BLASTX nr result

ID: Coptis25_contig00001301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001301
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304013.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002336701.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
gb|ABK93789.1| unknown [Populus trichocarpa]                           75   6e-12
ref|XP_002313728.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12

>ref|XP_002304013.1| predicted protein [Populus trichocarpa] gi|222841445|gb|EEE78992.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = -3

Query: 299 GRNGALQSPRELPIVGGTGLFRFARGVAIANTYNFNSTTGDAVVEYNVTAIHY 141
           GRN      RE+P++GG+GLFRFARG A ANTY+FN+ TGDAVVEYNV  +HY
Sbjct: 141 GRNHVFSKVREMPVIGGSGLFRFARGYAQANTYSFNAKTGDAVVEYNVYVLHY 193


>ref|XP_002336701.1| predicted protein [Populus trichocarpa] gi|222836553|gb|EEE74960.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = -3

Query: 299 GRNGALQSPRELPIVGGTGLFRFARGVAIANTYNFNSTTGDAVVEYNVTAIHY 141
           GRN      RE+P++GG+GLFRFARG A ANTY+FN+ TGDAVVEYNV  +HY
Sbjct: 143 GRNHVFSKVREMPVIGGSGLFRFARGYAQANTYSFNAKTGDAVVEYNVYVLHY 195


>ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|222867969|gb|EEF05100.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = -3

Query: 299 GRNGALQSPRELPIVGGTGLFRFARGVAIANTYNFNSTTGDAVVEYNVTAIHY 141
           GRN    + RE+PIVGG+GLFRFARG A A+T+ F+ TTGDAVVEYNV   HY
Sbjct: 126 GRNSVFSTVREMPIVGGSGLFRFARGYAQASTHMFDRTTGDAVVEYNVYVFHY 178


>gb|ABK93789.1| unknown [Populus trichocarpa]
          Length = 194

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = -3

Query: 299 GRNGALQSPRELPIVGGTGLFRFARGVAIANTYNFNSTTGDAVVEYNVTAIHY 141
           GRN    + RE+PIVGG+GLFRFARG A A+T+ F+ TTGDAVVEYNV   HY
Sbjct: 142 GRNSVFSTVREMPIVGGSGLFRFARGYAQASTHMFDRTTGDAVVEYNVYVFHY 194


>ref|XP_002313728.1| predicted protein [Populus trichocarpa] gi|222850136|gb|EEE87683.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/52 (65%), Positives = 41/52 (78%)
 Frame = -3

Query: 299 GRNGALQSPRELPIVGGTGLFRFARGVAIANTYNFNSTTGDAVVEYNVTAIH 144
           G+N A+   RE+PIVGGTGLFRFARG A+A TY  + TTGDA+V YNVT +H
Sbjct: 133 GKNPAMNPVREMPIVGGTGLFRFARGYAVAQTYWLDLTTGDAIVGYNVTVVH 184


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