BLASTX nr result

ID: Coptis25_contig00001228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001228
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2...   312   8e-83
ref|XP_004160430.1| PREDICTED: peroxisome biogenesis protein 3-2...   308   1e-81
ref|XP_004137328.1| PREDICTED: peroxisome biogenesis protein 3-2...   307   3e-81
ref|XP_002317886.1| predicted protein [Populus trichocarpa] gi|2...   295   1e-77
ref|XP_002322084.1| predicted protein [Populus trichocarpa] gi|2...   285   2e-74

>ref|XP_002281306.1| PREDICTED: peroxisome biogenesis protein 3-2 [Vitis vinifera]
            gi|297734292|emb|CBI15539.3| unnamed protein product
            [Vitis vinifera]
          Length = 373

 Score =  312 bits (800), Expect = 8e-83
 Identities = 166/270 (61%), Positives = 209/270 (77%), Gaps = 2/270 (0%)
 Frame = -2

Query: 1050 TLTSLEKIEIWENLKILNFTRLAVSLWAMTVLNLYIRVQVNILGRHLYLDTARGMGASYL 871
            TLT  EK+E+W+ LKIL+FTR+ +SLWAMT+L+LYIRVQVNILGRHLY+DTARG G+S+L
Sbjct: 109  TLTPSEKLELWDRLKILSFTRMVLSLWAMTMLSLYIRVQVNILGRHLYIDTARGGGSSHL 168

Query: 870  LEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAVTEVLKGKQLRDLFNTTLLQ 691
            LEE D  DRH    QQ FLA+AD+LS Y +  LI NM  A  EVLKGKQLRD+FN+ +L 
Sbjct: 169  LEEADPIDRH---DQQKFLASADFLSNYSIPALISNMHAAAAEVLKGKQLRDVFNSMVLH 225

Query: 690  ETALQILKTFMNVGDLHHWMSYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGE 511
             T +QIL  F++ G  H+ + YL+P+D  SY+ +    S S+ D+S    V K DQL+ E
Sbjct: 226  GTIMQILDLFISTGKPHNLVDYLMPDDTKSYKPA----SPSNGDSSTPADVTKFDQLMVE 281

Query: 510  ARAVLLSAEFGNVMEVSLRSVVDALMKD-VGLQ-SGGNPSSGVPLAKLLPRIAQMGPLLL 337
             RAVL SAEF NV++VSLR+VVDA+++D +G+Q  GG+PSSG+ LAKLLPR+AQMGPLLL
Sbjct: 282  TRAVLSSAEFINVIDVSLRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLL 341

Query: 336  EEPSNNQFIRIIQSLPEVELFYTLLYANTP 247
            EEPS N+FI+IIQ  PEVE F+TLLYAN P
Sbjct: 342  EEPSKNRFIQIIQKAPEVEFFFTLLYANMP 371


>ref|XP_004160430.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Cucumis sativus]
          Length = 373

 Score =  308 bits (790), Expect = 1e-81
 Identities = 157/270 (58%), Positives = 207/270 (76%), Gaps = 2/270 (0%)
 Frame = -2

Query: 1050 TLTSLEKIEIWENLKILNFTRLAVSLWAMTVLNLYIRVQVNILGRHLYLDTARGMGASYL 871
            TLT  EK+++WENLKIL+FT++ +SLWA+TVL+LYIRVQVNILGRH+Y+DTARG+G+S+L
Sbjct: 109  TLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMYIDTARGLGSSHL 168

Query: 870  LEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAVTEVLKGKQLRDLFNTTLLQ 691
            LEE D  DR     QQ FLA +D+L  YG+  LI  +Q+AV EVLK KQLRD+FNTT+L+
Sbjct: 169  LEEADLIDRE---DQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRKQLRDVFNTTVLR 225

Query: 690  ETALQILKTFMNVGDLHHWMSYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGE 511
            ET  QI+K FM+    HHW+ Y++P D     QS I  + S+DD +V P  NK DQL+ E
Sbjct: 226  ETTTQIIKIFMSTASPHHWLDYVMPGD----NQSSITDTLSTDDDAVAPNFNKFDQLMME 281

Query: 510  ARAVLLSAEFGNVMEVSLRSVVDALMKDV--GLQSGGNPSSGVPLAKLLPRIAQMGPLLL 337
             RAVLLSAEFGN+ME SL   VD LM+++   L  G + +SG+PLA+L+PR+AQMG LLL
Sbjct: 282  TRAVLLSAEFGNIMERSLEVGVDGLMEEMEASLAGGSSKASGIPLARLVPRVAQMGLLLL 341

Query: 336  EEPSNNQFIRIIQSLPEVELFYTLLYANTP 247
            E+P  ++FI++I+ +PEVE+F+TLLYAN P
Sbjct: 342  EDPIKSRFIQMIRGIPEVEIFFTLLYANMP 371


>ref|XP_004137328.1| PREDICTED: peroxisome biogenesis protein 3-2-like [Cucumis sativus]
          Length = 373

 Score =  307 bits (786), Expect = 3e-81
 Identities = 156/270 (57%), Positives = 206/270 (76%), Gaps = 2/270 (0%)
 Frame = -2

Query: 1050 TLTSLEKIEIWENLKILNFTRLAVSLWAMTVLNLYIRVQVNILGRHLYLDTARGMGASYL 871
            TLT  EK+++WENLKIL+FT++ +SLWA+TVL+LYIRVQVNILGRH+Y+DTARG+G+S+L
Sbjct: 109  TLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMYIDTARGLGSSHL 168

Query: 870  LEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAVTEVLKGKQLRDLFNTTLLQ 691
            LEE D  DR     QQ FLA +D+L  YG+  LI  +Q+AV EVLK KQLRD+FNTT+L+
Sbjct: 169  LEEADLIDRE---DQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRKQLRDVFNTTVLR 225

Query: 690  ETALQILKTFMNVGDLHHWMSYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGE 511
            ET  QI+K FM+    HHW+ Y++P D     QS I  + S+DD +V P  NK DQL+ E
Sbjct: 226  ETTTQIIKIFMSTASPHHWLDYVMPGD----NQSSITDTLSTDDDAVAPNFNKFDQLMME 281

Query: 510  ARAVLLSAEFGNVMEVSLRSVVDALMKDV--GLQSGGNPSSGVPLAKLLPRIAQMGPLLL 337
             RAVLLS EFGN+ME SL   VD LM+++   L  G + +SG+PLA+L+PR+AQMG LLL
Sbjct: 282  TRAVLLSVEFGNIMERSLEVGVDGLMEEMEASLAGGSSKASGIPLARLVPRVAQMGLLLL 341

Query: 336  EEPSNNQFIRIIQSLPEVELFYTLLYANTP 247
            E+P  ++FI++I+ +PEVE+F+TLLYAN P
Sbjct: 342  EDPIKSRFIQMIRGIPEVEIFFTLLYANMP 371


>ref|XP_002317886.1| predicted protein [Populus trichocarpa] gi|222858559|gb|EEE96106.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  295 bits (755), Expect = 1e-77
 Identities = 157/269 (58%), Positives = 202/269 (75%), Gaps = 3/269 (1%)
 Frame = -2

Query: 1050 TLTSLEKIEIWENLKILNFTRLAVSLWAMTVLNLYIRVQVNILGRHLYLDTARGMGASYL 871
            TLTS EK+E+W+ LKIL+FT++ VSLWA+T+L+LYI+VQVNILGRHLY+DTARG+G+S L
Sbjct: 109  TLTSSEKLELWDRLKILSFTQMVVSLWAVTILSLYIKVQVNILGRHLYIDTARGLGSSLL 168

Query: 870  LEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAVTEVLKGKQLRDLFNTTLLQ 691
            LE VD  DR     QQ FLA AD+L+  G++ LI N+Q  VTEV++GK+L DLFNTT   
Sbjct: 169  LENVDLIDRD---DQQNFLAGADFLANNGLLALISNIQAVVTEVIEGKKLIDLFNTTSFH 225

Query: 690  ETALQILKTFMNVGDLHHWMSYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGE 511
            ET +QIL  FM+VG LH W+ YL+PED+  Y+   +  S S DDT V P     DQL+ E
Sbjct: 226  ETVMQILDKFMSVGSLHQWIDYLMPEDSGHYK---LGTSSSIDDT-VLPNSTNFDQLMVE 281

Query: 510  ARAVLLSAEFGNVMEVSLRSVVDALMKDVGLQ---SGGNPSSGVPLAKLLPRIAQMGPLL 340
            AR VL SAEFG +M +SL+  VDAL++D+  Q   +G + +SG+PLAKLL R+ QM P L
Sbjct: 282  ARTVLSSAEFGKIMGISLKVAVDALVEDMEAQCQSTGASLTSGMPLAKLLSRVMQMVPSL 341

Query: 339  LEEPSNNQFIRIIQSLPEVELFYTLLYAN 253
            L E S NQFI+II+++PEVELF+TLLYAN
Sbjct: 342  LREASQNQFIKIIRTVPEVELFFTLLYAN 370


>ref|XP_002322084.1| predicted protein [Populus trichocarpa] gi|222869080|gb|EEF06211.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  285 bits (728), Expect = 2e-74
 Identities = 154/272 (56%), Positives = 198/272 (72%), Gaps = 3/272 (1%)
 Frame = -2

Query: 1050 TLTSLEKIEIWENLKILNFTRLAVSLWAMTVLNLYIRVQVNILGRHLYLDTARGMGASYL 871
            TLTS EK+E+W+ LKIL+FT++ VSLWA+T+L+LYI+VQVNILGRHLY+DTARG+G+S L
Sbjct: 109  TLTSSEKLELWDRLKILSFTQMLVSLWAVTMLSLYIKVQVNILGRHLYIDTARGLGSSLL 168

Query: 870  LEEVDQFDRHGQVSQQVFLATADYLSKYGMVKLIHNMQMAVTEVLKGKQLRDLFNTTLLQ 691
            LE VD  DR     QQ FLA+AD+L+  G++ LI N+Q  VTEVL+GK+L DLFNTT L 
Sbjct: 169  LENVDLVDRD---DQQKFLASADFLANNGLLALISNIQAVVTEVLEGKKLTDLFNTTSLH 225

Query: 690  ETALQILKTFMNVGDLHHWMSYLLPEDANSYEQSMIAYSKSSDDTSVHPGVNKLDQLIGE 511
            ET +QIL  FM++G  H W+ YL+PED    +        SS D  + P     DQL+ E
Sbjct: 226  ETVMQILNKFMSMGSPHQWIDYLMPEDCGHCKLG----PSSSIDDMILPDSMNFDQLMVE 281

Query: 510  ARAVLLSAEFGNVMEVSLRSVVDALMKDVGLQS---GGNPSSGVPLAKLLPRIAQMGPLL 340
            ARAVL SAEFG +ME+SL+  VDAL+ D+  QS   G + + G+PLAKLL R+ Q+ P L
Sbjct: 282  ARAVLSSAEFGKIMEISLKVAVDALVDDMEAQSQSTGASLTLGMPLAKLLSRVLQIVPSL 341

Query: 339  LEEPSNNQFIRIIQSLPEVELFYTLLYANTPL 244
            L E S NQ I+II+++PEVELF+TLLYAN  L
Sbjct: 342  LGEASQNQIIQIIRNVPEVELFFTLLYANNLL 373


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