BLASTX nr result

ID: Coptis25_contig00001297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001297
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Gl...   306   1e-81
gb|ACU13388.1| unknown [Glycine max]                                  306   1e-81
emb|CAA98166.1| RAB5A [Lotus japonicus] gi|388504250|gb|AFK40191...   306   1e-81
emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichori...   306   2e-81
ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycin...   305   4e-81

>ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
          Length = 200

 Score =  306 bits (784), Expect = 1e-81
 Identities = 153/164 (93%), Positives = 161/164 (98%)
 Frame = -1

Query: 492 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 313
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 312 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 133
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS++SFTRAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120

Query: 132 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVF 1
           AGNKADLE+KRKVTAEEAR+YAEENGLFFMETSAK A+NVND+F
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIF 164


>gb|ACU13388.1| unknown [Glycine max]
          Length = 204

 Score =  306 bits (784), Expect = 1e-81
 Identities = 153/164 (93%), Positives = 161/164 (98%)
 Frame = -1

Query: 492 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 313
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 312 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 133
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS++SFTRAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120

Query: 132 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVF 1
           AGNKADLE+KRKVTAEEAR+YAEENGLFFMETSAK A+NVND+F
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIF 164


>emb|CAA98166.1| RAB5A [Lotus japonicus] gi|388504250|gb|AFK40191.1| unknown [Lotus
           japonicus]
          Length = 200

 Score =  306 bits (784), Expect = 1e-81
 Identities = 153/164 (93%), Positives = 161/164 (98%)
 Frame = -1

Query: 492 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 313
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 312 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 133
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS++SFTRAKKWVQELQKQGNP+MVMAF
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAF 120

Query: 132 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVF 1
           AGNK+DLE+KRKVTA+EAR+YAEENGLFFMETSAK A NVNDVF
Sbjct: 121 AGNKSDLEDKRKVTADEARVYAEENGLFFMETSAKTAANVNDVF 164


>emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
          Length = 200

 Score =  306 bits (783), Expect = 2e-81
 Identities = 154/164 (93%), Positives = 159/164 (96%)
 Frame = -1

Query: 492 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 313
           MAT G+NNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 312 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 133
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS +SFTRAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120

Query: 132 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVF 1
           AGNKADLE+KRKVTAEEAR+YAEENGLFFMETSAK A NVNDVF
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVF 164


>ref|NP_001242153.1| uncharacterized protein LOC100791620 [Glycine max]
           gi|255642884|gb|ACU22609.1| unknown [Glycine max]
          Length = 200

 Score =  305 bits (780), Expect = 4e-81
 Identities = 152/164 (92%), Positives = 160/164 (97%)
 Frame = -1

Query: 492 MATTGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 313
           MAT G+NNLNAKLVLLGDMGAGKS LVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATIGHNNLNAKLVLLGDMGAGKSGLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60

Query: 312 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFTRAKKWVQELQKQGNPSMVMAF 133
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS++SFTRAKKWVQELQKQGNP+MVMA 
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120

Query: 132 AGNKADLEEKRKVTAEEARLYAEENGLFFMETSAKNATNVNDVF 1
           AGNKADLE+KRKVTAEEAR+YAEENGLFFMETSAK A+NVND+F
Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTASNVNDIF 164


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