXXXXXXXXXFVYLDQVKNTLTDRVEISAQNSWVGKGGAFTGE 699
            KDSI KLVSDLN+A LE          FVYLDQV  +LT R+E+SAQNSW+GKGGAFTGE
Sbjct: 70   KDSITKLVSDLNSAKLETDVDVVVSPPFVYLDQVTASLTSRIEVSAQNSWIGKGGAFTGE 129

Query: 700  ISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAYALSENLKVIACIGERLEEREAG 879
            ISVEQLKDIGCKWVILGHSERRH+IGEDDQFIGKKAAYAL+E L VIACIGE LEEREAG
Sbjct: 130  ISVEQLKDIGCKWVILGHSERRHIIGEDDQFIGKKAAYALNEGLGVIACIGELLEEREAG 189

Query: 880  KTFDVCFQQLKAFADSVPSWDDIVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKKNVS 1059
            KTFDVCF+QLKAFAD VPSWD+IV+AYEPVWAIGTGKVA+P+QAQEVHVAV DWLKKNVS
Sbjct: 190  KTFDVCFRQLKAFADVVPSWDNIVIAYEPVWAIGTGKVATPQQAQEVHVAVHDWLKKNVS 249

Query: 1060 AEVASKTRIIYGGSVNGSNCAELAKKEDIDGFLVGGASLKGPEFATIINSVTSKKVAA 1233
             EVASKTRIIYGGSVNGSNCAELAK+EDIDGFLVGGASLKGPEFATI+NSVTSKKVAA
Sbjct: 250  EEVASKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVAA 307


>sp|Q9M4S8.1|TPIC_FRAAN RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM;
            Short=Triose-phosphate isomerase; Flags: Precursor
            gi|7650502|gb|AAF66071.1|AF257322_1 triosephosphate
            isomerase [Fragaria x ananassa]
          Length = 314

 Score =  479 bits (1232), Expect = e-132
 Identities = 251/325 (77%), Positives = 276/325 (84%), Gaps = 4/325 (1%)
 Frame = +1

Query: 271  MALVSTSLASN---PKSTAAAVITPPSSSHFSGLRRSCLKFDQSESRNSFDSHLRISST- 438
            MA+ STSLAS    PKS          S  +SGLRRSC K DQS S  S   HL +SS+ 
Sbjct: 1    MAVASTSLASQLSGPKSL---------SQPYSGLRRSCPKLDQSHS--SLFQHLSLSSSS 49

Query: 439  KKSCRGVVAMAGSGTFFVGGNWKCNGTKDSINKLVSDLNNATLEXXXXXXXXXXFVYLDQ 618
            +K+ R VVAMAG+G FFVGGNWKCNGTKD I+KLVSDLN+A LE          F+YLDQ
Sbjct: 50   RKASRAVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQ 109

Query: 619  VKNTLTDRVEISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIG 798
            VK++LTDR+EIS QNSWV KGGAFTGEISVEQLKDIG KWVILGHSERRHVIGEDDQFIG
Sbjct: 110  VKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIG 169

Query: 799  KKAAYALSENLKVIACIGERLEEREAGKTFDVCFQQLKAFADSVPSWDDIVVAYEPVWAI 978
            KKAAYAL+E L VIACIGE+LEEREAGKTFDVC++QLKAFAD+VPSW++IVVAYEPVWAI
Sbjct: 170  KKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAI 229

Query: 979  GTGKVASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDGFL 1158
            GTGKVASP+QAQEVHVAVR+WLKKNVSAEVASKTRIIYGGSVNG N AELAK+EDIDGFL
Sbjct: 230  GTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKEEDIDGFL 289

Query: 1159 VGGASLKGPEFATIINSVTSKKVAA 1233
            VGGASLKGPEFATI+N+VTSKKVAA
Sbjct: 290  VGGASLKGPEFATIVNAVTSKKVAA 314


>ref|XP_002312980.1| predicted protein [Populus trichocarpa] gi|222849388|gb|EEE86935.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  478 bits (1229), Expect = e-132
 Identities = 243/321 (75%), Positives = 270/321 (84%)
 Frame = +1

Query: 271  MALVSTSLASNPKSTAAAVITPPSSSHFSGLRRSCLKFDQSESRNSFDSHLRISSTKKSC 450
            MA++STSL S PKS      T   +  FSGLRR C   + + S +   S LR  S +K  
Sbjct: 1    MAMLSTSL-SGPKSA-----TSYCAPEFSGLRRLCPNSNNNNSNSHSQSFLRFCSPRKPL 54

Query: 451  RGVVAMAGSGTFFVGGNWKCNGTKDSINKLVSDLNNATLEXXXXXXXXXXFVYLDQVKNT 630
            + VVAMAG+GTFFVGGNWKCNGTK+SI KLVSDLN+  LE          FVY+DQVK++
Sbjct: 55   KSVVAMAGTGTFFVGGNWKCNGTKESITKLVSDLNSTKLESDVDVVVAPPFVYIDQVKSS 114

Query: 631  LTDRVEISAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAA 810
            LTDR+EI+AQNSWV KGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGED+QFIGKKAA
Sbjct: 115  LTDRIEIAAQNSWVSKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDNQFIGKKAA 174

Query: 811  YALSENLKVIACIGERLEEREAGKTFDVCFQQLKAFADSVPSWDDIVVAYEPVWAIGTGK 990
            YALS+ L+VIACIGE LEEREAGKTFDVC+QQLKAFAD+VPSWD+IV+AYEPVWAIGTG 
Sbjct: 175  YALSQGLEVIACIGELLEEREAGKTFDVCYQQLKAFADAVPSWDNIVIAYEPVWAIGTGV 234

Query: 991  VASPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDGFLVGGA 1170
            VA+P QAQEVHVA+RDWLK NVSAEVASKTRIIYGGSVNG NCAELAK+EDIDGFLVGGA
Sbjct: 235  VATPVQAQEVHVAIRDWLKNNVSAEVASKTRIIYGGSVNGGNCAELAKQEDIDGFLVGGA 294

Query: 1171 SLKGPEFATIINSVTSKKVAA 1233
            SLKGPEFATI+NSVT KKVAA
Sbjct: 295  SLKGPEFATIVNSVTFKKVAA 315