BLASTX nr result

ID: Coptis25_contig00001351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001351
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268941.1| PREDICTED: 60S ribosomal protein L22-2 [Viti...   150   2e-34
ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34
gb|ABK94308.1| unknown [Populus trichocarpa]                          150   3e-34
gb|ABK92957.1| unknown [Populus trichocarpa]                          150   3e-34
ref|XP_002516939.1| 60S ribosomal protein L22, putative [Ricinus...   149   5e-34

>ref|XP_002268941.1| PREDICTED: 60S ribosomal protein L22-2 [Vitis vinifera]
           gi|296083360|emb|CBI22996.3| unnamed protein product
           [Vitis vinifera]
          Length = 125

 Score =  150 bits (379), Expect = 2e-34
 Identities = 75/96 (78%), Positives = 83/96 (86%)
 Frame = -1

Query: 590 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITITRDKNKISVTSDNAFSXX 411
           FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS+T+TRDK+KI+VTS+++FS  
Sbjct: 19  FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSESSFSKR 78

Query: 410 XXXXXXXXXXXKHNVRDWLRVIASNKERNVYELRYF 303
                      KHNVRDWLRVIASNK+RNVYELRYF
Sbjct: 79  YLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYF 114


>ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|222857886|gb|EEE95433.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  150 bits (378), Expect = 3e-34
 Identities = 75/96 (78%), Positives = 82/96 (85%)
 Frame = -1

Query: 590 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITITRDKNKISVTSDNAFSXX 411
           FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD++T+TR+KNKI+VTSD+ FS  
Sbjct: 11  FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFSKR 70

Query: 410 XXXXXXXXXXXKHNVRDWLRVIASNKERNVYELRYF 303
                      KHNVRDWLRVIASNK+RNVYELRYF
Sbjct: 71  YLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYF 106


>gb|ABK94308.1| unknown [Populus trichocarpa]
          Length = 124

 Score =  150 bits (378), Expect = 3e-34
 Identities = 75/96 (78%), Positives = 82/96 (85%)
 Frame = -1

Query: 590 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITITRDKNKISVTSDNAFSXX 411
           FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD++T+TR+KNKI+VTSD+ FS  
Sbjct: 18  FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFSKR 77

Query: 410 XXXXXXXXXXXKHNVRDWLRVIASNKERNVYELRYF 303
                      KHNVRDWLRVIASNK+RNVYELRYF
Sbjct: 78  YLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYF 113


>gb|ABK92957.1| unknown [Populus trichocarpa]
          Length = 124

 Score =  150 bits (378), Expect = 3e-34
 Identities = 75/96 (78%), Positives = 82/96 (85%)
 Frame = -1

Query: 590 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITITRDKNKISVTSDNAFSXX 411
           FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGD++T+TR+KNKI+VTSD+ FS  
Sbjct: 18  FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTREKNKITVTSDSNFSKR 77

Query: 410 XXXXXXXXXXXKHNVRDWLRVIASNKERNVYELRYF 303
                      KHNVRDWLRVIASNK+RNVYELRYF
Sbjct: 78  YLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYF 113


>ref|XP_002516939.1| 60S ribosomal protein L22, putative [Ricinus communis]
           gi|223544027|gb|EEF45553.1| 60S ribosomal protein L22,
           putative [Ricinus communis]
          Length = 127

 Score =  149 bits (376), Expect = 5e-34
 Identities = 75/96 (78%), Positives = 82/96 (85%)
 Frame = -1

Query: 590 FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITITRDKNKISVTSDNAFSXX 411
           FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS+T+TR+K+KI+VTSD+ FS  
Sbjct: 21  FTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKR 80

Query: 410 XXXXXXXXXXXKHNVRDWLRVIASNKERNVYELRYF 303
                      KHNVRDWLRVIASNK+RNVYELRYF
Sbjct: 81  YLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYF 116


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