BLASTX nr result

ID: Coptis25_contig00001281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001281
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|2...   222   2e-56
gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]    220   1e-55
emb|CBI26389.3| unnamed protein product [Vitis vinifera]              210   9e-53
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...   207   7e-52
ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|2...   206   1e-51

>ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1|
           predicted protein [Populus trichocarpa]
          Length = 723

 Score =  222 bits (566), Expect = 2e-56
 Identities = 102/147 (69%), Positives = 121/147 (82%)
 Frame = +3

Query: 3   VIRDEDMAKVKENKANMPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILALD 182
           VI DE        +A MPLL+YVSREKR +H HHFKAGALN LLRVSG+++NSPYIL LD
Sbjct: 232 VINDEPKNVAAIRQAKMPLLVYVSREKRPSHSHHFKAGALNVLLRVSGIMTNSPYILVLD 291

Query: 183 CDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGFEVMWYGV 362
           CDMYC+DPT+ARQAMCFH+DP ISPSLAF+QFPQKFHN++KNDIY+  LRK F + W G+
Sbjct: 292 CDMYCNDPTSARQAMCFHLDPKISPSLAFIQFPQKFHNINKNDIYDGQLRKLFVIRWPGI 351

Query: 363 DGINGPYLSGTGFYMKREAFYRSPTQK 443
           DG+ GP LSGTGFYMKREA Y + ++K
Sbjct: 352 DGLQGPILSGTGFYMKREALYGNLSEK 378


>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score =  220 bits (560), Expect = 1e-55
 Identities = 102/147 (69%), Positives = 121/147 (82%)
 Frame = +3

Query: 3   VIRDEDMAKVKENKANMPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILALD 182
           VI D    +    +A MPLL+YVSREKR +H HHFKAGALN LLRVSG+I+NSPYIL LD
Sbjct: 232 VIDDGPENEAGIRQAKMPLLVYVSREKRPSHSHHFKAGALNVLLRVSGIITNSPYILVLD 291

Query: 183 CDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGFEVMWYGV 362
           CDMYC+DPT+ARQAMCFH+DP ISPSLAF+QFPQKFHN++KNDIY+  LRK F + W G+
Sbjct: 292 CDMYCNDPTSARQAMCFHLDPAISPSLAFIQFPQKFHNINKNDIYDGQLRKIFVIRWPGI 351

Query: 363 DGINGPYLSGTGFYMKREAFYRSPTQK 443
           DG+ GP LSGTGFYMKREA Y + ++K
Sbjct: 352 DGLQGPVLSGTGFYMKREALYGNLSEK 378


>emb|CBI26389.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  210 bits (535), Expect = 9e-53
 Identities = 99/152 (65%), Positives = 120/152 (78%), Gaps = 10/152 (6%)
 Frame = +3

Query: 6   IRDEDMAKVKENKAN----------MPLLIYVSREKRSTHPHHFKAGALNALLRVSGVIS 155
           IR+E M+   ++ A           MPLL+YVSREKR +HPHHFKAGALN LLRVSG+IS
Sbjct: 272 IRNESMSSPTDHPAGVEVIGADQVEMPLLVYVSREKRPSHPHHFKAGALNVLLRVSGIIS 331

Query: 156 NSPYILALDCDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRK 335
           NSPYIL LDCDMYC+DPT+A++AMCFH+DP ISP+LAFVQFPQ+FHN+SKNDIY+  LR 
Sbjct: 332 NSPYILILDCDMYCNDPTSAQKAMCFHLDPKISPTLAFVQFPQRFHNISKNDIYDSGLRS 391

Query: 336 GFEVMWYGVDGINGPYLSGTGFYMKREAFYRS 431
            F ++W G DG+ GP L+GT FY+KR AFY S
Sbjct: 392 IFSILWEGFDGLQGPVLAGTCFYIKRVAFYGS 423


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 733

 Score =  207 bits (527), Expect = 7e-52
 Identities = 92/133 (69%), Positives = 110/133 (82%)
 Frame = +3

Query: 42  KANMPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILALDCDMYCSDPTTARQ 221
           +A MP+L+YVSREKR +HPHHFKAGALN LLRVS +ISNSPYIL LDCDMYC+DP + RQ
Sbjct: 242 EAEMPILVYVSREKRPSHPHHFKAGALNVLLRVSSMISNSPYILVLDCDMYCNDPASVRQ 301

Query: 222 AMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGFEVMWYGVDGINGPYLSGTGF 401
           AMC H+DP +SPSLAFVQFPQ+FHN+S NDIY+  +R  F  +W G+DG++GP LSGTGF
Sbjct: 302 AMCCHLDPILSPSLAFVQFPQRFHNISSNDIYDSQMRSAFSTLWEGMDGLDGPVLSGTGF 361

Query: 402 YMKREAFYRSPTQ 440
           YMKR A Y +  Q
Sbjct: 362 YMKRVALYGTSIQ 374


>ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1|
           predicted protein [Populus trichocarpa]
          Length = 857

 Score =  206 bits (525), Expect = 1e-51
 Identities = 100/161 (62%), Positives = 122/161 (75%), Gaps = 14/161 (8%)
 Frame = +3

Query: 3   VIRDEDMAKVKENKAN-MPLLIYVSREKRSTHPHHFKAGALNALLRVSGVISNSPYILAL 179
           VI+D    +  +++AN MPLL+YVSREKR +HPHHFKAGALN LLRVSGVISNSP+IL L
Sbjct: 317 VIQDNSNEEAPKDEANEMPLLVYVSREKRPSHPHHFKAGALNVLLRVSGVISNSPHILVL 376

Query: 180 DCDMYCSDPTTARQAMCFHMDPHISPSLAFVQFPQKFHNVSKNDIYNDLLRKGF------ 341
           DCDMYC+DPT+ARQAMCF  DP+IS SLAFVQFPQ+FHN+SK+DIY+  LR  F      
Sbjct: 377 DCDMYCNDPTSARQAMCFFFDPNISSSLAFVQFPQRFHNISKHDIYDSQLRSTFGVRLVF 436

Query: 342 -------EVMWYGVDGINGPYLSGTGFYMKREAFYRSPTQK 443
                  +++W G+DG+ GP LSGTGFY+KR + Y    QK
Sbjct: 437 IDFTLLNQILWQGLDGLKGPVLSGTGFYIKRNSLYGDSMQK 477


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