BLASTX nr result

ID: Coptis25_contig00001432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001432
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]    86   3e-15
ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate...    80   2e-13
ref|XP_004158043.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...    77   1e-12
ref|XP_004153514.1| PREDICTED: abnormal spindle-like microcephal...    77   1e-12
ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephal...    77   1e-12

>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/93 (45%), Positives = 62/93 (66%)
 Frame = +3

Query: 27   IIRKCIAAIKIQSHWRAWLTRRNFLRQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIII 206
            +++K  AAIK+QS +R W  RR+F+++++A + +QS  R  KC  N Q  +  TKSAII+
Sbjct: 957  LVKKQQAAIKLQSAFRGWSLRRSFVKKQQAAIKIQSDFRGLKCQRNFQIYKIATKSAIIM 1016

Query: 207  QSRFRGLLCRREANRRRGPIILIQSYWRGWLRR 305
            QS  RG + R+   R R  I++IQS+ RGWL R
Sbjct: 1017 QSHLRGWIARKAVCRLRHQIVVIQSHCRGWLTR 1049



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/62 (41%), Positives = 42/62 (67%)
 Frame = +3

Query: 120  LVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFRGLLCRREANRRRGPIILIQSYWRGWL 299
            +++ S ++  + W  +   ++ TKSAIIIQS  RG + R+EA R R  +++IQSYW+G+L
Sbjct: 1128 MLLSSVLKLQRWWRGVLLLKSRTKSAIIIQSYIRGWIARQEATRERHRVVVIQSYWKGYL 1187

Query: 300  RR 305
             R
Sbjct: 1188 AR 1189



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
 Frame = +3

Query: 15   WRNFII-----RKCIAAIKIQSHWRAWLTRRNFLRQKKAVLVVQSAIRSFKCWTNLQQCR 179
            WRNF +      +  AA +IQ  +R WL RR+F+++K+AV+ +QS    F+ W   +   
Sbjct: 880  WRNFSVCNSHRNEYTAATQIQCCFRGWLLRRSFVQKKQAVINIQS---HFRGWLLRKSFV 936

Query: 180  TETKSAIIIQSRFRGLLCRREANRRRGPIILIQSYWRGW-LRR 305
             + ++   IQ  FRG L R    +++  I L QS +RGW LRR
Sbjct: 937  KKKQTVRKIQGAFRGWLLRNLVKKQQAAIKL-QSAFRGWSLRR 978


>ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein
            [Medicago truncatula] gi|355511469|gb|AES92611.1|
            Abnormal spindle-like microcephaly-associated
            protein-like protein [Medicago truncatula]
          Length = 1503

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
 Frame = +3

Query: 15   WRNFIIRKC-----IAAIKIQSHWRAWLTRRNFLRQKKAVLVVQSAIRSFKCWTNLQQCR 179
            W+N+I  K      + A KIQ ++R WL R+ F+ Q +AV+ +QS  R ++C   +Q  +
Sbjct: 942  WKNYIRCKSTRKEHLFATKIQCNFRRWLLRKRFINQIQAVIKIQSYFRMWRCVIAIQNFK 1001

Query: 180  TETKSAIIIQSRFRGLLCRREANRRRGPIILIQSYWRGWL 299
            T +K+AI+IQS FRG + R+ A  R+  I+ IQ + RGWL
Sbjct: 1002 TMSKAAIVIQSFFRGWIARKNACARKNQIVEIQRHCRGWL 1041


>ref|XP_004158043.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
            microcephaly-associated protein homolog [Cucumis sativus]
          Length = 1291

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = +3

Query: 42   IAAIKIQSHWRAWLTRRNFLRQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFR 221
            +AAI+IQS++R    RR FL  + A +V+Q  IR  +C       +    SAI+IQS  R
Sbjct: 855  LAAIQIQSYFRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSAIVIQSLVR 914

Query: 222  GLLCRREANRRRGPIILIQSYWRGWL 299
            G + RRE +R+R  I+L+QS+WR WL
Sbjct: 915  GWIARREGHRQRRLIVLVQSFWRRWL 940


>ref|XP_004153514.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
           homolog, partial [Cucumis sativus]
          Length = 731

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = +3

Query: 42  IAAIKIQSHWRAWLTRRNFLRQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFR 221
           +AAI+IQS++R    RR FL  + A +V+Q  IR  +C       +    SAI+IQS  R
Sbjct: 295 LAAIQIQSYFRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSAIVIQSLVR 354

Query: 222 GLLCRREANRRRGPIILIQSYWRGWL 299
           G + RRE +R+R  I+L+QS+WR WL
Sbjct: 355 GWIARREGHRQRRLIVLVQSFWRRWL 380


>ref|XP_004145177.1| PREDICTED: abnormal spindle-like microcephaly-associated protein
            homolog [Cucumis sativus]
          Length = 1368

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = +3

Query: 42   IAAIKIQSHWRAWLTRRNFLRQKKAVLVVQSAIRSFKCWTNLQQCRTETKSAIIIQSRFR 221
            +AAI+IQS++R    RR FL  + A +V+Q  IR  +C       +    SAI+IQS  R
Sbjct: 932  LAAIQIQSYFRGKFLRRKFLSLRMATIVIQKNIRMLRCQKEYTHNKNVVTSAIVIQSLVR 991

Query: 222  GLLCRREANRRRGPIILIQSYWRGWL 299
            G + RRE +R+R  I+L+QS+WR WL
Sbjct: 992  GWIARREGHRQRRLIVLVQSFWRRWL 1017


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