BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001378
         (1130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241171.1| uncharacterized protein LOC100785835 [Glycin...   454   e-125
ref|XP_003531078.1| PREDICTED: 26S proteasome non-ATPase regulat...   454   e-125
gb|ACU23821.1| unknown [Glycine max]                                  446   e-123
ref|XP_002264255.1| PREDICTED: 26S proteasome non-ATPase regulat...   444   e-122
ref|XP_003589038.1| 26S proteasome non-ATPase regulatory subunit...   443   e-122

>ref|NP_001241171.1| uncharacterized protein LOC100785835 [Glycine max]
            gi|255634606|gb|ACU17665.1| unknown [Glycine max]
          Length = 267

 Score =  454 bits (1169), Expect = e-125
 Identities = 226/267 (84%), Positives = 239/267 (89%)
 Frame = -1

Query: 1100 MDPKLTQVSQLFDRFKAAFVRNDLDNCTNLLSQLKVLLTGFRSLPPLFEQSPNAVHELTI 921
            MDPKL +VSQLFDRFKA+F+RND D C+NLLSQLKVLLTGFRSLPPLF  +PNAVHELTI
Sbjct: 1    MDPKLKEVSQLFDRFKASFIRNDFDTCSNLLSQLKVLLTGFRSLPPLFADTPNAVHELTI 60

Query: 920  ARDVYEHAVVLSVKAEDQEAFERDFFQLKPYYTDIGSLLPPSPQEYPILGLSLLRLLVQN 741
            ARD+YEHAVVLSVK EDQ+AFERDFFQLKPYYTD  + LPPSPQEYPILGL+LLRLLVQN
Sbjct: 61   ARDIYEHAVVLSVKNEDQDAFERDFFQLKPYYTDACNRLPPSPQEYPILGLNLLRLLVQN 120

Query: 740  RIAEFHXXXXXXXXXXXENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLA 561
            RIAEFH           ENPCIKHAVELEQSFMEGAYNRVLSARQ VPH+TYVYFMDLLA
Sbjct: 121  RIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHDTYVYFMDLLA 180

Query: 560  KTVRDELAGCGEKAYDYLSASDAKQMLMFSSDQEFFEYIKEERPDWEIKNGLVFFQKAKE 381
            KTVRDE+AGC EKAYDYLS  DAKQML+FSSDQE  EYIKEE P+WEIKNG VFFQKAKE
Sbjct: 181  KTVRDEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNGSVFFQKAKE 240

Query: 380  SAPCKEIPSLQLINQTLSYARELERIV 300
            SAPCKEIPSLQLINQTLSYARELERIV
Sbjct: 241  SAPCKEIPSLQLINQTLSYARELERIV 267


>ref|XP_003531078.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit RPN12A-like
            [Glycine max]
          Length = 267

 Score =  454 bits (1167), Expect = e-125
 Identities = 226/267 (84%), Positives = 239/267 (89%)
 Frame = -1

Query: 1100 MDPKLTQVSQLFDRFKAAFVRNDLDNCTNLLSQLKVLLTGFRSLPPLFEQSPNAVHELTI 921
            MDPKL +VSQLFDRFKA+F+RND DNC+NLLSQLKVLLTGFRSLPPLF  +PNAVHELTI
Sbjct: 1    MDPKLKEVSQLFDRFKASFLRNDFDNCSNLLSQLKVLLTGFRSLPPLFADTPNAVHELTI 60

Query: 920  ARDVYEHAVVLSVKAEDQEAFERDFFQLKPYYTDIGSLLPPSPQEYPILGLSLLRLLVQN 741
            ARD+YEHAVVLSVK EDQ+AFERDFFQLKPYYTD  + LPPSPQEYPILGL+LLRLLVQN
Sbjct: 61   ARDIYEHAVVLSVKIEDQDAFERDFFQLKPYYTDACNRLPPSPQEYPILGLNLLRLLVQN 120

Query: 740  RIAEFHXXXXXXXXXXXENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLA 561
            RIAEFH           ENPCIKHAVELEQSFMEGAYNRVLSARQ VPH+TYVYFMDLLA
Sbjct: 121  RIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHDTYVYFMDLLA 180

Query: 560  KTVRDELAGCGEKAYDYLSASDAKQMLMFSSDQEFFEYIKEERPDWEIKNGLVFFQKAKE 381
            KTVRDE+AGC EKAYDYLS  DAKQML+FSSDQE  EYIKEE P+WEIKN  VFFQKAKE
Sbjct: 181  KTVRDEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNDSVFFQKAKE 240

Query: 380  SAPCKEIPSLQLINQTLSYARELERIV 300
            SAPCKEIPSLQLINQTLSYARELERIV
Sbjct: 241  SAPCKEIPSLQLINQTLSYARELERIV 267


>gb|ACU23821.1| unknown [Glycine max]
          Length = 267

 Score =  446 bits (1148), Expect = e-123
 Identities = 223/267 (83%), Positives = 236/267 (88%)
 Frame = -1

Query: 1100 MDPKLTQVSQLFDRFKAAFVRNDLDNCTNLLSQLKVLLTGFRSLPPLFEQSPNAVHELTI 921
            MDPKL +VSQLFDRFKA+F+RND DNC+NLLSQLKVLLTGFRSLPPLF  +PNAVHELTI
Sbjct: 1    MDPKLKEVSQLFDRFKASFLRNDFDNCSNLLSQLKVLLTGFRSLPPLFADTPNAVHELTI 60

Query: 920  ARDVYEHAVVLSVKAEDQEAFERDFFQLKPYYTDIGSLLPPSPQEYPILGLSLLRLLVQN 741
            ARD+YEHAVVLSVK EDQ+AFERDFFQLKPYYTD  + LPPSPQEYPILGL+LLRLLVQN
Sbjct: 61   ARDIYEHAVVLSVKIEDQDAFERDFFQLKPYYTDACNRLPPSPQEYPILGLNLLRLLVQN 120

Query: 740  RIAEFHXXXXXXXXXXXENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLA 561
            RIAEFH           ENPCIKHAVELEQSFMEGAYNRVLSARQ VPH+TYVYFMDLLA
Sbjct: 121  RIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHDTYVYFMDLLA 180

Query: 560  KTVRDELAGCGEKAYDYLSASDAKQMLMFSSDQEFFEYIKEERPDWEIKNGLVFFQKAKE 381
            KTVRDE+AGC EKAYDYLS  DAKQML+FSSDQE  EYIKEE P+WEIKN  VFFQKAKE
Sbjct: 181  KTVRDEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNDSVFFQKAKE 240

Query: 380  SAPCKEIPSLQLINQTLSYARELERIV 300
             APCKEIP LQLINQTLSYAR LERIV
Sbjct: 241  FAPCKEIPFLQLINQTLSYARGLERIV 267


>ref|XP_002264255.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit RPN12A [Vitis
            vinifera] gi|297742385|emb|CBI34534.3| unnamed protein
            product [Vitis vinifera]
          Length = 267

 Score =  444 bits (1143), Expect = e-122
 Identities = 223/267 (83%), Positives = 235/267 (88%)
 Frame = -1

Query: 1100 MDPKLTQVSQLFDRFKAAFVRNDLDNCTNLLSQLKVLLTGFRSLPPLFEQSPNAVHELTI 921
            MDPKL +VSQ  +RFKAAFVR+D D CT LLSQLKVLLT FRSLPPLFE SPNAVHEL I
Sbjct: 1    MDPKLREVSQGLERFKAAFVRSDFDTCTKLLSQLKVLLTEFRSLPPLFEDSPNAVHELKI 60

Query: 920  ARDVYEHAVVLSVKAEDQEAFERDFFQLKPYYTDIGSLLPPSPQEYPILGLSLLRLLVQN 741
            ARD+YEHAVVLSVK EDQ+AFERDFFQLKPYYTD G  LPPSPQEYPILGL+LLRLLVQN
Sbjct: 61   ARDIYEHAVVLSVKTEDQDAFERDFFQLKPYYTDTGGRLPPSPQEYPILGLNLLRLLVQN 120

Query: 740  RIAEFHXXXXXXXXXXXENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLA 561
            RIAEFH           EN CIKHAVELEQSFMEGAYNRVLSARQ VPHETYVYFMDLLA
Sbjct: 121  RIAEFHTELELLSATALENACIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 180

Query: 560  KTVRDELAGCGEKAYDYLSASDAKQMLMFSSDQEFFEYIKEERPDWEIKNGLVFFQKAKE 381
            KTVRDE+AGC EKAYDYLS +DA+ ML+FSSDQE FEYIKEE P+WEIKNG VFFQ+AKE
Sbjct: 181  KTVRDEIAGCSEKAYDYLSINDARHMLLFSSDQELFEYIKEEHPEWEIKNGHVFFQRAKE 240

Query: 380  SAPCKEIPSLQLINQTLSYARELERIV 300
            SAPCKEIPSLQLINQTLSYARELERIV
Sbjct: 241  SAPCKEIPSLQLINQTLSYARELERIV 267


>ref|XP_003589038.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
            gi|217074312|gb|ACJ85516.1| unknown [Medicago truncatula]
            gi|355478086|gb|AES59289.1| 26S proteasome non-ATPase
            regulatory subunit [Medicago truncatula]
          Length = 267

 Score =  443 bits (1140), Expect = e-122
 Identities = 220/267 (82%), Positives = 237/267 (88%)
 Frame = -1

Query: 1100 MDPKLTQVSQLFDRFKAAFVRNDLDNCTNLLSQLKVLLTGFRSLPPLFEQSPNAVHELTI 921
            MDPK T+VSQLFDRFKAAF+RND D+ +NLLSQLKVLLTGFRSLPPLF  +PNAV ELTI
Sbjct: 1    MDPKFTEVSQLFDRFKAAFLRNDFDSASNLLSQLKVLLTGFRSLPPLFADTPNAVQELTI 60

Query: 920  ARDVYEHAVVLSVKAEDQEAFERDFFQLKPYYTDIGSLLPPSPQEYPILGLSLLRLLVQN 741
            ARD+YEHAVVLSVK EDQ+AFERDFFQLKPYYTD  + LP SPQEYPILGL+LLRLLVQN
Sbjct: 61   ARDIYEHAVVLSVKIEDQDAFERDFFQLKPYYTDARNRLPQSPQEYPILGLNLLRLLVQN 120

Query: 740  RIAEFHXXXXXXXXXXXENPCIKHAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLA 561
            RIAEFH           ENPCIKHAVELEQSFMEGAYNRVLSARQ VPHETYVYFMDLLA
Sbjct: 121  RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 180

Query: 560  KTVRDELAGCGEKAYDYLSASDAKQMLMFSSDQEFFEYIKEERPDWEIKNGLVFFQKAKE 381
            KT+RDE+AGC EKAYDYLS +DAKQML+F+ DQE  EYIKEE P+WEIKNG V+FQKAK+
Sbjct: 181  KTIRDEIAGCSEKAYDYLSINDAKQMLLFTKDQELLEYIKEEHPEWEIKNGSVYFQKAKD 240

Query: 380  SAPCKEIPSLQLINQTLSYARELERIV 300
            SAPCKEIPSLQLINQTLSYARELERIV
Sbjct: 241  SAPCKEIPSLQLINQTLSYARELERIV 267