BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001365
         (1475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [...   407   e-111
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   407   e-111
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_002316405.1| predicted protein [Populus trichocarpa] gi|2...   403   e-110
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [...   400   e-109

>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  407 bits (1047), Expect = e-111
 Identities = 208/298 (69%), Positives = 252/298 (84%), Gaps = 1/298 (0%)
 Frame = +1

Query: 217  HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 396
            +IRFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRNHEFFPGT+DRIIM+SGA ++I 
Sbjct: 37   YIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQ 96

Query: 397  KAMELIMSKLLSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXXATIKSFIEESQAGI 576
            +A+ELI+SKLLSE+HSED D+ ++P++KVRL+VPN SC        ATI+SFIE+SQAGI
Sbjct: 97   RAVELILSKLLSELHSED-DNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGI 155

Query: 577  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIILILSKLMEDTHYMQSMTAPFTYAGVNFSG 756
            KISPQD+NY G +DRLVTLTGS DEQM+AI LI+SKL ED HY QSM +PF+Y GV FSG
Sbjct: 156  KISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNSPFSYPGVYFSG 215

Query: 757  FHGVQYGYLVPPVGAVPYNAINYGPNGAR-GKFQNNKEDRSSSVTIGIADEHIXXXXXXX 933
            + GV Y Y++P V    YNA+NY PNGA  GK QN+KE+RS+S+T+G+ADEHI       
Sbjct: 216  YQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRG 275

Query: 934  XXNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 1107
              NIMEI+QASGARIKISDRGD++SGT+DRKVTITGSQ+AIR AE+MI++KVA A+ER
Sbjct: 276  GRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  407 bits (1046), Expect = e-111
 Identities = 217/297 (73%), Positives = 245/297 (82%)
 Frame = +1

Query: 217  HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 396
            +IRFLVSNAAAGSVIGKGGSTI +FQSQSGARIQLSRNHEFFPGTSDRIIMISGA ++II
Sbjct: 35   YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEII 94

Query: 397  KAMELIMSKLLSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXXATIKSFIEESQAGI 576
            KAMELI++KLLSE+H+EDGD++ DPRSKVRLIVPNSSC        +TIKSFIE+SQA I
Sbjct: 95   KAMELILAKLLSEMHTEDGDEA-DPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASI 153

Query: 577  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIILILSKLMEDTHYMQSMTAPFTYAGVNFSG 756
            KISPQD+NY+GL+DRLVTL GSL+EQM+AI LILSKL ED HY Q M APF+YA      
Sbjct: 154  KISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAA---- 209

Query: 757  FHGVQYGYLVPPVGAVPYNAINYGPNGARGKFQNNKEDRSSSVTIGIADEHIXXXXXXXX 936
                             YN++NYGPNGA GKFQNNKEDRS+SVTIG+ADEHI        
Sbjct: 210  -----------------YNSMNYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGG 252

Query: 937  XNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 1107
             NIM+I+QASGARIKISDRGDFMSGT+DRKVTITGSQ+AIRAAE+MIM+KVASASER
Sbjct: 253  RNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 309


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  407 bits (1046), Expect = e-111
 Identities = 217/297 (73%), Positives = 245/297 (82%)
 Frame = +1

Query: 217  HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 396
            +IRFLVSNAAAGSVIGKGGSTI +FQSQSGARIQLSRNHEFFPGTSDRIIMISGA ++II
Sbjct: 83   YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEII 142

Query: 397  KAMELIMSKLLSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXXATIKSFIEESQAGI 576
            KAMELI++KLLSE+H+EDGD++ DPRSKVRLIVPNSSC        +TIKSFIE+SQA I
Sbjct: 143  KAMELILAKLLSEMHTEDGDEA-DPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASI 201

Query: 577  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIILILSKLMEDTHYMQSMTAPFTYAGVNFSG 756
            KISPQD+NY+GL+DRLVTL GSL+EQM+AI LILSKL ED HY Q M APF+YA      
Sbjct: 202  KISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAA---- 257

Query: 757  FHGVQYGYLVPPVGAVPYNAINYGPNGARGKFQNNKEDRSSSVTIGIADEHIXXXXXXXX 936
                             YN++NYGPNGA GKFQNNKEDRS+SVTIG+ADEHI        
Sbjct: 258  -----------------YNSMNYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGG 300

Query: 937  XNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 1107
             NIM+I+QASGARIKISDRGDFMSGT+DRKVTITGSQ+AIRAAE+MIM+KVASASER
Sbjct: 301  RNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357


>ref|XP_002316405.1| predicted protein [Populus trichocarpa] gi|222865445|gb|EEF02576.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  403 bits (1035), Expect = e-110
 Identities = 204/299 (68%), Positives = 249/299 (83%)
 Frame = +1

Query: 217  HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 396
            + RFLVSNAAAGSVIGKGG+TIT+FQSQSGARIQLSRN+EFFPGTSDRIIM+SG  DD++
Sbjct: 36   YTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVL 95

Query: 397  KAMELIMSKLLSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXXATIKSFIEESQAGI 576
            KA+ELI++KLLSE+ +EDGD++ +PR +VRL+VPNS+C        + IKSFIEES AGI
Sbjct: 96   KAVELIIAKLLSEIPAEDGDEA-EPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGI 154

Query: 577  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIILILSKLMEDTHYMQSMTAPFTYAGVNFSG 756
            KISP D  + GL+DRLVT+TG+L+EQM AI LILSKL +D HY Q+M APF+YAGV FSG
Sbjct: 155  KISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSG 214

Query: 757  FHGVQYGYLVPPVGAVPYNAINYGPNGARGKFQNNKEDRSSSVTIGIADEHIXXXXXXXX 936
            F G+QY  ++P V    YN++N+GPNGA  KFQ+NK+D ++SVTIG+ADEHI        
Sbjct: 215  FDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQHNKDDITNSVTIGVADEHIGLVVGRGG 274

Query: 937  XNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASERET 1113
             NIMEI+Q SGAR+KISDRGDFMSGT+DRK+TITGSQ+AIRAAE MIM+KV+ ASERET
Sbjct: 275  RNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASERET 333


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  400 bits (1029), Expect = e-109
 Identities = 204/298 (68%), Positives = 249/298 (83%), Gaps = 1/298 (0%)
 Frame = +1

Query: 217  HIRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTSDRIIMISGAFDDII 396
            +IRFLVSN+AAGSVIGKGGSTIT+FQSQSGARIQLSRNHEFFPGT+DRIIM+SGA ++I 
Sbjct: 37   YIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQ 96

Query: 397  KAMELIMSKLLSEVHSEDGDDSSDPRSKVRLIVPNSSCXXXXXXXXATIKSFIEESQAGI 576
            +A+ELI+SKLLSE+HSED D+ ++P++KVRL+VPN SC         TI+SFIE+SQAGI
Sbjct: 97   RAVELILSKLLSELHSED-DNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGI 155

Query: 577  KISPQDHNYIGLSDRLVTLTGSLDEQMQAIILILSKLMEDTHYMQSMTAPFTYAGVNFSG 756
            KISPQD+NY G +DRLV LTG+ DEQM+AI LI+SKL ED HY QSM +PF+Y GV FSG
Sbjct: 156  KISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSMNSPFSYPGVYFSG 215

Query: 757  FHGVQYGYLVPPVGAVPYNAINYGPNG-ARGKFQNNKEDRSSSVTIGIADEHIXXXXXXX 933
            + GV Y Y++P V    YNA+NY PNG A GK QN+KE+RS+S+T+G+ADEHI       
Sbjct: 216  YQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMGVADEHIGLVVGRG 275

Query: 934  XXNIMEINQASGARIKISDRGDFMSGTSDRKVTITGSQQAIRAAETMIMEKVASASER 1107
              NIMEI+Q SGARIKISDRGD++SGT+DRKVTITGSQ+AIR AE+MI++KVA A+ER
Sbjct: 276  GRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333