BLASTX nr result
ID: Coptis25_contig00001335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001335
(2125 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig... 941 0.0
emb|CBI38350.3| unnamed protein product [Vitis vinifera] 941 0.0
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera] 934 0.0
ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2... 912 0.0
ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein lig... 910 0.0
>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
vinifera]
Length = 652
Score = 941 bits (2432), Expect = 0.0
Identities = 432/536 (80%), Positives = 472/536 (88%), Gaps = 3/536 (0%)
Frame = +1
Query: 67 HRQQKNYTVLSEADIRQHQEEDITKVSTVLSISRVSASILLRHYNWSVSKVNDEWFANEE 246
HR Q+NYT+L+EADIRQ QE+DIT++STVLSI RVSASILLRHY WSVSKV+DEWFA+EE
Sbjct: 117 HRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEE 176
Query: 247 KVRMDVGLLEKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSIND 426
KVR VGLLEKP+V + NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I D
Sbjct: 177 KVRKAVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITD 236
Query: 427 GPGCLMLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDY 606
GPGCLMLRCPDP+CGAAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDY
Sbjct: 237 GPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDY 296
Query: 607 AVDFIFGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK 786
AVDFI GS SYDVSC C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK
Sbjct: 297 AVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK 356
Query: 787 PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGA 966
PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG
Sbjct: 357 PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGV 416
Query: 967 YDETERRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQ 1146
YDE E+RR+MAKNSLERYTHYYERWATNQSSRQKA+ADLQQMQ V+IEKLSDKQ PE+Q
Sbjct: 417 YDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQ 476
Query: 1147 LKFITDAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKD 1326
LKFIT+AWLQI+ECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+
Sbjct: 477 LKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKE 536
Query: 1327 LQVYLNAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXX 1506
LQ YL+A+GPS++FNEFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT
Sbjct: 537 LQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKS 596
Query: 1507 XXXXXXXXXXXXXXXXXXXXXXXQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 1665
+DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 597 LGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 652
>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 941 bits (2432), Expect = 0.0
Identities = 432/536 (80%), Positives = 472/536 (88%), Gaps = 3/536 (0%)
Frame = +1
Query: 67 HRQQKNYTVLSEADIRQHQEEDITKVSTVLSISRVSASILLRHYNWSVSKVNDEWFANEE 246
HR Q+NYT+L+EADIRQ QE+DIT++STVLSI RVSASILLRHY WSVSKV+DEWFA+EE
Sbjct: 46 HRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEE 105
Query: 247 KVRMDVGLLEKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSIND 426
KVR VGLLEKP+V + NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I D
Sbjct: 106 KVRKAVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITD 165
Query: 427 GPGCLMLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDY 606
GPGCLMLRCPDP+CGAAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDY
Sbjct: 166 GPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDY 225
Query: 607 AVDFIFGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK 786
AVDFI GS SYDVSC C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK
Sbjct: 226 AVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK 285
Query: 787 PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGA 966
PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG
Sbjct: 286 PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGV 345
Query: 967 YDETERRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQ 1146
YDE E+RR+MAKNSLERYTHYYERWATNQSSRQKA+ADLQQMQ V+IEKLSDKQ PE+Q
Sbjct: 346 YDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQ 405
Query: 1147 LKFITDAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKD 1326
LKFIT+AWLQI+ECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+
Sbjct: 406 LKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKE 465
Query: 1327 LQVYLNAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXX 1506
LQ YL+A+GPS++FNEFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT
Sbjct: 466 LQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKS 525
Query: 1507 XXXXXXXXXXXXXXXXXXXXXXXQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 1665
+DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 526 LGGGSSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 581
>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
Length = 588
Score = 934 bits (2415), Expect = 0.0
Identities = 429/532 (80%), Positives = 469/532 (88%), Gaps = 3/532 (0%)
Frame = +1
Query: 79 KNYTVLSEADIRQHQEEDITKVSTVLSISRVSASILLRHYNWSVSKVNDEWFANEEKVRM 258
+NYT+L+EADIRQ QE+DIT++STVLSI RVSASILLRHY WSVSKV+DEWFA+EEKVR
Sbjct: 57 QNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRK 116
Query: 259 DVGLLEKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSINDGPGC 438
VGLLEKP+V + NA+E TCGICFEN+PR R+ + ACGHPFC +CW GY ST+I DGPGC
Sbjct: 117 AVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGC 176
Query: 439 LMLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDYAVDF 618
LMLRCPDP+CGAAVGQDMIN L SDEDKEKY+RY LRSY+EDNRKTKWCPAPGCDYAVDF
Sbjct: 177 LMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDF 236
Query: 619 IFGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPK 798
I GS SYDVSC C+Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPK
Sbjct: 237 IVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPK 296
Query: 799 CKRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGAYDET 978
CKRPIEKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYETAKQEG YDE
Sbjct: 297 CKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEA 356
Query: 979 ERRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQLKFI 1158
E+RR+MAKNSLERYTHYYERWATNQSSRQKA+ADLQQMQ V+IEKLSDKQ PE+QLKFI
Sbjct: 357 EKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFI 416
Query: 1159 TDAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKDLQVY 1338
T+AWLQI+ECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQG+AESGLERLHQCAEK+LQ Y
Sbjct: 417 TEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTY 476
Query: 1339 LNAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXXXXXX 1518
L+A+GPS++FNEFRTKLAGLTSVT+NYFENLVRALENGLSDVDSRGACSRT
Sbjct: 477 LDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGG 536
Query: 1519 XXXXXXXXXXXXXXXXXXXQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 1665
+DSG WSCEHCT+AN +SATICQ+C Q+R
Sbjct: 537 SSKARGGRGKGTSSRSSSSSRNLDDSGHWSCEHCTFANVRSATICQICQQRR 588
>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
predicted protein [Populus trichocarpa]
Length = 591
Score = 912 bits (2356), Expect = 0.0
Identities = 417/536 (77%), Positives = 462/536 (86%), Gaps = 3/536 (0%)
Frame = +1
Query: 67 HRQQKNYTVLSEADIRQHQEEDITKVSTVLSISRVSASILLRHYNWSVSKVNDEWFANEE 246
HR Q+NYTVLSE DIRQ Q++D+ +++TVLSIS+V+ASILLR+YNWSVSKV+DEWFA+EE
Sbjct: 56 HRHQQNYTVLSEEDIRQRQDDDVMRIATVLSISKVAASILLRYYNWSVSKVHDEWFADEE 115
Query: 247 KVRMDVGLLEKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSIND 426
KVR VGLLE+P+V + + +E TCGICFE +P R+ A ACGHPFC+SCW GYIST+IND
Sbjct: 116 KVRKAVGLLEEPVVPFPDGREMTCGICFETYPSDRLLAAACGHPFCNSCWAGYISTAIND 175
Query: 427 GPGCLMLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDY 606
GPGCLMLRCPDPSC AA+GQDMIN L SDED EK++RY +RSY+EDNRKTKWCPAPGCDY
Sbjct: 176 GPGCLMLRCPDPSCNAAIGQDMINLLTSDEDSEKHSRYFIRSYIEDNRKTKWCPAPGCDY 235
Query: 607 AVDFIFGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK 786
AVDFI GS SYDV+C C Y FCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK
Sbjct: 236 AVDFIVGSGSYDVTCRCAYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK 295
Query: 787 PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGA 966
PCPKCKRPIEKNQGCMHITCTPPCKFEFC LCLG+WSDHGERTGGFYACNRYETAKQEG
Sbjct: 296 PCPKCKRPIEKNQGCMHITCTPPCKFEFCRLCLGAWSDHGERTGGFYACNRYETAKQEGV 355
Query: 967 YDETERRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQ 1146
YDE+E+RREMAKNSLERYTHYYERWATNQSSRQKA+ADLQQMQ VH+EKLSD Q PE+Q
Sbjct: 356 YDESEKRREMAKNSLERYTHYYERWATNQSSRQKALADLQQMQNVHLEKLSDIQCQPESQ 415
Query: 1147 LKFITDAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKD 1326
LKFI +AWLQI+ECRRVLKWTYAYGYYLPEHEHAKR FFEY+QG+AESGLERLHQCAEK+
Sbjct: 416 LKFIIEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRMFFEYVQGEAESGLERLHQCAEKE 475
Query: 1327 LQVYLNAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXX 1506
LQ+YLNAEGPS++FNEFRTKLAGLTSVT+NYFENLVRALENGLSDVDS G CSRT
Sbjct: 476 LQIYLNAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGTCSRTASSKS 535
Query: 1507 XXXXXXXXXXXXXXXXXXXXXXXQ---EDSGSWSCEHCTYANAKSATICQMCNQQR 1665
+D G WSCEHCT+AN K ATIC MC Q+R
Sbjct: 536 LGGGSSRARAGRGKGSTSRSSGPSRNIDDPGHWSCEHCTFANIKPATICAMCQQRR 591
>ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Vitis
vinifera] gi|147800085|emb|CAN64272.1| hypothetical
protein VITISV_008933 [Vitis vinifera]
Length = 587
Score = 910 bits (2353), Expect = 0.0
Identities = 420/535 (78%), Positives = 460/535 (85%), Gaps = 2/535 (0%)
Frame = +1
Query: 67 HRQQKNYTVLSEADIRQHQEEDITKVSTVLSISRVSASILLRHYNWSVSKVNDEWFANEE 246
HR Q NYT+L E DI QHQE+DI +V+ VLSI+ VSASILLRHY+WSVSKVNDEWFA+E
Sbjct: 52 HRHQPNYTILKEEDIHQHQEDDIARVAAVLSIASVSASILLRHYHWSVSKVNDEWFADES 111
Query: 247 KVRMDVGLLEKPIVIYSNAKEWTCGICFENFPRSRMKATACGHPFCSSCWKGYISTSIND 426
+VR VGLLE+P+V Y NAKE TCGICFE +PR +++ ACGHPFCS+CW+GYISTSIND
Sbjct: 112 RVRKAVGLLEEPLVRYPNAKELTCGICFETYPRDMIQSAACGHPFCSTCWEGYISTSIND 171
Query: 427 GPGCLMLRCPDPSCGAAVGQDMINALVSDEDKEKYNRYLLRSYVEDNRKTKWCPAPGCDY 606
GPGCLMLRCPDPSC AAVGQDMIN L SDED EKY+RYLLRSY+EDNRKTKWCPAPGC+Y
Sbjct: 172 GPGCLMLRCPDPSCRAAVGQDMINLLASDEDNEKYSRYLLRSYIEDNRKTKWCPAPGCEY 231
Query: 607 AVDFIFGSASYDVSCNCTYGFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSK 786
AV+F+ GS SYDV+C C+YGFCWNCTEEAHRPVDC TVAKWILKNSAESENMNWILANSK
Sbjct: 232 AVEFVAGSGSYDVACQCSYGFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSK 291
Query: 787 PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGSWSDHGERTGGFYACNRYETAKQEGA 966
PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLG+WSDHGERTGGFYACNRYE AKQEG
Sbjct: 292 PCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGV 351
Query: 967 YDETERRREMAKNSLERYTHYYERWATNQSSRQKAMADLQQMQAVHIEKLSDKQSTPETQ 1146
YDETERRREMAKNSLERYTHYYERWATNQSSRQKA+ADL QMQ V+IEKLSDKQ PE+Q
Sbjct: 352 YDETERRREMAKNSLERYTHYYERWATNQSSRQKALADLHQMQNVNIEKLSDKQCQPESQ 411
Query: 1147 LKFITDAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGDAESGLERLHQCAEKD 1326
LKFIT+AWLQI+ECRRVLKWTYAYGYYLPEHE +RQFFEYLQG+AESGLERLHQCAEK+
Sbjct: 412 LKFITEAWLQIVECRRVLKWTYAYGYYLPEHELPRRQFFEYLQGEAESGLERLHQCAEKE 471
Query: 1327 LQVYLNAEGPSQEFNEFRTKLAGLTSVTKNYFENLVRALENGLSDVDSRGACSRTXXXXX 1506
LQ YLN +GPS +FN+FRTKLAGLTSVT+NYFENLVRALENGLSDVDS GACSRT
Sbjct: 472 LQTYLNVDGPSADFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSYGACSRTTSSKS 531
Query: 1507 XXXXXXXXXXXXXXXXXXXXXXXQ--EDSGSWSCEHCTYANAKSATICQMCNQQR 1665
+ +DS W CEHC ANAKSA CQMC+Q+R
Sbjct: 532 MGGTSKARGGRGKGTTSRSSSSNKTPDDSSRWYCEHCATANAKSAYTCQMCHQRR 586