BLASTX nr result

ID: Coptis25_contig00001408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001408
         (1889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29088.3| unnamed protein product [Vitis vinifera]              441   e-121
ref|XP_002526926.1| conserved hypothetical protein [Ricinus comm...   424   e-116
ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|XP_003555152.1| PREDICTED: uncharacterized protein LOC100810...   387   e-105
tpg|DAA60843.1| TPA: hypothetical protein ZEAMMB73_930037 [Zea m...   370   e-100

>emb|CBI29088.3| unnamed protein product [Vitis vinifera]
          Length = 1124

 Score =  441 bits (1133), Expect(2) = e-121
 Identities = 225/436 (51%), Positives = 275/436 (63%), Gaps = 4/436 (0%)
 Frame = +1

Query: 1    CFPPVAIAWDSTSGLHVIPNLYSETISVDSSPAFWDSTQESDMTTVLLLLDPHCSFTIGA 180
            CFPPVA+AWD+TSGLHV+PNLY ETI VDSSPA W S Q S+ TT+LLL+DPHCS+    
Sbjct: 661  CFPPVALAWDTTSGLHVVPNLYGETIVVDSSPALWSSAQGSEKTTLLLLVDPHCSYKASV 720

Query: 181  GVSVTTAAGRFLLLYCSEIVGFSIAIIFFALMRQARAWELDLPLPSLLAAVEXXXXXXXX 360
             VS + AA RFLLLYCS+IVGF IA+IFFALMRQA AWELDLP+PS++ AVE        
Sbjct: 721  AVSSSAAASRFLLLYCSQIVGFCIAVIFFALMRQAHAWELDLPIPSMITAVESNLRMPLP 780

Query: 361  XXXXXXXXXXXXXXXXXXXXXXFPPLSSFFIVSIICYAFANGXXXXXXXXXXXXXYFTAN 540
                                  FPP++SF  VSIICY FANG             Y  A 
Sbjct: 781  FLLLAAVPILISLLLSLLTSQLFPPVASFITVSIICYLFANGCIIIVILISQLVFYVAAV 840

Query: 541  VHAFIKIRWQVWEENVRPTFFSQFVNLFSNFFSLKVLRIIRGNLTVTIALVSVILFCFVH 720
            VH FIK RWQ+WE N R TFF  F+NL S+ FS KV+R +R N  +  ALV++ L CFVH
Sbjct: 841  VHVFIKTRWQLWEGNFRFTFFHWFINLSSSIFSFKVVRALRANPLLVTALVAITLVCFVH 900

Query: 721  PXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKRE---FDSKTKVALGKSNFKPNSGFD 891
            P                     F  ASFRSHAR++E   + ++    + +   K     +
Sbjct: 901  PALGLFILLFSHALCCHNALCGFFTASFRSHARRKELIDYINEGNGGVEQFQLKDEGELN 960

Query: 892  PLLPLEEKSPNNPNSTRSYGDTQIKTFNHRHGXXXXXXXXXXMFVPSFVAWFQRIGVGQS 1071
              +PL+E   ++PNS +S+ DTQ++ F+HRHG          MFVPS VAWFQRIG+GQS
Sbjct: 961  QSVPLDESYSSSPNSAKSFSDTQLEIFHHRHGILILHLLAALMFVPSLVAWFQRIGMGQS 1020

Query: 1072 FPWFLDSALCVGVVLHGLCGSKPEYNFISFPFLHIQG-QQVGLSIVYMLDGFYRYLSGLA 1248
            FPW LDSALCVGV+ HG+C SKPE+N + FPF  I G Q+V  S +Y+  G Y YLSGLA
Sbjct: 1021 FPWLLDSALCVGVIFHGICDSKPEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLA 1080

Query: 1249 LAPYRAFYAMAAVGVI 1296
            LAPYR FYAMAA+G+I
Sbjct: 1081 LAPYRVFYAMAAIGLI 1096



 Score = 24.6 bits (52), Expect(2) = e-121
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 1295 YVLRILEKSYRDKGEAYFS 1351
            +  +I+E+  R+KGEAY S
Sbjct: 1098 FTFKIIERRSREKGEAYVS 1116


>ref|XP_002526926.1| conserved hypothetical protein [Ricinus communis]
            gi|223533678|gb|EEF35413.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1110

 Score =  424 bits (1091), Expect = e-116
 Identities = 223/434 (51%), Positives = 272/434 (62%), Gaps = 2/434 (0%)
 Frame = +1

Query: 1    CFPPVAIAWDSTSGLHVIPNLYSETISVDSSPAFWDSTQESDMTTVLLLLDPHCSFTIGA 180
            CFPPVA+AWD TSGLH+ PNLYSETI VDSSPA W +T+ S+ TTVLLL+DPHCS+ +  
Sbjct: 652  CFPPVALAWDPTSGLHIFPNLYSETIIVDSSPALWSATKGSERTTVLLLVDPHCSYKMSV 711

Query: 181  GVSVTTAAGRFLLLYCSEIVGFSIAIIFFALMRQARAWELDLPLPSLLAAVEXXXXXXXX 360
             VS T AA RFLLLY S+IVGFSIA+IFFALMRQA AW+ DLP+PS+L+AVE        
Sbjct: 712  AVSETAAASRFLLLYSSQIVGFSIAVIFFALMRQAHAWDADLPVPSVLSAVESNLRLPLP 771

Query: 361  XXXXXXXXXXXXXXXXXXXXXXFPPLSSFFIVSIICYAFANGXXXXXXXXXXXXXYFTAN 540
                                   PP +SF IVS+ICY FANG             Y  A 
Sbjct: 772  FLLLGIIPILISLFISFLLSQPLPPFASFIIVSVICYLFANGSMILLIFVSQLVFYAAAI 831

Query: 541  VHAFIKIRWQVWEENVRPTFFSQFVNLFSNFFSLKVLRIIRGNLTVTIALVSVILFCFVH 720
            +H FIK RWQ  E N R  F   F+NL S+FF LKV+R++R N ++  AL ++ L CFVH
Sbjct: 832  IHVFIKTRWQGQEGNFRLGFLHWFLNLSSSFFQLKVVRVLRVNPSLVTALTAITLGCFVH 891

Query: 721  PXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKRE-FDSKTKVALGKSNFKPNSGF-DP 894
            P                     FL ASFRSHAR++E FD K +       F  ++G  + 
Sbjct: 892  PALGLFILLLSHALCCHNALCGFLTASFRSHARRKELFDCKDEENKRSQEFASSNGVCNH 951

Query: 895  LLPLEEKSPNNPNSTRSYGDTQIKTFNHRHGXXXXXXXXXXMFVPSFVAWFQRIGVGQSF 1074
              PLEE S N+PNS++S+GDTQ++ F+HRHG          MFVPS VAW QRIG+G SF
Sbjct: 952  NSPLEENSSNSPNSSKSFGDTQLEIFHHRHGLLILHFLAALMFVPSLVAWLQRIGLGHSF 1011

Query: 1075 PWFLDSALCVGVVLHGLCGSKPEYNFISFPFLHIQGQQVGLSIVYMLDGFYRYLSGLALA 1254
            PWFLDSALC+GV+LHG+  +KPE N   F    IQG+++ L  VY+L G+Y YL GL L 
Sbjct: 1012 PWFLDSALCIGVILHGILNTKPECN-SQFSLSVIQGRELRLDFVYLLAGYYSYLYGLGLE 1070

Query: 1255 PYRAFYAMAAVGVI 1296
            PYR FYAMAAVG I
Sbjct: 1071 PYRVFYAMAAVGFI 1084


>ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|222847333|gb|EEE84880.1|
            predicted protein [Populus trichocarpa]
          Length = 834

 Score =  405 bits (1040), Expect = e-110
 Identities = 214/435 (49%), Positives = 265/435 (60%), Gaps = 3/435 (0%)
 Frame = +1

Query: 1    CFPPVAIAWDSTSGLHVIPNLYSETISVDSSPAFWDSTQESDMTTVLLLLDPHCSFTIGA 180
            CFPPVA+AWD TSGLH++PNL+SETI VDSSPA W STQ S+ TT++LL+DPHCS+    
Sbjct: 381  CFPPVALAWDHTSGLHILPNLFSETIMVDSSPALWSSTQGSEKTTIMLLVDPHCSYKARI 440

Query: 181  GVSVTTAAGRFLLLYCSEIVGFSIAIIFFALMRQARAWELDLPLPSLLAAVEXXXXXXXX 360
             VS T AA RFLLLY S+IVGFSIA+IFFALMRQA AW+LDLP+PS+L AVE        
Sbjct: 441  AVSETAAASRFLLLYSSQIVGFSIAVIFFALMRQAHAWDLDLPMPSMLVAVESNLRIPWP 500

Query: 361  XXXXXXXXXXXXXXXXXXXXXXFPPLSSFFIVSIICYAFANGXXXXXXXXXXXXXYFTAN 540
                                   PPL+SF  VS ICY FANG             Y  A 
Sbjct: 501  FLLLGFVPILFSLFISLLKSQPLPPLASFVFVSTICYVFANGSVILLVLVSQLVFYGVAI 560

Query: 541  VHAFIKIRWQVWEENVRPTFFSQFVNLFSNFFSLKVLRIIRGNLTVTIALVSVILFCFVH 720
            +H FIK RWQ  E N+   F   F+NL S FFSLKV+R++R N  +  AL ++ L CFV 
Sbjct: 561  IHVFIKSRWQECEGNICLAFLHWFINLSSGFFSLKVVRVLRVNPLLVTALTAITLGCFVQ 620

Query: 721  PXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKREFDSKTKVALGKSN---FKPNSGFD 891
            P                         +  SHAR +E      V   +S     K ++G D
Sbjct: 621  PALGLFILILSHALCCHN--------ALCSHARMKELLDFKDVGNERSQQFASKHDAGLD 672

Query: 892  PLLPLEEKSPNNPNSTRSYGDTQIKTFNHRHGXXXXXXXXXXMFVPSFVAWFQRIGVGQS 1071
                LEE S ++P+S+RS+GDTQ++ F+HRHG          MFVPSFVAW QRIG+G S
Sbjct: 673  QNFQLEENSSSSPDSSRSFGDTQLEIFHHRHGLLILHLLAALMFVPSFVAWLQRIGMGHS 732

Query: 1072 FPWFLDSALCVGVVLHGLCGSKPEYNFISFPFLHIQGQQVGLSIVYMLDGFYRYLSGLAL 1251
            FPWFLDSALC+GV+LHG+  SKPE+N + F F  I G++V L  +Y+L G+Y Y++GL L
Sbjct: 733  FPWFLDSALCIGVILHGILNSKPEFNSM-FSFPEIFGKEVRLDFIYLLAGYYSYVAGLGL 791

Query: 1252 APYRAFYAMAAVGVI 1296
             PYR FYAMAA+G I
Sbjct: 792  VPYRVFYAMAAIGFI 806


>ref|XP_003555152.1| PREDICTED: uncharacterized protein LOC100810572 [Glycine max]
          Length = 1116

 Score =  387 bits (993), Expect = e-105
 Identities = 199/435 (45%), Positives = 256/435 (58%), Gaps = 3/435 (0%)
 Frame = +1

Query: 1    CFPPVAIAWDSTSGLHVIPNLYSETISVDSSPAFWDSTQESDMTTVLLLLDPHCSFTIGA 180
            CFPPVA+AWD TSGLHV PNL SETI VDSSPA W STQ+S+ T VLLL+DPHCS+    
Sbjct: 654  CFPPVALAWDDTSGLHVYPNLNSETIVVDSSPAHWSSTQKSEKTIVLLLVDPHCSYKSSI 713

Query: 181  GVSVTTAAGRFLLLYCSEIVGFSIAIIFFALMRQARAWELDLPLPSLLAAVEXXXXXXXX 360
             +SV+ AA RFLLLY  +IVGFSIA++FFALMRQA +W+LDL +PS+L AVE        
Sbjct: 714  SISVSAAASRFLLLYSPKIVGFSIAVVFFALMRQACSWDLDLRIPSMLTAVESNLTLISH 773

Query: 361  XXXXXXXXXXXXXXXXXXXXXXFPPLSSFFIVSIICYAFANGXXXXXXXXXXXXXYFTAN 540
                                   PP +SF  +S+ICY FANG             +  A 
Sbjct: 774  FFPLAILPIFFSLFLLLLMSQPLPPFASFISISLICYIFANGFIAILILISHLVFFVAAV 833

Query: 541  VHAFIKIRWQVWEENVRPTFFSQFVNLFSNFFSLKVLRIIRGNLTVTIALVSVILFCFVH 720
             H FIK RWQ+WE NV   F   FVN  S+FFSLKV+R++R N  + +A+ +++L   VH
Sbjct: 834  THIFIKTRWQMWERNVSFFFLRWFVNHSSSFFSLKVVRVLRANPVIVMAVTAMVLASLVH 893

Query: 721  PXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKRE-FDSKTKVALG--KSNFKPNSGFD 891
            P                     FL AS R+H +  E FD  ++  +G  +  FK +  F 
Sbjct: 894  PSFGLLILLFSHFLCCHNALCSFLTASCRNHEQNNENFDCNSEDYMGSERLKFKFDGSFK 953

Query: 892  PLLPLEEKSPNNPNSTRSYGDTQIKTFNHRHGXXXXXXXXXXMFVPSFVAWFQRIGVGQS 1071
               P E+   N+P+S++S+GDTQ+  F+HRHG          MF PS  AWFQR+ +G+S
Sbjct: 954  RTFPSEDNYSNSPDSSKSFGDTQLDLFHHRHGLLILHLVATMMFAPSVAAWFQRLALGES 1013

Query: 1072 FPWFLDSALCVGVVLHGLCGSKPEYNFISFPFLHIQGQQVGLSIVYMLDGFYRYLSGLAL 1251
             PW LDS LC+GV+LHG+C SKPE+N     +  I    V L  +Y++ G++ Y SGL L
Sbjct: 1014 LPWLLDSVLCIGVILHGICNSKPEFNSFFLSYTGIPICNVRLYFIYLIAGYWSYFSGLTL 1073

Query: 1252 APYRAFYAMAAVGVI 1296
            APY AFY M AVG I
Sbjct: 1074 APYSAFYVMGAVGGI 1088


>tpg|DAA60843.1| TPA: hypothetical protein ZEAMMB73_930037 [Zea mays]
          Length = 1104

 Score =  370 bits (950), Expect = e-100
 Identities = 190/438 (43%), Positives = 267/438 (60%), Gaps = 5/438 (1%)
 Frame = +1

Query: 1    CFPPVAIAWDSTSGLHVIPNLYSETISVDSSPAFWDSTQESDMTTVLLLLDPHCSFTIGA 180
            CFPPVA+AWDS SGLH+IPN+YSET+ VDSSPAFWDS + +D TTVL+L DPHCS+ + +
Sbjct: 647  CFPPVALAWDSVSGLHIIPNIYSETVVVDSSPAFWDSPEGTDKTTVLILADPHCSYEVTS 706

Query: 181  GVSVTTAAGRFLLLYCSEIVGFSIAIIFFALMRQARAWELDLPLPSLLAAVEXXXXXXXX 360
              S++ AA RF LLY SEI+GF +AI+FF +MRQ  AWE D  +PS+L+A+E        
Sbjct: 707  RASLSDAASRFFLLYSSEILGFMVAIMFFGIMRQTSAWECDSSMPSILSAIESNLGLPKA 766

Query: 361  XXXXXXXXXXXXXXXXXXXXXXFPPLSSFFIVSIICYAFANGXXXXXXXXXXXXXYFTAN 540
                                   PP  +F +V++ICY  ANG             Y  A 
Sbjct: 767  FMFLCFMPILVFCAFFIFTAEQKPPFGTFLLVTLICYIVANGFTILLILSSKLLLYVVAI 826

Query: 541  VHAFIKIRWQVWEENVRPTFFSQFVNLFSNFFSLKVLRIIRGNLTVTIALVSVILFCFVH 720
            +H F K RWQ W   V+  F  QF++ FS+F S+K+++++R N  + +A+ ++ L C VH
Sbjct: 827  LHVFTKRRWQSWGNGVQSAFLGQFLS-FSSFQSVKIVQMLRNNPNIIVAVATLPLVCLVH 885

Query: 721  PXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKRE-FDSKT---KVALGKSNFKPNSGF 888
            P                     FLAASFRS  +K++ + SK     V L KS    + G 
Sbjct: 886  PAIGLGLLLLSHAFHAHSNLCSFLAASFRSITQKKDLYKSKMGDGSVLLSKSK---SDGL 942

Query: 889  DPLLPLEEKSPNNPNSTRSYGDTQIKTFNHRHGXXXXXXXXXXMFVPSFVAWFQRIGVGQ 1068
              LLP+++    +P +++S+ D+Q++ F++RHG          MFVPS VAW QRIG+GQ
Sbjct: 943  QQLLPMDD----SPTASKSFTDSQLELFDYRHGVMILHLLSTLMFVPSLVAWLQRIGMGQ 998

Query: 1069 SFPWFLDSALCVGVVLHGLCGSKPEYN-FISFPFLHIQGQQVGLSIVYMLDGFYRYLSGL 1245
            +FPWF+DSA+CVGV+LHGL GS+P  +  I F     +G+++GLS +Y++ G+Y ++S +
Sbjct: 999  NFPWFIDSAICVGVILHGLFGSQPNVSCCIFFKLPGRRGREIGLSFLYLVGGYYSFVSSM 1058

Query: 1246 ALAPYRAFYAMAAVGVIC 1299
            ALAPYRA YAMA +G IC
Sbjct: 1059 ALAPYRALYAMATIGYIC 1076


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