BLASTX nr result
ID: Coptis25_contig00001389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001389
(1973 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003541126.1| PREDICTED: arginine decarboxylase-like [Glyc... 505 0.0
ref|XP_002331411.1| predicted protein [Populus trichocarpa] gi|2... 477 0.0
ref|XP_003606834.1| Arginine decarboxylase [Medicago truncatula]... 483 0.0
ref|XP_002526238.1| Arginine decarboxylase, putative [Ricinus co... 478 0.0
ref|XP_003606837.1| Arginine decarboxylase [Medicago truncatula]... 471 e-176
>ref|XP_003541126.1| PREDICTED: arginine decarboxylase-like [Glycine max]
Length = 560
Score = 505 bits (1300), Expect(2) = 0.0
Identities = 258/376 (68%), Positives = 307/376 (81%)
Frame = +1
Query: 118 MASALSPLEMGFPSNVSADRLRCVKRFRSFSIRVTTEGTVREIETENEKKGKGSIRSTQS 297
M++ L PL +N S RL C + VT+ G ++E G+ +IR+
Sbjct: 11 MSNWLCPLHFPDFANTSTFRLHCSQERSLAPPSVTSVG-------QDESIGRIAIRNDHV 63
Query: 298 ITDSEIPIDSCQNQGAPPLVSALKASAEQDTASFYFPGHNRGQAAPSSLTHLIGTKPFLH 477
+ ++ P+ Q G PPLVSALKASAEQ+ ASF+FPGHNRG+AAP+SLT LIGT+PF+H
Sbjct: 64 LRNNS-PV--LQQNGLPPLVSALKASAEQNVASFHFPGHNRGRAAPASLTRLIGTRPFVH 120
Query: 478 DLPELPELDNLFSPKGSILDAQKEAAKLFGSSETWFLVGGSTCGVQAAIMATCSPGDLLI 657
DLPELPELDNLF P+G IL+AQ EAAKLFGSS+TWFLVGG+TCG+QAAIMATCSPG+ LI
Sbjct: 121 DLPELPELDNLFCPQGPILEAQTEAAKLFGSSQTWFLVGGTTCGIQAAIMATCSPGEFLI 180
Query: 658 LPRNSHISATSAMVLSGAVPKYIMPEYNSDWDIAGGVTPSQVEIALRELEMEGRKAAAVL 837
LPRNSHISA SA+VLSGAVPKYI+P+Y +DWDIAGGVTP QV A++ELEMEG+KAAAV
Sbjct: 181 LPRNSHISAISALVLSGAVPKYIVPDYENDWDIAGGVTPLQVLKAIQELEMEGKKAAAVF 240
Query: 838 VTSPTYHGICSDLSKIAMLCHSHGIPMIVDEAHGAHFRFHRELPCSALEQGADLAVQSTH 1017
+TSPTYHGICS+LS+I+ LCHSH IP++VDEAHGAHF FH ELP SAL+QGADL VQSTH
Sbjct: 241 ITSPTYHGICSNLSEISELCHSHKIPLLVDEAHGAHFGFHTELPNSALQQGADLTVQSTH 300
Query: 1018 KVLCSLTQSSMLHMSGDIIDREKICRCLQVLQSTSPSYLLLASLDAARAQLSKKPETIFN 1197
KVLCSLTQSSMLHMSG+I+D+EKI RCLQ LQSTSPSYLLLASLDAARAQLS+ P+ +FN
Sbjct: 301 KVLCSLTQSSMLHMSGNIVDKEKISRCLQTLQSTSPSYLLLASLDAARAQLSESPDVVFN 360
Query: 1198 ETMVLALEAKRLIKRI 1245
+ M LA EAK ++KRI
Sbjct: 361 QAMALAYEAKCMLKRI 376
Score = 178 bits (452), Expect(2) = 0.0
Identities = 91/157 (57%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
Frame = +3
Query: 1332 LALSGYKADDILFRGHGIIPELVGTCSLTFAINLGTRRDHVLRLISGLENLSRTFAR-NT 1508
+ LSGY+AD+IL+ +G++ ELVG S+T+A NLGT RDHV RL+SG+++L+ T+
Sbjct: 405 VGLSGYEADEILYGDYGVVCELVGNKSITYAFNLGTCRDHVQRLLSGIKHLAATYVTIQQ 464
Query: 1509 AEAKVEGVECAPFRDINMSMNPREAFFAKKRTVSIRDSPGEVCGELICPYPPGIPVLFPG 1688
E +V V APF D S+ PR+AFFA KR V+I++S GE+ GELICPYPPGIPVL PG
Sbjct: 465 PEERVLTVH-APFDDKITSLIPRDAFFASKRKVTIKESIGEISGELICPYPPGIPVLIPG 523
Query: 1689 EIITQAALNFLLDVRTRGAEIVGASDPLLSSIVVCTV 1799
E+IT+ A+++LL VR++G +I GASDPLLSSIVVC V
Sbjct: 524 EVITKKAVDYLLHVRSKGGDITGASDPLLSSIVVCNV 560
>ref|XP_002331411.1| predicted protein [Populus trichocarpa] gi|222873625|gb|EEF10756.1|
predicted protein [Populus trichocarpa]
Length = 484
Score = 477 bits (1228), Expect(2) = 0.0
Identities = 229/299 (76%), Positives = 270/299 (90%)
Frame = +1
Query: 349 PLVSALKASAEQDTASFYFPGHNRGQAAPSSLTHLIGTKPFLHDLPELPELDNLFSPKGS 528
PLV ALKASAE++ ASF+FPGHNRG+AAPSSLT LIG +PF+HDLPELPELDNLFSP+G
Sbjct: 1 PLVGALKASAEKNAASFHFPGHNRGRAAPSSLTQLIGLRPFIHDLPELPELDNLFSPEGP 60
Query: 529 ILDAQKEAAKLFGSSETWFLVGGSTCGVQAAIMATCSPGDLLILPRNSHISATSAMVLSG 708
IL+AQ +AAKLFGSSETWFLVGG+TCG+QAAIMATCSPG+ ++LPRNSHISA SAMVLSG
Sbjct: 61 ILEAQMQAAKLFGSSETWFLVGGTTCGIQAAIMATCSPGEHIVLPRNSHISAISAMVLSG 120
Query: 709 AVPKYIMPEYNSDWDIAGGVTPSQVEIALRELEMEGRKAAAVLVTSPTYHGICSDLSKIA 888
A+PKYIMP Y+ WDIAGGVTP QV A++ELEM+G+K AAV +TSPTYHGICS+LS+I+
Sbjct: 121 AIPKYIMPGYDCKWDIAGGVTPLQVGKAIKELEMDGKKPAAVFITSPTYHGICSNLSEIS 180
Query: 889 MLCHSHGIPMIVDEAHGAHFRFHRELPCSALEQGADLAVQSTHKVLCSLTQSSMLHMSGD 1068
LCH++GIP+IVDEAHGAH FH ++P SAL+QGADL VQSTHKVLCSLTQSSMLHMSG+
Sbjct: 181 QLCHAYGIPVIVDEAHGAHLGFHPQMPHSALKQGADLVVQSTHKVLCSLTQSSMLHMSGN 240
Query: 1069 IIDREKICRCLQVLQSTSPSYLLLASLDAARAQLSKKPETIFNETMVLALEAKRLIKRI 1245
I+DR++ICRCLQ LQSTSPSYLLLASLDAARAQL++ P T+FN+ + LA+EA LIK+I
Sbjct: 241 IVDRDRICRCLQTLQSTSPSYLLLASLDAARAQLAENPGTVFNKALELAIEASTLIKKI 299
Score = 203 bits (516), Expect(2) = 0.0
Identities = 103/157 (65%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
Frame = +3
Query: 1332 LALSGYKADDILFRGHGIIPELVGTCSLTFAINLGTRRDHVLRLISGLENL-SRTFARNT 1508
L LSGY+ADDIL R HG+I ELVGT S+TFAINLGT R+H RL+SGL+ L + + T
Sbjct: 328 LGLSGYEADDILDRDHGVISELVGTQSITFAINLGTCREHNQRLVSGLKKLPTSSLHSKT 387
Query: 1509 AEAKVEGVECAPFRDINMSMNPREAFFAKKRTVSIRDSPGEVCGELICPYPPGIPVLFPG 1688
E +VE E APF DI +S+NPR+AFFA KR+VS+R+S G+VCGELICPYPPGIPV+ PG
Sbjct: 388 TEKRVESREHAPFNDICISLNPRDAFFANKRSVSVRESLGKVCGELICPYPPGIPVMIPG 447
Query: 1689 EIITQAALNFLLDVRTRGAEIVGASDPLLSSIVVCTV 1799
EIIT+ ALN+LLDVR +GA + GASD LSSIV+C V
Sbjct: 448 EIITERALNYLLDVRRKGAVVTGASDSHLSSIVICDV 484
>ref|XP_003606834.1| Arginine decarboxylase [Medicago truncatula]
gi|355507889|gb|AES89031.1| Arginine decarboxylase
[Medicago truncatula]
Length = 577
Score = 483 bits (1244), Expect(2) = 0.0
Identities = 239/325 (73%), Positives = 279/325 (85%), Gaps = 6/325 (1%)
Frame = +1
Query: 286 STQSITDSEIPIDSCQNQ------GAPPLVSALKASAEQDTASFYFPGHNRGQAAPSSLT 447
ST+SIT++ + C N G PPLVSALKASAE++ A+F+FPGHNRG AAP+S+T
Sbjct: 64 STESITNNP---NECSNSPEIRQSGLPPLVSALKASAEENAATFHFPGHNRGHAAPASMT 120
Query: 448 HLIGTKPFLHDLPELPELDNLFSPKGSILDAQKEAAKLFGSSETWFLVGGSTCGVQAAIM 627
LIG +P++HDLPELPELDNLF P+G IL+AQ EA+KLFGSSETWFLVGG+TCG+QAAIM
Sbjct: 121 RLIGRRPYVHDLPELPELDNLFCPQGPILEAQTEASKLFGSSETWFLVGGTTCGIQAAIM 180
Query: 628 ATCSPGDLLILPRNSHISATSAMVLSGAVPKYIMPEYNSDWDIAGGVTPSQVEIALRELE 807
ATCSPG+ LILPRN H+SA SAMVLSGAVPKYI+P+Y +DWDIAGGVTP QV A++ELE
Sbjct: 181 ATCSPGEFLILPRNCHLSAISAMVLSGAVPKYIVPDYKNDWDIAGGVTPLQVLSAIQELE 240
Query: 808 MEGRKAAAVLVTSPTYHGICSDLSKIAMLCHSHGIPMIVDEAHGAHFRFHRELPCSALEQ 987
+EG+KAAAV +TSPTYHGICS+LS I+ LCHS IP+IVDEAHGAH FH ELP SAL+Q
Sbjct: 241 LEGKKAAAVFITSPTYHGICSNLSDISELCHSRKIPLIVDEAHGAHLGFHSELPSSALQQ 300
Query: 988 GADLAVQSTHKVLCSLTQSSMLHMSGDIIDREKICRCLQVLQSTSPSYLLLASLDAARAQ 1167
GADL VQSTHKVLCSLTQSSMLHMSGDI+D+EKI RCLQ LQSTSPSYLLLASLDAARAQ
Sbjct: 301 GADLTVQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQSTSPSYLLLASLDAARAQ 360
Query: 1168 LSKKPETIFNETMVLALEAKRLIKR 1242
LS+ P+T+FN+ + LA EAK +KR
Sbjct: 361 LSESPDTVFNQAIELANEAKSSLKR 385
Score = 187 bits (475), Expect(2) = 0.0
Identities = 94/156 (60%), Positives = 120/156 (76%)
Frame = +3
Query: 1332 LALSGYKADDILFRGHGIIPELVGTCSLTFAINLGTRRDHVLRLISGLENLSRTFARNTA 1511
L LSGY+AD+IL+R GI+ ELVG S+T+A+NLGT RDHV RL+SG+++L+ T+
Sbjct: 415 LGLSGYEADEILYRDFGIVCELVGNKSITYALNLGTCRDHVQRLLSGIKHLAATYPSIQQ 474
Query: 1512 EAKVEGVECAPFRDINMSMNPREAFFAKKRTVSIRDSPGEVCGELICPYPPGIPVLFPGE 1691
E PF DI S+ PR+AFFA KR V+I++S G+V GELICPYPPGIPVL PGE
Sbjct: 475 PKDEVLTEHTPFDDIITSLTPRDAFFASKRKVTIKESIGKVSGELICPYPPGIPVLIPGE 534
Query: 1692 IITQAALNFLLDVRTRGAEIVGASDPLLSSIVVCTV 1799
+IT+ A+N+LL VR++GA+I GASDPLLSSIVVC V
Sbjct: 535 VITERAVNYLLHVRSKGADISGASDPLLSSIVVCNV 570
>ref|XP_002526238.1| Arginine decarboxylase, putative [Ricinus communis]
gi|223534432|gb|EEF36135.1| Arginine decarboxylase,
putative [Ricinus communis]
Length = 542
Score = 478 bits (1230), Expect(2) = 0.0
Identities = 238/337 (70%), Positives = 282/337 (83%), Gaps = 3/337 (0%)
Frame = +1
Query: 244 IETENEKKGKGSIRSTQSITDSEIPID---SCQNQGAPPLVSALKASAEQDTASFYFPGH 414
+ET +++ ++R T E I + Q PPLVSALKASA Q+ ASF+FPGH
Sbjct: 16 LETGKKQQRSSNLREAGLDTREESFISRSHATQLDKPPPLVSALKASAAQNAASFHFPGH 75
Query: 415 NRGQAAPSSLTHLIGTKPFLHDLPELPELDNLFSPKGSILDAQKEAAKLFGSSETWFLVG 594
NRG AAP+SLT LIG KPF+HDLPELPELDNLFSP+GSIL+AQ A+KLFGS ETWFLVG
Sbjct: 76 NRGYAAPTSLTQLIGLKPFIHDLPELPELDNLFSPEGSILEAQMLASKLFGSQETWFLVG 135
Query: 595 GSTCGVQAAIMATCSPGDLLILPRNSHISATSAMVLSGAVPKYIMPEYNSDWDIAGGVTP 774
G+TCG+QAAIM TCSPG+ +ILPRNSH+SA SA+VLSGA+PKYI+PEY+ +WDIAG VTP
Sbjct: 136 GTTCGIQAAIMTTCSPGEHIILPRNSHLSAISALVLSGAIPKYIIPEYDYNWDIAGAVTP 195
Query: 775 SQVEIALRELEMEGRKAAAVLVTSPTYHGICSDLSKIAMLCHSHGIPMIVDEAHGAHFRF 954
SQV A++ELEMEG+K AAV VTSPTYHGICS+LS+I+ +CHS G+P+IVDEAHGAH F
Sbjct: 196 SQVNKAMKELEMEGQKPAAVFVTSPTYHGICSNLSEISQVCHSRGVPLIVDEAHGAHLGF 255
Query: 955 HRELPCSALEQGADLAVQSTHKVLCSLTQSSMLHMSGDIIDREKICRCLQVLQSTSPSYL 1134
H ++P SAL+Q ADL VQSTHKVLCSLTQSSMLHMSG I++R++ICRCLQ LQSTSPSYL
Sbjct: 256 HPQMPRSALKQEADLVVQSTHKVLCSLTQSSMLHMSGKIVNRDRICRCLQTLQSTSPSYL 315
Query: 1135 LLASLDAARAQLSKKPETIFNETMVLALEAKRLIKRI 1245
LLASLDAARAQ+ + PETIFN+ M LA+EAK LIKRI
Sbjct: 316 LLASLDAARAQIDENPETIFNKAMELAIEAKDLIKRI 352
Score = 185 bits (470), Expect(2) = 0.0
Identities = 93/160 (58%), Positives = 120/160 (75%), Gaps = 6/160 (3%)
Frame = +3
Query: 1332 LALSGYKADDILFRGHGIIPELVGTCSLTFAINLGTRRDHVLRLISGLENLSR-TFARNT 1508
L LSGY+ADD L+R H ++ ELVGT S+TFA NLGT ++HV RL+SGL+ L+ + T
Sbjct: 381 LGLSGYEADDYLYRNHQVVAELVGTQSITFAFNLGTCKEHVQRLVSGLKELAACSLQSGT 440
Query: 1509 AEAKVEGVECAPFRDINMSMNPREAFFAKKRTVSIRDSPGEVCGELICPYPPGIPVLFPG 1688
E +++ F D++M +NPR+AFFA KR V IR+S GEVCGELICPYPPGIPV+ PG
Sbjct: 441 TEERLKEGGYLSFADVSMRLNPRDAFFANKRRVDIRESLGEVCGELICPYPPGIPVMIPG 500
Query: 1689 EIITQAALNFLLDVRTR-----GAEIVGASDPLLSSIVVC 1793
EIIT+ AL++LLDV+ + GA + GASDPLLSSIV+C
Sbjct: 501 EIITEGALDYLLDVKRKGAVVSGAXVSGASDPLLSSIVIC 540
>ref|XP_003606837.1| Arginine decarboxylase [Medicago truncatula]
gi|355507892|gb|AES89034.1| Arginine decarboxylase
[Medicago truncatula]
Length = 526
Score = 471 bits (1212), Expect(2) = e-176
Identities = 236/337 (70%), Positives = 280/337 (83%), Gaps = 3/337 (0%)
Frame = +1
Query: 244 IETENEKKGKGSIRSTQSITDSEIPIDSC---QNQGAPPLVSALKASAEQDTASFYFPGH 414
++ ++K G++ +T SIT++ + + Q G PPLVSALKASAE++ ASF+FPGH
Sbjct: 7 LQEYEQEKSIGTV-NTASITNNTVLFSNSPVLQQSGLPPLVSALKASAEENAASFHFPGH 65
Query: 415 NRGQAAPSSLTHLIGTKPFLHDLPELPELDNLFSPKGSILDAQKEAAKLFGSSETWFLVG 594
NRG AAPSSLT LIG +P+ HDL +PELDNLF P+G IL+AQ+EA+KLFGSSETWFLV
Sbjct: 66 NRGHAAPSSLTQLIGVRPYAHDLSSIPELDNLFCPQGPILEAQREASKLFGSSETWFLVN 125
Query: 595 GSTCGVQAAIMATCSPGDLLILPRNSHISATSAMVLSGAVPKYIMPEYNSDWDIAGGVTP 774
G+TCGVQAAIMATCSPG+ LILPRNSH+SA SAMVLSGA PKYI+P+Y +DWDIAGGVTP
Sbjct: 126 GTTCGVQAAIMATCSPGEYLILPRNSHLSAISAMVLSGASPKYIIPDYKNDWDIAGGVTP 185
Query: 775 SQVEIALRELEMEGRKAAAVLVTSPTYHGICSDLSKIAMLCHSHGIPMIVDEAHGAHFRF 954
QV A++ELE+EG+KAAAV +TSPTYHG+CS+LS I+ LCHS IP+IVDEAHGAH
Sbjct: 186 LQVLNAIQELELEGKKAAAVFITSPTYHGVCSNLSDISALCHSRKIPLIVDEAHGAHLGL 245
Query: 955 HRELPCSALEQGADLAVQSTHKVLCSLTQSSMLHMSGDIIDREKICRCLQVLQSTSPSYL 1134
H ELP SAL+QGADL VQSTHKVL SLTQSSMLHMSGDI+D+EKI RCLQ LQSTSPSYL
Sbjct: 246 HSELPSSALQQGADLTVQSTHKVLSSLTQSSMLHMSGDIVDKEKISRCLQTLQSTSPSYL 305
Query: 1135 LLASLDAARAQLSKKPETIFNETMVLALEAKRLIKRI 1245
LLASLDAARAQLS+ P +F + + LA EAK L+KRI
Sbjct: 306 LLASLDAARAQLSESPAIVFKQAIELANEAKFLLKRI 342
Score = 177 bits (448), Expect(2) = e-176
Identities = 89/156 (57%), Positives = 116/156 (74%)
Frame = +3
Query: 1332 LALSGYKADDILFRGHGIIPELVGTCSLTFAINLGTRRDHVLRLISGLENLSRTFARNTA 1511
L LSGY+A++IL R GI+ ELVG S+T+ +NLGT RDHV RL+SG + L+ ++
Sbjct: 371 LGLSGYQANEILCRDFGIVRELVGYKSITYVLNLGTCRDHVQRLLSGAKYLAAVYSSIQQ 430
Query: 1512 EAKVEGVECAPFRDINMSMNPREAFFAKKRTVSIRDSPGEVCGELICPYPPGIPVLFPGE 1691
+ APF DI MS+ PR+AFFA KR V +++S G+V GEL+CPYPPGIPVL PGE
Sbjct: 431 RKDKVLTDHAPFDDIIMSLTPRDAFFASKRKVMVKESIGKVSGELVCPYPPGIPVLIPGE 490
Query: 1692 IITQAALNFLLDVRTRGAEIVGASDPLLSSIVVCTV 1799
+IT+ A+++LL VR+ GA+I GASDPLLSSIVVC V
Sbjct: 491 VITEKAVDYLLHVRSEGADISGASDPLLSSIVVCNV 526