BLASTX nr result

ID: Coptis25_contig00001361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001361
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25376.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like ...   127   4e-27
ref|XP_004146441.1| PREDICTED: 40S ribosomal protein S26-1-like ...   127   4e-27
ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like ...   127   4e-27
ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like ...   127   4e-27

>emb|CBI25376.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score =  127 bits (320), Expect = 3e-27
 Identities = 68/97 (70%), Positives = 69/97 (71%), Gaps = 10/97 (10%)
 Frame = -2

Query: 833 SNPSPQG----------KMTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVR 684
           SNPSP             MTF             HVKFIRCSNCGKCCPKDKAIKRFLVR
Sbjct: 9   SNPSPAQFAAPRTRSLTVMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVR 68

Query: 683 NIVEQAAVRDVQEACVNEGYTLPKLYAKMQYCVSCAI 573
           NIVEQAAVRDVQEACV + YTLPKLYAKMQYCVSCAI
Sbjct: 69  NIVEQAAVRDVQEACVYDTYTLPKLYAKMQYCVSCAI 105


>ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  127 bits (318), Expect = 4e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -2

Query: 809 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 630
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 629 GYTLPKLYAKMQYCVSCAI 573
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  QYTLPKLYAKMQYCVSCAI 79


>ref|XP_004146441.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  127 bits (318), Expect = 4e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -2

Query: 809 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 630
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 629 GYTLPKLYAKMQYCVSCAI 573
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  QYTLPKLYAKMQYCVSCAI 79


>ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
           gi|449514728|ref|XP_004164463.1| PREDICTED: 40S
           ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  127 bits (318), Expect = 4e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -2

Query: 809 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 630
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 629 GYTLPKLYAKMQYCVSCAI 573
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  QYTLPKLYAKMQYCVSCAI 79


>ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like [Vitis vinifera]
          Length = 124

 Score =  127 bits (318), Expect = 4e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -2

Query: 809 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 630
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 629 GYTLPKLYAKMQYCVSCAI 573
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  TYTLPKLYAKMQYCVSCAI 79


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