BLASTX nr result

ID: Coptis25_contig00001219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001219
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX25891.1| ERF transcription factor 5 [Glycine max]               110   6e-22
ref|XP_003545604.1| PREDICTED: ethylene-responsive transcription...   110   6e-22
emb|CBI26688.3| unnamed protein product [Vitis vinifera]              107   4e-21
ref|XP_002275892.1| PREDICTED: ethylene-responsive transcription...   107   5e-21
dbj|BAL68173.1| ethylene response factor #229 [Nicotiana tabacum]     105   1e-20

>gb|AEX25891.1| ERF transcription factor 5 [Glycine max]
          Length = 211

 Score =  110 bits (274), Expect = 6e-22
 Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
 Frame = +1

Query: 208 RGRGSAKETNNNNIESKEMKFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSXXXXXXXX 387
           RGR +A   +    ++KE +FRGVRKRPWGR+AAEIRDPWKK RVWLGTFDS        
Sbjct: 3   RGRATAAVVDPTAEQAKETRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAY 62

Query: 388 XXXXXNLRGPKAKTNFP-------------CPPL--PHPISFPAEEYQVQRPTXXXXXXX 522
                + RGPKAKTNFP              PPL   H +S   E  QV RPT       
Sbjct: 63  DKAARSFRGPKAKTNFPSFPGPTDHHSSQQIPPLYQAHGLSTKFEPAQVNRPTTSGMSST 122

Query: 523 XXXXXGPRVQTLSQRHHLP-----PVLP 591
                GPRV   S     P     P++P
Sbjct: 123 VESFSGPRVPPSSSSSRKPLVVVNPIIP 150


>ref|XP_003545604.1| PREDICTED: ethylene-responsive transcription factor 3-like [Glycine
           max]
          Length = 212

 Score =  110 bits (274), Expect = 6e-22
 Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
 Frame = +1

Query: 208 RGRGSAKETNNNNIESKEMKFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSXXXXXXXX 387
           RGR +A   +    ++KE +FRGVRKRPWGR+AAEIRDPWKK RVWLGTFDS        
Sbjct: 3   RGRATAAVVDPTAEQAKETRFRGVRKRPWGRFAAEIRDPWKKQRVWLGTFDSAEDAARAY 62

Query: 388 XXXXXNLRGPKAKTNFP-------------CPPL--PHPISFPAEEYQVQRPTXXXXXXX 522
                + RGPKAKTNFP              PPL   H +S   E  QV RPT       
Sbjct: 63  DKAARSFRGPKAKTNFPSFPGPTDHHSSQQIPPLYQAHGLSTKFEPAQVNRPTTSGMSST 122

Query: 523 XXXXXGPRVQTLSQRHHLP-----PVLP 591
                GPRV   S     P     P++P
Sbjct: 123 VESFSGPRVPPSSSSSRKPLVVVNPIIP 150


>emb|CBI26688.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  107 bits (267), Expect = 4e-21
 Identities = 57/119 (47%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
 Frame = +1

Query: 256 KEMKFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXXNLRGPKAKTNF 435
           K+M++RGVRKRPWGR+AAEIRDPWKKTRVWLGTFDS              LRGPKAKTNF
Sbjct: 80  KDMRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSPEEAARAYDAAARTLRGPKAKTNF 139

Query: 436 PCPPLPHPISFPAEEYQVQRPTXXXXXXXXXXXXGPR-------VQTLSQRHHLPPVLP 591
           P       ++F  ++   QRPT            GPR         TL +    PP+LP
Sbjct: 140 PAVS-GAAVAFQEQQIHAQRPTSSGMSSTVESFSGPRPAPANLPPATLRRHPRSPPLLP 197


>ref|XP_002275892.1| PREDICTED: ethylene-responsive transcription factor 3-like [Vitis
           vinifera]
          Length = 204

 Score =  107 bits (266), Expect = 5e-21
 Identities = 63/142 (44%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
 Frame = +1

Query: 208 RGRGSAKETNNNNI---ESKEMKFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSXXXXX 378
           RGR +A++         + K+++FRGVRKRPWGR+AAEIRDPWKKTRVWLGTFDS     
Sbjct: 3   RGRATARDAPQQQEVRNQGKDVRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAA 62

Query: 379 XXXXXXXXNLRGPKAKTNF----PCPPLPHPISFPAE----------EYQVQRPTXXXXX 516
                   +LRGPKAKTNF    P  PL  P   P++          ++Q QRPT     
Sbjct: 63  RAYDAAARSLRGPKAKTNFPLSSPAVPLTVPFQQPSQYQIQDQNHSHQHQPQRPTTSGMS 122

Query: 517 XXXXXXXGPRVQTLSQRHHLPP 582
                  GPR   LS     PP
Sbjct: 123 STVESFSGPR---LSNPPSAPP 141


>dbj|BAL68173.1| ethylene response factor #229 [Nicotiana tabacum]
          Length = 221

 Score =  105 bits (262), Expect = 1e-20
 Identities = 72/196 (36%), Positives = 80/196 (40%), Gaps = 31/196 (15%)
 Frame = +1

Query: 256 KEMKFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSXXXXXXXXXXXXXNLRGPKAKTNF 435
           K+++FRGVRKR WGR+AAEIRDPWKKTRVWLGTFDS              LRGPKAKTNF
Sbjct: 26  KDIRFRGVRKRQWGRFAAEIRDPWKKTRVWLGTFDSAEEAAKAYDAAARTLRGPKAKTNF 85

Query: 436 PCPPLPH-------------PISFPAEEYQ--VQRPTXXXXXXXXXXXXGPR------VQ 552
           P PP  H             P  +  E +   +QRPT            GPR        
Sbjct: 86  PLPPYSHFNQTINPNGPFIDPRLYSQENHPIVIQRPTSSSMSSTVESFSGPRPPPRQQTA 145

Query: 553 TLSQRHH--LPPVLP--------XXXXXXXXXXXXXXXXXXXXXXXXFRKXXXXXXXXXX 702
            L  R H   PPV+P                                FRK          
Sbjct: 146 VLPSRKHPRSPPVVPDDCRSDCDSSSSVVEDGDCDNDNENDNIVSSAFRKPLPFDLNFPP 205

Query: 703 XXXVDGDDFQSTALCL 750
               D DD   TALCL
Sbjct: 206 PMDADSDDLHCTALCL 221


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