BLASTX nr result

ID: Coptis25_contig00001431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001431
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33287.3| unnamed protein product [Vitis vinifera]              113   1e-23
emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]   113   2e-23
ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus c...   100   1e-19
ref|XP_003610414.1| Abnormal spindle-like microcephaly-associate...   100   2e-19
ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...    99   5e-19

>emb|CBI33287.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 3/120 (2%)
 Frame = -3

Query: 352 SHWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG 173
           +H RGWL RR+ L QR A I IQ+  QC++C   FQ YR A I IQ+F RG + +NRLLG
Sbjct: 269 NHCRGWLTRRDLLLQRKAVIKIQNAFQCVKCWKAFQCYRYAAIDIQRFVRGHITRNRLLG 328

Query: 172 ASSYRSIC---STDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSHI 2
            SS RS      T   S+    SF+LK+ +    KLQRWW+ V+     T+SAII+QSHI
Sbjct: 329 TSSLRSASPNGCTLQASRGCFPSFQLKMLLTSVLKLQRWWRGVLFLNSRTKSAIIIQSHI 388


>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 3/120 (2%)
 Frame = -3

Query: 352  SHWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG 173
            SH RGWL RR+ L  R A I IQ+  QC++C   FQ YR A I IQ+F RG + +NRLLG
Sbjct: 1041 SHCRGWLTRRDLLLXRKAVIKIQNAFQCVKCWKAFQCYRYAAIDIQRFVRGXITRNRLLG 1100

Query: 172  ASSYRSIC---STDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSHI 2
             S  RS      T   S+    SF+LK+ +    KLQRWW+ V+L K  T+SAII+QS+I
Sbjct: 1101 TSGLRSASPNGCTSQASRGCFPSFQLKMLLSSVLKLQRWWRGVLLLKSRTKSAIIIQSYI 1160


>ref|XP_002518502.1| hypothetical protein RCOM_0905210 [Ricinus communis]
            gi|223542347|gb|EEF43889.1| hypothetical protein
            RCOM_0905210 [Ricinus communis]
          Length = 1282

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
 Frame = -3

Query: 343  RGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLGASS 164
            RGWLIRRNF+ Q +A   IQ+ ++ L C   F   + A I+IQ+F RGQ+A+ RLLGAS 
Sbjct: 928  RGWLIRRNFMHQIEAVKKIQNVIRGLNCQKAFNCRKNAAIEIQRFVRGQIARKRLLGASH 987

Query: 163  YRSICSTDLISKDSLMSF---ELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSH 5
            + +IC+T      +   F   ELK+ +    KLQRWW+ V+L KL TRSAI++QS+
Sbjct: 988  F-NICTTVYCKFQTSGCFPRPELKVILSAILKLQRWWRCVLLHKLRTRSAIVIQSY 1042


>ref|XP_003610414.1| Abnormal spindle-like microcephaly-associated protein-like protein
            [Medicago truncatula] gi|355511469|gb|AES92611.1|
            Abnormal spindle-like microcephaly-associated
            protein-like protein [Medicago truncatula]
          Length = 1503

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/116 (47%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
 Frame = -3

Query: 349  HWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG- 173
            H RGWL++RNFL QRDA + IQS  + L+C       + A ++IQ+F RG + +NRLLG 
Sbjct: 1036 HCRGWLVKRNFLFQRDAIVKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGHLTRNRLLGS 1095

Query: 172  ASSYRSICSTDLISKDS-LMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQS 8
            A    S  +   IS+ + L SF+L+ F++   KLQRWW+ ++L KL TRSAII+QS
Sbjct: 1096 ALRLLSADTGSCISRPAGLCSFQLEAFMFAVVKLQRWWRGLLLLKLMTRSAIIIQS 1151



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = -3

Query: 343  RGWLIRRNFLRQRDAAISIQS-GLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLG-A 170
            RGW+ RR       A +  Q+  +  +R C E+     A +++Q++ RG + +N +LG A
Sbjct: 1154 RGWIARRK------AIVETQNINVMEVRNCQEY-----AALELQRYIRGHLTRNLILGSA 1202

Query: 169  SSYRSICSTDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQSHI 2
            S  R++ +  +  +    SF+L++F++   KLQRWWK ++L KL T+SAII+QSHI
Sbjct: 1203 SKLRAVAAGCISKRTGFCSFQLELFLFQVVKLQRWWKHLLLHKLMTKSAIIIQSHI 1258


>ref|XP_003550499.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
            microcephaly-associated protein homolog [Glycine max]
          Length = 1350

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/116 (42%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
 Frame = -3

Query: 349  HWRGWLIRRNFLRQRDAAISIQSGLQCLRCCWEFQSYRLATIQIQQFARGQVAQNRLLGA 170
            H RGWL++R+FL QRDAA+ IQ  ++ L+C       + A ++IQ F RG + +N+LLG+
Sbjct: 894  HCRGWLVKRDFLFQRDAAVKIQCAIRSLKCQKALNCLKDAALEIQCFIRGHLTRNQLLGS 953

Query: 169  S--SYRSICSTDLISKDSLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQS 8
            +  SY +I  + +        F+L++F++   KLQRWWK ++L KL+ +SAII+QS
Sbjct: 954  ASKSYTAIPISCISRPFGFCCFQLELFLFSVVKLQRWWKGLLLLKLKNKSAIIIQS 1009



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
 Frame = -3

Query: 346  WRGWLIRRNFLRQRDAAISIQS---GLQCLRCCWEFQSYRL---ATIQIQQFARGQVAQN 185
            W+G L+ +    +  +AI IQS   G    R    F+ + +   A + IQ + RG + QN
Sbjct: 991  WKGLLLLK---LKNKSAIIIQSCTRGWIARRKATVFRQHVIQEDAALVIQCYIRGHLTQN 1047

Query: 184  RLLGASSYRS-ICSTDLISKD-SLMSFELKIFVYYTKKLQRWWKRVMLRKLETRSAIIVQ 11
              LG +S  S +     IS+     SF+L++F+    KLQRWWK ++L+KL T+SAI++Q
Sbjct: 1048 WNLGGTSNLSEVIPAGYISRPFGCRSFQLELFLLSVVKLQRWWKGLLLQKLMTKSAIVIQ 1107

Query: 10   S 8
            S
Sbjct: 1108 S 1108


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