BLASTX nr result

ID: Coptis25_contig00001324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001324
         (1453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512121.1| DNA binding protein, putative [Ricinus commu...   422   e-115
ref|XP_002274826.1| PREDICTED: uncharacterized protein LOC100266...   415   e-113
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]   413   e-113
ref|XP_003518753.1| PREDICTED: uncharacterized protein LOC100794...   408   e-111
ref|XP_003516316.1| PREDICTED: uncharacterized protein LOC100783...   397   e-108

>ref|XP_002512121.1| DNA binding protein, putative [Ricinus communis]
            gi|223549301|gb|EEF50790.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 336

 Score =  422 bits (1085), Expect = e-115
 Identities = 206/287 (71%), Positives = 238/287 (82%)
 Frame = -2

Query: 1200 HQNVMGLYMTSHGNRLKQRDAKVQAGWLFNKGGDRGMDASAEKSESANEDIVVFFFQLDL 1021
            HQ V  LY   + N  + R+ +V+AGWLFN+GG++  +AS E+SESANEDI++FFFQLDL
Sbjct: 45   HQLVQSLYFMGNPNLSRHRNLRVEAGWLFNRGGNQESEASCERSESANEDILIFFFQLDL 104

Query: 1020 ATRVQCALNMEEYDIAQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISILRLRTDM 841
            ATRVQ ALN E+YDIAQQLRNKL EVEAEVIRQQ+ KRGS++KSEAQDKA+SI+RLR D+
Sbjct: 105  ATRVQYALNTEQYDIAQQLRNKLTEVEAEVIRQQEAKRGSSSKSEAQDKALSIIRLRADL 164

Query: 840  QKAIENENYALAAELRDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVFGYRAVV 661
            Q AIENENYA+AA+LRD+I+              AYEN QYAFRLGQKV HK FGY+AVV
Sbjct: 165  QNAIENENYAMAAQLRDQISKLEAESLAASVNALAYENAQYAFRLGQKVTHKTFGYQAVV 224

Query: 660  CGMDPVCCESSSWMESAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLLTPDQPD 481
            CGMDPVCCESSSWME+AQV+KL+RGSNQPFYQ LVDV+AD NLLV YV EENL+ P+QPD
Sbjct: 225  CGMDPVCCESSSWMETAQVEKLSRGSNQPFYQVLVDVHADPNLLVAYVAEENLVAPEQPD 284

Query: 480  KERFDHPYTSFLFYGMDTAGDFIPIKQLREKYSKPRHEVPADSQDED 340
              RFDHPY SFLFYG DTAGDFIPIKQLREKY++PRHEVP D  DED
Sbjct: 285  LGRFDHPYVSFLFYGTDTAGDFIPIKQLREKYNRPRHEVPFDPPDED 331


>ref|XP_002274826.1| PREDICTED: uncharacterized protein LOC100266199 [Vitis vinifera]
            gi|297738051|emb|CBI27252.3| unnamed protein product
            [Vitis vinifera]
          Length = 340

 Score =  415 bits (1067), Expect = e-113
 Identities = 205/298 (68%), Positives = 237/298 (79%), Gaps = 2/298 (0%)
 Frame = -2

Query: 1218 EGHCLWHQNVMGLYMTSHGNRLKQRDAKVQAGWLFNKGGDRGMDASAEKSESANEDIVVF 1039
            E + LWH     L+        +QR+ +V+AGWLF  GGD+G+DAS+E SESANEDI++F
Sbjct: 42   ERNFLWHHCAQRLFFAGQLVMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIF 101

Query: 1038 FFQLDLATRVQCALNMEEYDIAQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISIL 859
            FFQLDLATRVQ ALN E+Y+IAQQLR+KL EVEAEV++Q++ KRGST+KSEAQDKA+S++
Sbjct: 102  FFQLDLATRVQYALNTEQYEIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMI 161

Query: 858  RLRTDMQKAIENENYALAAELRDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVF 679
            RLR D+QKAIE ENYALAAELRD+I                YEN  YAFRLGQKVRHKVF
Sbjct: 162  RLRADLQKAIEAENYALAAELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVF 221

Query: 678  GYRAVVCGMDPVCCESSSWMESAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLL 499
            GY AV+CGMDPVCCESSSW ESA VDKLTRGSNQPFYQ LVDV+ D NLLV YVPEENLL
Sbjct: 222  GYSAVICGMDPVCCESSSWRESAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLL 281

Query: 498  TPD--QPDKERFDHPYTSFLFYGMDTAGDFIPIKQLREKYSKPRHEVPADSQDEDGKE 331
             PD  +P+K RFDHPY SFLFYGMD AGDFIPIKQLREKY++PRHEVP D   E G++
Sbjct: 282  VPDGPRPNKGRFDHPYLSFLFYGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGEGGED 339


>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  413 bits (1062), Expect = e-113
 Identities = 206/300 (68%), Positives = 236/300 (78%), Gaps = 2/300 (0%)
 Frame = -2

Query: 1218 EGHCLWHQNVMGLYMTSHGNRLKQRDAKVQAGWLFNKGGDRGMDASAEKSESANEDIVVF 1039
            E + LWH     L+        +QR+ +V+AGWLF  GGD+G+DAS+E SESANEDI++F
Sbjct: 42   ERNFLWHHCAQRLFFAGQLVMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIF 101

Query: 1038 FFQLDLATRVQCALNMEEYDIAQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISIL 859
            FFQLDLATRVQ ALN E+Y+IAQQLR+KL EVEAEV++Q++ KRGST+KSEAQDKA+S++
Sbjct: 102  FFQLDLATRVQYALNTEQYEIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMI 161

Query: 858  RLRTDMQKAIENENYALAAELRDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVF 679
            RLR D+QKAIE ENYALAAELRD+I                YEN  YAFRLGQKVRHKVF
Sbjct: 162  RLRADLQKAIEAENYALAAELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVF 221

Query: 678  GYRAVVCGMDPVCCESSSWMESAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLL 499
            GY AV+CGMDPVCCESSSW ESA VDKLTRGSNQPFYQ LVDV+ D NLLV YVPEENLL
Sbjct: 222  GYSAVICGMDPVCCESSSWRESAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLL 281

Query: 498  TPD--QPDKERFDHPYTSFLFYGMDTAGDFIPIKQLREKYSKPRHEVPADSQDEDGKEGA 325
             PD  +P+K RFDHPY SFLFYGMD AGDFIPIKQLREKY++PRHEVP D   E   E A
Sbjct: 282  VPDGPRPNKGRFDHPYLSFLFYGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGEASAEYA 341


>ref|XP_003518753.1| PREDICTED: uncharacterized protein LOC100794023 [Glycine max]
          Length = 327

 Score =  408 bits (1049), Expect = e-111
 Identities = 201/291 (69%), Positives = 241/291 (82%)
 Frame = -2

Query: 1212 HCLWHQNVMGLYMTSHGNRLKQRDAKVQAGWLFNKGGDRGMDASAEKSESANEDIVVFFF 1033
            H +W+ +V  L++T H       D + +A W+F +GG++G+DAS+E SESANEDI++FFF
Sbjct: 44   HLVWNNSVQSLFLTRHS------DFRAEAAWMF-RGGEQGLDASSEHSESANEDILMFFF 96

Query: 1032 QLDLATRVQCALNMEEYDIAQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQDKAISILRL 853
            QLDLATRVQ ALNME+YDIA+QLRNKLAEVE EVI+QQ +KRG ++K EAQDKAISI+RL
Sbjct: 97   QLDLATRVQYALNMEQYDIAKQLRNKLAEVEEEVIKQQQSKRGLSSKGEAQDKAISIIRL 156

Query: 852  RTDMQKAIENENYALAAELRDKITXXXXXXXXXXXXXXAYENVQYAFRLGQKVRHKVFGY 673
            R+D+QKAIENE+YALAAELRD+I+              A+EN QYAFRLGQKVRHK FGY
Sbjct: 157  RSDLQKAIENEDYALAAELRDEISKLEAESLAASATALAHENAQYAFRLGQKVRHKKFGY 216

Query: 672  RAVVCGMDPVCCESSSWMESAQVDKLTRGSNQPFYQALVDVYADSNLLVTYVPEENLLTP 493
            RAV+CGMDPVC ESSSWME+AQV KL+RGS QPFYQ LVDV+A+ NLLV YVPEENLLTP
Sbjct: 217  RAVICGMDPVCSESSSWMENAQVKKLSRGSAQPFYQVLVDVHAEPNLLVAYVPEENLLTP 276

Query: 492  DQPDKERFDHPYTSFLFYGMDTAGDFIPIKQLREKYSKPRHEVPADSQDED 340
            D+PD  RFDHPY SFLFYGMD+AGDFIPIKQLREKY+KPRHE+P D  +++
Sbjct: 277  DKPDTGRFDHPYISFLFYGMDSAGDFIPIKQLREKYNKPRHEIPIDPPNDE 327


>ref|XP_003516316.1| PREDICTED: uncharacterized protein LOC100783767 [Glycine max]
          Length = 303

 Score =  397 bits (1019), Expect = e-108
 Identities = 198/299 (66%), Positives = 242/299 (80%), Gaps = 1/299 (0%)
 Frame = -2

Query: 1233 VSSCLEGHCLWHQNVMGLYMTSHGNRLKQRDAKVQAGWLFNKGGDRGMDASAEKSESANE 1054
            ++S    + +W+ +V  L++T H         + +A W+F +GG++G+D S+E SESANE
Sbjct: 12   ITSSTGRNLVWNNSVQSLFLTRHSG------FRAEAAWMF-RGGEQGLDVSSEHSESANE 64

Query: 1053 DIVVFFF-QLDLATRVQCALNMEEYDIAQQLRNKLAEVEAEVIRQQDTKRGSTAKSEAQD 877
            DI++FFF QLDLATRVQ ALNME+YDIA+QLRNKLAEVE EVI+QQ +KRG ++KSEAQD
Sbjct: 65   DILMFFFFQLDLATRVQYALNMEQYDIAKQLRNKLAEVEEEVIKQQQSKRGLSSKSEAQD 124

Query: 876  KAISILRLRTDMQKAIENENYALAAELRDKITXXXXXXXXXXXXXXAYENVQYAFRLGQK 697
            KAISI+RL +D+Q AIENE+YALAAELRD+I+              A+EN QYAFRLGQK
Sbjct: 125  KAISIIRLHSDLQNAIENEHYALAAELRDEISKLEAESLAASAKALAHENAQYAFRLGQK 184

Query: 696  VRHKVFGYRAVVCGMDPVCCESSSWMESAQVDKLTRGSNQPFYQALVDVYADSNLLVTYV 517
            VRHK FGY+AV+CGMDPVC ESSSWME+AQV KL+RGS QPFYQ LVDV+A+ NLLV YV
Sbjct: 185  VRHKKFGYKAVICGMDPVCSESSSWMENAQVKKLSRGSAQPFYQVLVDVHAEPNLLVAYV 244

Query: 516  PEENLLTPDQPDKERFDHPYTSFLFYGMDTAGDFIPIKQLREKYSKPRHEVPADSQDED 340
            PEENLLTPD+PDK RFDHPY SFLFYGMD+AGDFIPIKQLREKY+KPRHE+P D  +++
Sbjct: 245  PEENLLTPDKPDKGRFDHPYISFLFYGMDSAGDFIPIKQLREKYNKPRHEIPIDPPNDE 303


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