BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001233
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [S...    82   5e-14
ref|XP_002319083.1| histone H1 [Populus trichocarpa] gi|22285745...    82   5e-14
ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] g...    81   8e-14
ref|XP_002879272.1| hypothetical protein ARALYDRAFT_481979 [Arab...    81   1e-13
ref|NP_180620.1| histone H1.2 [Arabidopsis thaliana] gi|121907|s...    80   2e-13

>ref|XP_002466284.1| hypothetical protein SORBIDRAFT_01g005010 [Sorghum bicolor]
           gi|241920138|gb|EER93282.1| hypothetical protein
           SORBIDRAFT_01g005010 [Sorghum bicolor]
          Length = 281

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = +3

Query: 3   DAIVSLKERTGSSQYAISKFLEDKHKDKLPPNFXXXXXXXXXXXXASEKLVKVKGSFKLP 182
           +AI SLKERTGSSQYAI+KF+EDKHKDKLPPNF            A+ KL KVK S+KLP
Sbjct: 59  EAITSLKERTGSSQYAIAKFVEDKHKDKLPPNFRKLLLVQLKKLVAAGKLTKVKNSYKLP 118

Query: 183 SVRSSSSS 206
           + R+ +++
Sbjct: 119 AARAPAAT 126


>ref|XP_002319083.1| histone H1 [Populus trichocarpa] gi|222857459|gb|EEE95006.1|
           histone H1 [Populus trichocarpa]
          Length = 190

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = +3

Query: 3   DAIVSLKERTGSSQYAISKFLEDKHKDKLPPNFXXXXXXXXXXXXASEKLVKVKGSFKLP 182
           DAI++LKERTGSSQYAI+KFLE+KHK KLP NF            AS+KLVKVK SFKLP
Sbjct: 25  DAILTLKERTGSSQYAITKFLEEKHKKKLPANFRKLLLVQLKKLVASQKLVKVKNSFKLP 84

Query: 183 SVR 191
           S R
Sbjct: 85  SAR 87


>ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis]
           gi|223529105|gb|EEF31085.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 232

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/65 (67%), Positives = 49/65 (75%)
 Frame = +3

Query: 3   DAIVSLKERTGSSQYAISKFLEDKHKDKLPPNFXXXXXXXXXXXXASEKLVKVKGSFKLP 182
           DAIV+LKERTGSSQYAI+KF+E+KHK KLPPNF            AS KLVKVK SFKLP
Sbjct: 61  DAIVTLKERTGSSQYAITKFVEEKHK-KLPPNFRKLLLFHLKKLVASGKLVKVKNSFKLP 119

Query: 183 SVRSS 197
           S RS+
Sbjct: 120 SARSA 124


>ref|XP_002879272.1| hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp.
           lyrata] gi|297325111|gb|EFH55531.1| hypothetical protein
           ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/67 (62%), Positives = 50/67 (74%)
 Frame = +3

Query: 3   DAIVSLKERTGSSQYAISKFLEDKHKDKLPPNFXXXXXXXXXXXXASEKLVKVKGSFKLP 182
           DAIV+LKERTGSSQYAI KF+E+KHK  LPPNF            ASEKLVKVK SFK+P
Sbjct: 67  DAIVTLKERTGSSQYAIQKFIEEKHK-SLPPNFRKILLVNLKRLVASEKLVKVKASFKIP 125

Query: 183 SVRSSSS 203
           S +S+++
Sbjct: 126 SAKSATT 132


>ref|NP_180620.1| histone H1.2 [Arabidopsis thaliana] gi|121907|sp|P26569.1|H12_ARATH
           RecName: Full=Histone H1.2
           gi|13430598|gb|AAK25921.1|AF360211_1 putative histone H1
           protein [Arabidopsis thaliana] gi|16320|emb|CAA44316.1|
           Histone H1-2 [Arabidopsis thaliana]
           gi|14532870|gb|AAK64117.1| putative histone H1 protein
           [Arabidopsis thaliana] gi|20198329|gb|AAM15525.1|
           histone H1 [Arabidopsis thaliana]
           gi|21553923|gb|AAM63006.1| histone H1 [Arabidopsis
           thaliana] gi|330253325|gb|AEC08419.1| histone H1.2
           [Arabidopsis thaliana]
          Length = 273

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = +3

Query: 3   DAIVSLKERTGSSQYAISKFLEDKHKDKLPPNFXXXXXXXXXXXXASEKLVKVKGSFKLP 182
           DAIV+LKERTGSSQYAI KF+E+KHK  LPP F            ASEKLVKVK SFK+P
Sbjct: 71  DAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVKASFKIP 129

Query: 183 SVRSSSS 203
           S RS+++
Sbjct: 130 SARSAAT 136