BLASTX nr result

ID: Coptis25_contig00001415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001415
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136693.1| PREDICTED: uncharacterized protein At5g39570...    75   2e-24
ref|XP_004159652.1| PREDICTED: uncharacterized protein At5g39570...    75   2e-24
ref|XP_002332006.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-21
ref|XP_002332567.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-21
ref|XP_003543859.1| PREDICTED: uncharacterized protein At5g39570...    65   3e-21

>ref|XP_004136693.1| PREDICTED: uncharacterized protein At5g39570-like [Cucumis sativus]
          Length = 323

 Score = 75.5 bits (184), Expect(2) = 2e-24
 Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 7/63 (11%)
 Frame = -3

Query: 180 YERPHFQSNAEPSAYGDEALQTEYSSYSRP-----NKPSG--GGGRPKPQVNYGFQPQAA 22
           YERP F+S AEPSAYGD+ALQ EYSSYSRP       PSG  G G  +PQ  YGFQP  +
Sbjct: 56  YERPQFESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSSRPQPAYGFQPSGS 115

Query: 21  SYG 13
            YG
Sbjct: 116 EYG 118



 Score = 61.6 bits (148), Expect(2) = 2e-24
 Identities = 27/43 (62%), Positives = 30/43 (69%)
 Frame = -1

Query: 410 YYSRXXXXXXXXXXXDPTPYGGGYDIALTYGRPVEPSEETCYP 282
           YYSR           DPTPYGGG+D+ LTYGRP+ PSEETCYP
Sbjct: 3   YYSRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYP 45


>ref|XP_004159652.1| PREDICTED: uncharacterized protein At5g39570-like, partial [Cucumis
           sativus]
          Length = 172

 Score = 75.5 bits (184), Expect(2) = 2e-24
 Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 7/63 (11%)
 Frame = -3

Query: 180 YERPHFQSNAEPSAYGDEALQTEYSSYSRP-----NKPSG--GGGRPKPQVNYGFQPQAA 22
           YERP F+S AEPSAYGD+ALQ EYSSYSRP       PSG  G G  +PQ  YGFQP  +
Sbjct: 56  YERPQFESYAEPSAYGDDALQAEYSSYSRPKPHSYGAPSGEQGYGSSRPQPAYGFQPSGS 115

Query: 21  SYG 13
            YG
Sbjct: 116 EYG 118



 Score = 61.6 bits (148), Expect(2) = 2e-24
 Identities = 27/43 (62%), Positives = 30/43 (69%)
 Frame = -1

Query: 410 YYSRXXXXXXXXXXXDPTPYGGGYDIALTYGRPVEPSEETCYP 282
           YYSR           DPTPYGGG+D+ LTYGRP+ PSEETCYP
Sbjct: 3   YYSRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPLSPSEETCYP 45


>ref|XP_002332006.1| predicted protein [Populus trichocarpa] gi|222832515|gb|EEE70992.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 65.5 bits (158), Expect(2) = 1e-21
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = -3

Query: 180 YERPHFQSNAEPSAYGDEALQTEYSSYSRPNKPSGGGGRPKPQVNYGFQP 31
           Y+RP++ S +EPSAY DEAL+TEYSSY+RP KP  G    +PQ  YGFQP
Sbjct: 56  YDRPNYSSYSEPSAYADEALETEYSSYARP-KPRPGSTYGEPQPAYGFQP 104



 Score = 62.8 bits (151), Expect(2) = 1e-21
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -1

Query: 362 PTPYGGGYDIALTYGRPVEPSEETCYPI 279
           PTPYGGGYDIALTYGRP+ PS+ETCYPI
Sbjct: 20  PTPYGGGYDIALTYGRPIPPSDETCYPI 47


>ref|XP_002332567.1| predicted protein [Populus trichocarpa] gi|222832729|gb|EEE71206.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 65.5 bits (158), Expect(2) = 1e-21
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = -3

Query: 180 YERPHFQSNAEPSAYGDEALQTEYSSYSRPNKPSGGGGRPKPQVNYGFQP 31
           Y+RP++ S +EPSAY DEAL+TEYSSY+RP KP  G    +PQ  YGFQP
Sbjct: 54  YDRPNYSSYSEPSAYADEALETEYSSYARP-KPRPGSTYGEPQPAYGFQP 102



 Score = 62.8 bits (151), Expect(2) = 1e-21
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -1

Query: 362 PTPYGGGYDIALTYGRPVEPSEETCYPI 279
           PTPYGGGYDIALTYGRP+ PS+ETCYPI
Sbjct: 20  PTPYGGGYDIALTYGRPIPPSDETCYPI 47


>ref|XP_003543859.1| PREDICTED: uncharacterized protein At5g39570-like [Glycine max]
          Length = 374

 Score = 64.7 bits (156), Expect(2) = 3e-21
 Identities = 38/58 (65%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -3

Query: 180 YERPHFQSNAEPSAYGDEALQTEYSSYSRPNKPSGGGGRPKPQVNYGFQPQAAS-YGG 10
           Y+RP + SNAEPSAYGDEAL TEYSSYSRP KP     RP P    GF P A S YGG
Sbjct: 60  YDRPQYTSNAEPSAYGDEALATEYSSYSRP-KP-----RPAPA---GFNPAAGSGYGG 108



 Score = 62.0 bits (149), Expect(2) = 3e-21
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -1

Query: 362 PTPYGGGYDIALTYGRPVEPSEETCYPI 279
           PTPYGGGYDIALTYGRP+ PS+ETCYP+
Sbjct: 22  PTPYGGGYDIALTYGRPIPPSDETCYPL 49


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