BLASTX nr result
ID: Coptis25_contig00001431
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00001431 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI33287.3| unnamed protein product [Vitis vinifera] 113 1e-23 emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera] 113 2e-23 ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus c... 100 1e-19 ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate... 100 2e-19 ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi... 99 5e-19 >emb|CBI33287.3| unnamed protein product [Vitis vinifera] Length = 627 Score = 113 bits (283), Expect = 1e-23 Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 3/120 (2%) Frame = -3 Query: 352 SHWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG 173 +H RGWL RR+ L QR A I IQ+ QC++C FQ YR A I IQ+F RG + +NRLLG Sbjct: 269 NHCRGWLTRRDLLLQRKAVIKIQNAFQCVKCWKAFQCYRYAAIDIQRFVRGHITRNRLLG 328 Query: 172 ASSYRSIC---STDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSHI 2 SS RS T S+ SF+LK+ + KLQRWW+ V+ T+SAII+QSHI Sbjct: 329 TSSLRSASPNGCTLQASRGCFPSFQLKMLLTSVLKLQRWWRGVLFLNSRTKSAIIIQSHI 388 >emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera] Length = 1251 Score = 113 bits (282), Expect = 2e-23 Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 3/120 (2%) Frame = -3 Query: 352 SHWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG 173 SH RGWL RR+ L R A I IQ+ QC++C FQ YR A I IQ+F RG + +NRLLG Sbjct: 1041 SHCRGWLTRRDLLLXRKAVIKIQNAFQCVKCWKAFQCYRYAAIDIQRFVRGXITRNRLLG 1100 Query: 172 ASSYRSIC---STDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSHI 2 S RS T S+ SF+LK+ + KLQRWW+ V+L K T+SAII+QS+I Sbjct: 1101 TSGLRSASPNGCTSQASRGCFPSFQLKMLLSSVLKLQRWWRGVLLLKSRTKSAIIIQSYI 1160 >ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus communis] gi|223542347|gb|EEF43889.1| hypothetical protein RCOM_0905210 [Ricinus communis] Length = 1282 Score = 100 bits (249), Expect = 1e-19 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 3/116 (2%) Frame = -3 Query: 343 RGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLGASS 164 RGWLIRRNF+ Q +A IQ+ ++ L C F + A I+IQ+F RGQ+A+ RLLGAS Sbjct: 928 RGWLIRRNFMHQIEAVKKIQNVIRGLNCQKAFNCRKNAAIEIQRFVRGQIARKRLLGASH 987 Query: 163 YRSICSTDLISKDSLMSF---ELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSH 5 + +IC+T + F ELK+ + KLQRWW+ V+L KL TRSAI++QS+ Sbjct: 988 F-NICTTVYCKFQTSGCFPRPELKVILSAILKLQRWWRCVLLHKLRTRSAIVIQSY 1042 >ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein [Medicago truncatula] gi|355511469|gb|AES92611.1| Abnormal spindle-like microcephaly-associated protein-like protein [Medicago truncatula] Length = 1503 Score = 100 bits (248), Expect = 2e-19 Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 2/116 (1%) Frame = -3 Query: 349 HWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG- 173 H RGWL++RNFL QRDA + IQS + L+C + A ++IQ+F RG + +NRLLG Sbjct: 1036 HCRGWLVKRNFLFQRDAIVKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGHLTRNRLLGS 1095 Query: 172 ASSYRSICSTDLISKDS-LMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQS 8 A S + IS+ + L SF+L+ F++ KLQRWW+ ++L KL TRSAII+QS Sbjct: 1096 ALRLLSADTGSCISRPAGLCSFQLEAFMFAVVKLQRWWRGLLLLKLMTRSAIIIQS 1151 Score = 79.3 bits (194), Expect = 3e-13 Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%) Frame = -3 Query: 343 RGWLIRRNFLRQRDAAISIQS-GLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG-A 170 RGW+ RR A + Q+ + +R C E+ A +++Q++ RG + +N +LG A Sbjct: 1154 RGWIARRK------AIVETQNINVMEVRNCQEY-----AALELQRYIRGHLTRNLILGSA 1202 Query: 169 SSYRSICSTDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSHI 2 S R++ + + + SF+L++F++ KLQRWWK ++L KL T+SAII+QSHI Sbjct: 1203 SKLRAVAAGCISKRTGFCSFQLELFLFQVVKLQRWWKHLLLHKLMTKSAIIIQSHI 1258 >ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein homolog [Glycine max] Length = 1350 Score = 98.6 bits (244), Expect = 5e-19 Identities = 49/116 (42%), Positives = 77/116 (66%), Gaps = 2/116 (1%) Frame = -3 Query: 349 HWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLGA 170 H RGWL++R+FL QRDAA+ IQ ++ L+C + A ++IQ F RG + +N+LLG+ Sbjct: 894 HCRGWLVKRDFLFQRDAAVKIQCAIRSLKCQKALNCLKDAALEIQCFIRGHLTRNQLLGS 953 Query: 169 S--SYRSICSTDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQS 8 + SY +I + + F+L++F++ KLQRWWK ++L KL+ +SAII+QS Sbjct: 954 ASKSYTAIPISCISRPFGFCCFQLELFLFSVVKLQRWWKGLLLLKLKNKSAIIIQS 1009 Score = 60.1 bits (144), Expect = 2e-07 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 8/121 (6%) Frame = -3 Query: 346 WRGWLIRRNFLRQRDAAISIQS---GLQCLRCCWEFQSYRL---ATIQIQQFARGQVAQN 185 W+G L+ + + +AI IQS G R F+ + + A + IQ + RG + QN Sbjct: 991 WKGLLLLK---LKNKSAIIIQSCTRGWIARRKATVFRQHVIQEDAALVIQCYIRGHLTQN 1047 Query: 184 RLLGASSYRS-ICSTDLISKD-SLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQ 11 LG +S S + IS+ SF+L++F+ KLQRWWK ++L+KL T+SAI++Q Sbjct: 1048 WNLGGTSNLSEVIPAGYISRPFGCRSFQLELFLLSVVKLQRWWKGLLLQKLMTKSAIVIQ 1107 Query: 10 S 8 S Sbjct: 1108 S 1108