BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001383
         (3430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26126.3| unnamed protein product [Vitis vinifera]              491   0.0  
gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrog...   491   0.0  
ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate deh...   486   e-180
ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydr...   469   e-175
ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus c...   458   e-175

>emb|CBI26126.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  491 bits (1265), Expect(2) = 0.0
 Identities = 247/372 (66%), Positives = 288/372 (77%)
 Frame = +3

Query: 1623 VSVLLFLIHHFHVITKAHCYVASCIIVTLLNAIYFCRPKWEGGLYEGXXXXXXXXXXXXM 1802
            V V L  +  F+        +  C + TL    +  RPKWEGG YEG            M
Sbjct: 16   VEVRLDTLKRFNPRQDLEVLIRKCPLPTL----FTYRPKWEGGQYEGDENSRRDALRLAM 71

Query: 1803 ELGANYIDVELQVAREFIDSIHGKRPKNFKIIVSSHNYERTPTFEEIGDLVARIQATGAD 1982
            ELGA+Y+D+EL+VA EFI+SIHG++P+ FK+IVSSHNY+ TP+ E++G+LV  IQATGAD
Sbjct: 72   ELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGAD 131

Query: 1983 IVKIATTARDITDVSHMFQITVHSQVPIIGLVMSERGLISRLLCPKFGGYLTFGTVEAGI 2162
            IVKIATTA +ITDV+ +FQITVHSQVP+IGLVM ERGLISR+LCPKF GYLTFG++E GI
Sbjct: 132  IVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSGYLTFGSLEPGI 191

Query: 2163 VSAPGQPTIKDLLSVYNFRQMGPDTKVFGLIGKPVGHSKGPILYNRAFKSVGFNGVYVPL 2342
            VSAPGQPTIKDLL++YNFRQ+GPDTKVFG+IGKPV HSK P LYN AFKSVGFNGVYV L
Sbjct: 192  VSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVYVHL 251

Query: 2343 LVDDVAKFLSTYTSSDFTGFSCTIPHKEAALQCCDEVDPIAKSIGAVNLIIKRPSDGKLV 2522
            LVDD+AKF  TY+++DF GFSCTIPHKEAAL+CCDEV P+AKSIGAVN II+RPSDGKL 
Sbjct: 252  LVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDGKLF 311

Query: 2523 GYNTDYVGAISAIEDGLRGSYKTANATGSPLFGKTFVVIXXXXXXXXXXXXXXXXXXRVV 2702
            GYNTDYVGAISAIEDGLR  +K ++ +GSPL GK FVVI                  RVV
Sbjct: 312  GYNTDYVGAISAIEDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVV 371

Query: 2703 IANRTYERAREL 2738
            IANRTY RAREL
Sbjct: 372  IANRTYARAREL 383



 Score =  176 bits (445), Expect(2) = 0.0
 Identities = 85/109 (77%), Positives = 98/109 (89%)
 Frame = +2

Query: 2813 ADLVGGIALSSAELESFRPEVGMILANTTSIGMQPKVEETPLAKHALSNYSLVFDAVYTP 2992
            AD VGG ALS A+L +F PE GMILANTTSIGMQPKV+ETP++KHAL  YSLVFDA+YTP
Sbjct: 384  ADAVGGDALSLADLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTP 443

Query: 2993 KLTRLLREAEESGAVTVSGLEMFIGQAYEQYERFTGMPAPKELFKEIVS 3139
            K+TRLLREA+ESGA  V+GLEMFIGQAYEQ+ERFTG+PAPKELFK+ +S
Sbjct: 444  KITRLLREAQESGATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQFIS 492


>gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
            regia]
          Length = 508

 Score =  491 bits (1263), Expect(2) = 0.0
 Identities = 241/343 (70%), Positives = 281/343 (81%)
 Frame = +3

Query: 1710 LNAIYFCRPKWEGGLYEGXXXXXXXXXXXXMELGANYIDVELQVAREFIDSIHGKRPKNF 1889
            L  ++  RPKWEGG Y+G            ME GA+YIDVELQVA EF DSI+G++P+N 
Sbjct: 55   LPTLFTYRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENS 114

Query: 1890 KIIVSSHNYERTPTFEEIGDLVARIQATGADIVKIATTARDITDVSHMFQITVHSQVPII 2069
            K+IVSSHNY+ TP+ E++G+LVARIQATGADIVKIATTA +I DV+ +FQITVHSQVPII
Sbjct: 115  KVIVSSHNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPII 174

Query: 2070 GLVMSERGLISRLLCPKFGGYLTFGTVEAGIVSAPGQPTIKDLLSVYNFRQMGPDTKVFG 2249
            G+VM ERG +SR+LCPKFGG+LTFGT+E+GIVSAPGQPT+KDLL +YN R++GPDTKVFG
Sbjct: 175  GIVMGERGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFG 234

Query: 2250 LIGKPVGHSKGPILYNRAFKSVGFNGVYVPLLVDDVAKFLSTYTSSDFTGFSCTIPHKEA 2429
            +IGKPV HSK PILYN AFKSV FNGVY+PLLVDD+A FL TY+S+DF GFSCTIPHKEA
Sbjct: 235  IIGKPVHHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTYSSTDFAGFSCTIPHKEA 294

Query: 2430 ALQCCDEVDPIAKSIGAVNLIIKRPSDGKLVGYNTDYVGAISAIEDGLRGSYKTANATGS 2609
            AL+CCDEVDP+AKSIGAVN II+RP+DGKLVGYNTDYVGAISAIEDGLRGS+ ++N   S
Sbjct: 295  ALKCCDEVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSHNSSNTADS 354

Query: 2610 PLFGKTFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYERAREL 2738
            PL GK FVVI                  RVVIANRTY+RAREL
Sbjct: 355  PLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRAREL 397



 Score =  173 bits (438), Expect(2) = 0.0
 Identities = 83/109 (76%), Positives = 100/109 (91%)
 Frame = +2

Query: 2813 ADLVGGIALSSAELESFRPEVGMILANTTSIGMQPKVEETPLAKHALSNYSLVFDAVYTP 2992
            AD +GG ALS A+L++F PE GMILAN+TSIGMQPKV+ETP+ KHAL +YSLVFDAVYTP
Sbjct: 398  ADTIGGDALSLADLDNFHPEDGMILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTP 457

Query: 2993 KLTRLLREAEESGAVTVSGLEMFIGQAYEQYERFTGMPAPKELFKEIVS 3139
            K+TRLLREAEESGA  V+GLEMFIGQAYEQ+ERFTG+PAPKELF+++++
Sbjct: 458  KMTRLLREAEESGAKIVTGLEMFIGQAYEQFERFTGLPAPKELFRKVMA 506


>ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
            dehydrogenase, chloroplastic-like [Vitis vinifera]
          Length = 522

 Score =  486 bits (1251), Expect(2) = e-180
 Identities = 247/375 (65%), Positives = 288/375 (76%), Gaps = 3/375 (0%)
 Frame = +3

Query: 1623 VSVLLFLIHHFHVITKAHCYVASCIIVTLLNAIYFCRPKWEGGLYEGXXXXXXXXXXXXM 1802
            V V L  +  F+        +  C + TL    +  RPKWEGG YEG            M
Sbjct: 40   VEVRLDTLKRFNPRQDLEVLIRKCPLPTL----FTYRPKWEGGQYEGDENSRRDALRLAM 95

Query: 1803 ELGANYIDVELQVAREFIDSIHGKRPKNFKIIVSSHNYERTPTFEEIGDLVARIQATGAD 1982
            ELGA+Y+D+EL+VA EFI+SIHG++P+ FK+IVSSHNY+ TP+ E++G+LV  IQATGAD
Sbjct: 96   ELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGNLVVSIQATGAD 155

Query: 1983 IVKIATTARDITDVSHMFQITVHSQV---PIIGLVMSERGLISRLLCPKFGGYLTFGTVE 2153
            IVKIATTA +ITDV+ +FQITVHSQV   P+IGLVM ERGLISR+LCPKF GYLTFG++E
Sbjct: 156  IVKIATTALEITDVARIFQITVHSQVSSVPVIGLVMGERGLISRILCPKFSGYLTFGSLE 215

Query: 2154 AGIVSAPGQPTIKDLLSVYNFRQMGPDTKVFGLIGKPVGHSKGPILYNRAFKSVGFNGVY 2333
             GIVSAPGQPTIKDLL++YNFRQ+GPDTKVFG+IGKPV HSK P LYN AFKSVGFNGVY
Sbjct: 216  PGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFKSVGFNGVY 275

Query: 2334 VPLLVDDVAKFLSTYTSSDFTGFSCTIPHKEAALQCCDEVDPIAKSIGAVNLIIKRPSDG 2513
            V LLVDD+AKF  TY+++DF GFSCTIPHKEAAL+CCDEV P+AKSIGAVN II+RPSDG
Sbjct: 276  VHLLVDDIAKFFHTYSAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVNCIIRRPSDG 335

Query: 2514 KLVGYNTDYVGAISAIEDGLRGSYKTANATGSPLFGKTFVVIXXXXXXXXXXXXXXXXXX 2693
            KL GYNTDYVGAISAIEDGLR  +K ++ +GSPL GK FVVI                  
Sbjct: 336  KLFGYNTDYVGAISAIEDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGKALAYGAKEKGA 395

Query: 2694 RVVIANRTYERAREL 2738
            RVVIANRTY RAREL
Sbjct: 396  RVVIANRTYARAREL 410



 Score =  176 bits (445), Expect(2) = e-180
 Identities = 85/109 (77%), Positives = 98/109 (89%)
 Frame = +2

Query: 2813 ADLVGGIALSSAELESFRPEVGMILANTTSIGMQPKVEETPLAKHALSNYSLVFDAVYTP 2992
            AD VGG ALS A+L +F PE GMILANTTSIGMQPKV+ETP++KHAL  YSLVFDA+YTP
Sbjct: 411  ADAVGGDALSLADLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTP 470

Query: 2993 KLTRLLREAEESGAVTVSGLEMFIGQAYEQYERFTGMPAPKELFKEIVS 3139
            K+TRLLREA+ESGA  V+GLEMFIGQAYEQ+ERFTG+PAPKELFK+ +S
Sbjct: 471  KITRLLREAQESGATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQFIS 519


>ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa] gi|222863514|gb|EEF00645.1| dehydroquinate
            dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa]
          Length = 538

 Score =  469 bits (1208), Expect(2) = e-175
 Identities = 235/352 (66%), Positives = 273/352 (77%)
 Frame = +3

Query: 1683 VASCIIVTLLNAIYFCRPKWEGGLYEGXXXXXXXXXXXXMELGANYIDVELQVAREFIDS 1862
            + + I+ + L  ++  RP WEGG Y G            MELGA+YIDVEL+VA EF + 
Sbjct: 76   IKTLILHSPLPTLFTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNEL 135

Query: 1863 IHGKRPKNFKIIVSSHNYERTPTFEEIGDLVARIQATGADIVKIATTARDITDVSHMFQI 2042
            + G +P   K+IVSSHNYE TP+ EE+G+LVARIQA GADIVKIATTA DI+DV+ +FQI
Sbjct: 136  LRGNKPGKCKLIVSSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQI 195

Query: 2043 TVHSQVPIIGLVMSERGLISRLLCPKFGGYLTFGTVEAGIVSAPGQPTIKDLLSVYNFRQ 2222
            TVHSQVPIIGLVM ERGLISR+LC KFGGYLTFGT+E+G+VSAPGQPTIKDLL +YNFR 
Sbjct: 196  TVHSQVPIIGLVMGERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRL 255

Query: 2223 MGPDTKVFGLIGKPVGHSKGPILYNRAFKSVGFNGVYVPLLVDDVAKFLSTYTSSDFTGF 2402
            +GPDTKVFG+IGKPVGHSK P+L+N AFKSVG NGVYV LLVDD+A+FL TY+S+DF GF
Sbjct: 256  IGPDTKVFGIIGKPVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTYSSTDFAGF 315

Query: 2403 SCTIPHKEAALQCCDEVDPIAKSIGAVNLIIKRPSDGKLVGYNTDYVGAISAIEDGLRGS 2582
            SCTIPHKE A +CCDEV P+AKSIGAVN II+R +DGKL GYNTDYVGAISAIE+GLR S
Sbjct: 316  SCTIPHKEDAAKCCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRAS 375

Query: 2583 YKTANATGSPLFGKTFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYERAREL 2738
               +N  GSPL GK FVVI                  RVVIANRTYERA+ L
Sbjct: 376  QNVSNTVGSPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVL 427



 Score =  175 bits (444), Expect(2) = e-175
 Identities = 85/111 (76%), Positives = 103/111 (92%)
 Frame = +2

Query: 2813 ADLVGGIALSSAELESFRPEVGMILANTTSIGMQPKVEETPLAKHALSNYSLVFDAVYTP 2992
            AD++GG A++ A+LE+F PE GMILANTTSIGMQPKV+ETP++K+AL +YSLVFDAVYTP
Sbjct: 428  ADIIGGDAITLADLENFHPEDGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTP 487

Query: 2993 KLTRLLREAEESGAVTVSGLEMFIGQAYEQYERFTGMPAPKELFKEIVSKY 3145
            K+TRLLREAEESGA  V+GLEMFIGQAYEQ+ERFT +PAPKELF++I+SKY
Sbjct: 488  KITRLLREAEESGAKIVTGLEMFIGQAYEQFERFTELPAPKELFQKIMSKY 538


>ref|XP_002516856.1| shikimate dehydrogenase, putative [Ricinus communis]
            gi|223543944|gb|EEF45470.1| shikimate dehydrogenase,
            putative [Ricinus communis]
          Length = 539

 Score =  458 bits (1179), Expect(2) = e-175
 Identities = 229/343 (66%), Positives = 266/343 (77%)
 Frame = +3

Query: 1710 LNAIYFCRPKWEGGLYEGXXXXXXXXXXXXMELGANYIDVELQVAREFIDSIHGKRPKNF 1889
            L  ++  RPKWEGG Y+G            MELGA+YIDVEL+VA +F DSI G +P   
Sbjct: 86   LPTLFTYRPKWEGGEYDGDENERLDALRLAMELGADYIDVELKVAHKFNDSIRGNKPAKC 145

Query: 1890 KIIVSSHNYERTPTFEEIGDLVARIQATGADIVKIATTARDITDVSHMFQITVHSQVPII 2069
            K+IVSSHNY  TP+ E++G+LVA IQA GADIVKIATTA DITDV+ +FQITVHSQVPII
Sbjct: 146  KVIVSSHNYHNTPSVEDLGNLVADIQAAGADIVKIATTALDITDVARIFQITVHSQVPII 205

Query: 2070 GLVMSERGLISRLLCPKFGGYLTFGTVEAGIVSAPGQPTIKDLLSVYNFRQMGPDTKVFG 2249
            G+VM ERGLISR+LC KFGGYLTFGT+E+GIVSAPGQP IKDLL +YNFRQ+GPDTKV+G
Sbjct: 206  GIVMGERGLISRILCAKFGGYLTFGTLESGIVSAPGQPMIKDLLDLYNFRQIGPDTKVYG 265

Query: 2250 LIGKPVGHSKGPILYNRAFKSVGFNGVYVPLLVDDVAKFLSTYTSSDFTGFSCTIPHKEA 2429
            +IGKPVGHSK P+LYN AFKSVGFNGVYV LLVDD+A FL T++S+DF GFSCTIPHKEA
Sbjct: 266  IIGKPVGHSKSPVLYNEAFKSVGFNGVYVHLLVDDIASFLQTFSSTDFAGFSCTIPHKEA 325

Query: 2430 ALQCCDEVDPIAKSIGAVNLIIKRPSDGKLVGYNTDYVGAISAIEDGLRGSYKTANATGS 2609
            A+ CCD +D +A+SIGAVN II+R  DGKL GYNTDY GAI+AIE+GLR S   + A  S
Sbjct: 326  AVDCCDGIDSVARSIGAVNCIIRRQRDGKLFGYNTDYDGAITAIEEGLRVSQNISGAADS 385

Query: 2610 PLFGKTFVVIXXXXXXXXXXXXXXXXXXRVVIANRTYERAREL 2738
            PL GK FVVI                  +VVIANRTYERA+ L
Sbjct: 386  PLAGKLFVVIGAGGAGKALAYGAKQKGAKVVIANRTYERAKGL 428



 Score =  185 bits (470), Expect(2) = e-175
 Identities = 89/111 (80%), Positives = 103/111 (92%)
 Frame = +2

Query: 2813 ADLVGGIALSSAELESFRPEVGMILANTTSIGMQPKVEETPLAKHALSNYSLVFDAVYTP 2992
            AD VGG+A++ A+L +FRPE GM+LANTTSIGMQPKVEETP+ KHAL NYSLVFDAVYTP
Sbjct: 429  ADAVGGVAIALADLGNFRPESGMVLANTTSIGMQPKVEETPIPKHALRNYSLVFDAVYTP 488

Query: 2993 KLTRLLREAEESGAVTVSGLEMFIGQAYEQYERFTGMPAPKELFKEIVSKY 3145
            K+TRLLREAEESGA TVSGLEMFIGQAYEQ+E FTG+PAPKELF++I+SK+
Sbjct: 489  KITRLLREAEESGAATVSGLEMFIGQAYEQFENFTGLPAPKELFRKIMSKH 539