BLASTX nr result

ID: Coptis25_contig00001391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001391
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267522.1| PREDICTED: uncharacterized protein LOC100260...   129   8e-28
ref|XP_002513604.1| conserved hypothetical protein [Ricinus comm...   126   7e-27
gb|AFK42684.1| unknown [Lotus japonicus]                              122   1e-25
emb|CBI22553.3| unnamed protein product [Vitis vinifera]               99   3e-25
ref|XP_003602173.1| hypothetical protein MTR_3g090640 [Medicago ...   117   3e-24

>ref|XP_002267522.1| PREDICTED: uncharacterized protein LOC100260370 [Vitis vinifera]
           gi|147771502|emb|CAN66995.1| hypothetical protein
           VITISV_019167 [Vitis vinifera]
          Length = 221

 Score =  129 bits (325), Expect = 8e-28
 Identities = 65/81 (80%), Positives = 70/81 (86%)
 Frame = +1

Query: 595 PTKSSATDPLVSKYIASGLSREAVPFAVANYGDNPTKVREFVDKYNLLREMGFSSSNVAE 774
           P+  S  DP+VSKYIASGLSREAVP AVANYGDN TKVREF + Y LLREMGFSSSNVAE
Sbjct: 141 PSMGSTADPVVSKYIASGLSREAVPLAVANYGDNETKVREFTNGYTLLREMGFSSSNVAE 200

Query: 775 ALAMYDNDHEKALAYFLNSSS 837
           AL MYDND +KALA+FLNSSS
Sbjct: 201 ALVMYDNDTDKALAHFLNSSS 221



 Score =  110 bits (276), Expect = 4e-22
 Identities = 61/133 (45%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
 Frame = +2

Query: 41  MDFDYRNKV-PPYEAQIPMYRXXXXXXXXXXXX------FYPKVGHPV--GXXXXXXXXX 193
           M +DYRN+   PY++QIPMY+                   YP+V  P             
Sbjct: 1   MSYDYRNRANQPYDSQIPMYKTTTSSSSSAPGHQLYGAPMYPRVSQPSFGAVPPPGRASS 60

Query: 194 XXXXXXXXXXXGLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEKE 373
                      GLGIRV+IKPE+RI+PPPQL P + +IPRSTFQFDFD E+K+LAEAEK+
Sbjct: 61  YQQTSAPSSSPGLGIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKILAEAEKD 120

Query: 374 SPNWSQLVSENVP 412
           S NWS+L  EN+P
Sbjct: 121 SQNWSRLGLENLP 133


>ref|XP_002513604.1| conserved hypothetical protein [Ricinus communis]
           gi|223547512|gb|EEF49007.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score =  126 bits (317), Expect = 7e-27
 Identities = 62/77 (80%), Positives = 71/77 (92%)
 Frame = +1

Query: 607 SATDPLVSKYIASGLSREAVPFAVANYGDNPTKVREFVDKYNLLREMGFSSSNVAEALAM 786
           SA DP+VSKYIASGL+REAVP AVANYGDNPTKVREFV+ ++LLREMGFS++NVAEAL M
Sbjct: 146 SAADPVVSKYIASGLNREAVPLAVANYGDNPTKVREFVNGFSLLREMGFSANNVAEALLM 205

Query: 787 YDNDHEKALAYFLNSSS 837
           YDND +KAL +FLNSSS
Sbjct: 206 YDNDTDKALTHFLNSSS 222



 Score =  108 bits (269), Expect = 3e-21
 Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
 Frame = +2

Query: 41  MDFDYRNKVP--PYEAQIPMYRXXXXXXXXXXXXF----YPKVGHPVGXXXXXXXXXXXX 202
           MD+D+RN+     Y++Q PMYR            +    YP++G   G            
Sbjct: 1   MDYDFRNRTTGSSYDSQTPMYRTTSSSTPSGHPMYGQSLYPRIGQQQGHTPVPPVGRHSS 60

Query: 203 XXXXXXXX----GLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEK 370
                       GLGIRV +KPEYRITPPPQL P M DIPRS FQF FD ER++LAEAEK
Sbjct: 61  YHQSSAPPPSSSGLGIRVSVKPEYRITPPPQLAPQMGDIPRSNFQFHFDLERRILAEAEK 120

Query: 371 ESPNWSQLVSENVP 412
           +  NWS+L  EN+P
Sbjct: 121 DIQNWSKLGLENLP 134


>gb|AFK42684.1| unknown [Lotus japonicus]
          Length = 211

 Score =  122 bits (306), Expect = 1e-25
 Identities = 62/108 (57%), Positives = 77/108 (71%)
 Frame = +1

Query: 514 GTVSNPMGSKYGNSGYKRDAGASYGDNPTKSSATDPLVSKYIASGLSREAVPFAVANYGD 693
           G   NP  SK+G              +  K +++DP VSKYIA GL+REAVP A+ +YGD
Sbjct: 104 GEKDNPNWSKFGLENLPTKVSDHTSSSSPKVTSSDPTVSKYIAMGLNREAVPIAIGHYGD 163

Query: 694 NPTKVREFVDKYNLLREMGFSSSNVAEALAMYDNDHEKALAYFLNSSS 837
           NPTKV+EFV+ Y LLREMGFSSS+VAEAL M+DND +KALA+FL+ SS
Sbjct: 164 NPTKVQEFVNGYTLLREMGFSSSSVAEALVMHDNDTDKALAHFLSGSS 211



 Score =  105 bits (262), Expect = 2e-20
 Identities = 61/125 (48%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
 Frame = +2

Query: 41  MDFDYRNKVPPYEAQIPMYRXXXXXXXXXXXXFYPKVG-HPVGXXXXXXXXXXXXXXXXX 217
           MD+D+R +    + Q PMYR             YPK+G HP G                 
Sbjct: 1   MDYDFRTRSG--QQQPPMYRAPPSSSSPSS--IYPKIGPHPPGAAVGRPSSYHQNPAPPS 56

Query: 218 XXXGLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEKESPNWSQLV 397
              GLGIRV IKP+YRITPPP LLP + DIPRS FQFDF  ERKVLAE EK++PNWS+  
Sbjct: 57  SS-GLGIRVAIKPDYRITPPPHLLPHVVDIPRSNFQFDFGLERKVLAEGEKDNPNWSKFG 115

Query: 398 SENVP 412
            EN+P
Sbjct: 116 LENLP 120


>emb|CBI22553.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score = 99.0 bits (245), Expect(3) = 3e-25
 Identities = 45/62 (72%), Positives = 55/62 (88%)
 Frame = +2

Query: 227 GLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEKESPNWSQLVSEN 406
           GLGIRV+IKPE+RI+PPPQL P + +IPRSTFQFDFD E+K+LAEAEK+S NWS+L  EN
Sbjct: 33  GLGIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKILAEAEKDSQNWSRLGLEN 92

Query: 407 VP 412
           +P
Sbjct: 93  LP 94



 Score = 32.0 bits (71), Expect(3) = 3e-25
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +2

Query: 713 NLLINTIFSEKWDSHQAMLLK 775
           NL + T   EKWDSHQAMLLK
Sbjct: 165 NLPMATPSCEKWDSHQAMLLK 185



 Score = 31.6 bits (70), Expect(3) = 3e-25
 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
 Frame = +1

Query: 514 GTVSNPMGSKYGNSGYKRDAG----ASYGDNPTKSS 609
           G+ ++P+ SKY  SG  R+A     A+YGDN TKS+
Sbjct: 105 GSTADPVVSKYIASGLSREAVPLAVANYGDNETKSN 140



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 595 PTKSSATDPLVSKYIASGLSREAVPFAVANYGDNPTK 705
           P+  S  DP+VSKYIASGLSREAVP AVANYGDN TK
Sbjct: 102 PSMGSTADPVVSKYIASGLSREAVPLAVANYGDNETK 138


>ref|XP_003602173.1| hypothetical protein MTR_3g090640 [Medicago truncatula]
           gi|355491221|gb|AES72424.1| hypothetical protein
           MTR_3g090640 [Medicago truncatula]
          Length = 203

 Score =  117 bits (294), Expect = 3e-24
 Identities = 62/104 (59%), Positives = 73/104 (70%)
 Frame = +1

Query: 526 NPMGSKYGNSGYKRDAGASYGDNPTKSSATDPLVSKYIASGLSREAVPFAVANYGDNPTK 705
           NP  +K+G       A  S     +K +  DP+V+KYIA GLSR+ VP AV NYGDNPTK
Sbjct: 102 NPNWTKFGVENLPTKASDS--SPSSKVTTADPIVNKYIAMGLSRDVVPIAVKNYGDNPTK 159

Query: 706 VREFVDKYNLLREMGFSSSNVAEALAMYDNDHEKALAYFLNSSS 837
           V+EFV  Y LL EMGFSS++V EAL MYDND +KALAYFLN SS
Sbjct: 160 VQEFVKGYTLLHEMGFSSNSVDEALLMYDNDTDKALAYFLNGSS 203



 Score =  100 bits (249), Expect = 5e-19
 Identities = 56/125 (44%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
 Frame = +2

Query: 41  MDFDY-RNKVPPYEAQIPMYRXXXXXXXXXXXXFYPKVGHPVGXXXXXXXXXXXXXXXXX 217
           M+++Y R++  P   Q+PMYR             YPK+G                     
Sbjct: 1   MEYEYNRSRSGP---QVPMYRAPPS--------IYPKIGPHPHSAAPRPPPFQHQNPNPS 49

Query: 218 XXXGLGIRVMIKPEYRITPPPQLLPLMEDIPRSTFQFDFDFERKVLAEAEKESPNWSQLV 397
              GLGI+V IKPEY+I PPP LLP + DIPRS FQFDF  ERK+LAEAEKE+PNW++  
Sbjct: 50  PSIGLGIKVAIKPEYKIAPPPHLLPHVGDIPRSNFQFDFGLERKILAEAEKENPNWTKFG 109

Query: 398 SENVP 412
            EN+P
Sbjct: 110 VENLP 114


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