BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001421
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156544.1| PREDICTED: exopolygalacturonase-like [Cucumi...   100   1e-18
ref|XP_002890206.1| glycoside hydrolase family 28 protein [Arabi...    99   2e-18
ref|XP_003532865.1| PREDICTED: polygalacturonase-like [Glycine max]    98   3e-18
gb|AAF71796.1|AC013430_5 F3F9.9 [Arabidopsis thaliana]                 96   1e-17
ref|NP_177961.2| Pectin lyase-like protein [Arabidopsis thaliana...    96   1e-17

>ref|XP_004156544.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
          Length = 403

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 49/107 (45%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
 Frame = -2

Query: 979 KVSDVRKYGAVGHGKIDCSKAFVKAWEEACAWEGDAIVYIRRETYYAGVTIFIGGQKCKY 800
           K  +V KYGA+  GK D SKAF+KAW +AC W+G   VY+ + T+  G  +F+G   C+ 
Sbjct: 34  KFFNVVKYGAIPDGKTDNSKAFLKAWNDACEWKGRGRVYVPKGTFKLGEVLFLG--PCEG 91

Query: 799 QAVKFQVEGIVKAPTNL--ITGDGWIKFQYIERMTIDGGGTFDGQGA 665
               F V+GI+KA T++  + GD WI F+Y++ +T+ GGG+ DGQGA
Sbjct: 92  HTA-FVVKGILKASTDMSSLYGDSWINFRYVDSLTVGGGGSLDGQGA 137


>ref|XP_002890206.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
            lyrata] gi|297336048|gb|EFH66465.1| glycoside hydrolase
            family 28 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 401

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
 Frame = -2

Query: 1027 CLAFHFALAVRARPYT--KVSDVRKYGAVGHGKIDCSKAFVKAWEEACAWEGDAIVYIRR 854
            CL   F     +RP T  KV DVR+YGA G GK D + AF  AW++AC W G + +YI +
Sbjct: 12   CLPLLFNAVTTSRPITGPKVFDVRRYGAKGDGKTDNTNAFTNAWKDACTWNGPSKMYIPK 71

Query: 853  ETYYAGVTIFIGGQKCKYQAVKFQVEGIVKAPTNL--ITGDGWIKFQYIERMTIDGGGTF 680
              +Y G   F G    K   + F ++G + AP N   I  + WI F+YI+ +T+ GGGT 
Sbjct: 72   GRFYLGGVTFGGPCNGK---ISFVIDGTLLAPPNNDDIKKETWINFRYIDYLTVSGGGTV 128

Query: 679  DGQGAQN 659
            DGQG ++
Sbjct: 129  DGQGKRS 135


>ref|XP_003532865.1| PREDICTED: polygalacturonase-like [Glycine max]
          Length = 396

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 49/112 (43%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
 Frame = -2

Query: 994 ARPYTKVSDVRKYGAVGHGKIDCSKAFVKAWEEACAWEGDAIVYIRRETYYAGVTIFIGG 815
           A  + K+ +V +YGA+  GK D S AF+KAW +AC W G A V I + TY     IF G 
Sbjct: 9   ADAHIKLFNVAEYGAIADGKEDNSVAFLKAWSDACKWNGSATVLIPKGTYMLKSVIFKG- 67

Query: 814 QKCKYQAVKFQVEGIVKAP--TNLITGDGWIKFQYIERMTIDGGGTFDGQGA 665
             C   ++ FQ++G++KAP   +L+T   WI F+YI+++ ++GGGT DGQG+
Sbjct: 68  -PCN-DSITFQIKGVLKAPIDPSLLTDQKWINFRYIDQLNVNGGGTLDGQGS 117


>gb|AAF71796.1|AC013430_5 F3F9.9 [Arabidopsis thaliana]
          Length = 412

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
 Frame = -2

Query: 1054 SSLTLLLWVCLAFHFALAVRARPYT-----KVSDVRKYGAVGHGKIDCSKAFVKAWEEAC 890
            S  +L+L++      A ++ A P       KV DVR YGA G GK D + AF KAW++AC
Sbjct: 6    SGFSLILFIAAV---ASSISAAPSAALVGRKVFDVRSYGARGDGKTDNTMAFTKAWKDAC 62

Query: 889  AWEGDAIVYIRRETYYAGVTIFIGGQKCKYQAVKFQVEGIVKAP--TNLITGDGWIKFQY 716
             W+G   VYI   T+Y G   F G   CK   + F ++G + AP   N I  D WI F+Y
Sbjct: 63   QWKGLPRVYIPFGTFYLGAVAFTG--PCK-SRISFIIKGTLLAPKDPNAIKQDSWIIFRY 119

Query: 715  IERMTIDGGGTFDGQGA 665
            ++ +T+ GGG  DGQG+
Sbjct: 120  VDYLTVSGGGILDGQGS 136


>ref|NP_177961.2| Pectin lyase-like protein [Arabidopsis thaliana]
            gi|332197980|gb|AEE36101.1| Pectin lyase-like protein
            [Arabidopsis thaliana]
          Length = 404

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
 Frame = -2

Query: 1054 SSLTLLLWVCLAFHFALAVRARPYT-----KVSDVRKYGAVGHGKIDCSKAFVKAWEEAC 890
            S  +L+L++      A ++ A P       KV DVR YGA G GK D + AF KAW++AC
Sbjct: 6    SGFSLILFIAAV---ASSISAAPSAALVGRKVFDVRSYGARGDGKTDNTMAFTKAWKDAC 62

Query: 889  AWEGDAIVYIRRETYYAGVTIFIGGQKCKYQAVKFQVEGIVKAP--TNLITGDGWIKFQY 716
             W+G   VYI   T+Y G   F G   CK   + F ++G + AP   N I  D WI F+Y
Sbjct: 63   QWKGLPRVYIPFGTFYLGAVAFTG--PCK-SRISFIIKGTLLAPKDPNAIKQDSWIIFRY 119

Query: 715  IERMTIDGGGTFDGQGA 665
            ++ +T+ GGG  DGQG+
Sbjct: 120  VDYLTVSGGGILDGQGS 136