BLASTX nr result
ID: Coptis25_contig00001214
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001214
(1067 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera] 392 e-106
ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44... 391 e-106
ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|2... 379 e-103
ref|XP_002309282.1| f-box family protein [Populus trichocarpa] g... 373 e-101
ref|XP_002304005.1| f-box family protein [Populus trichocarpa] g... 367 4e-99
>emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]
Length = 343
Score = 392 bits (1006), Expect = e-106
Identities = 187/334 (55%), Positives = 241/334 (72%)
Frame = +2
Query: 47 ETIPGLPEEIGFECMTRFSYTTHQIASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 226
E IPGLPEEI EC TR YT+H++A+QVCRRW E+L+ EFY RKQ+GFTHK ACLVQ
Sbjct: 6 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYXRKQTGFTHKAACLVQ 65
Query: 227 SLPVQPDTKIQKPTAQLSYGITIYDPTNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 406
+LPV ++ +KP SYGI+++D + +W R+ P+PKYP GLPLF Q+T EGKL+VM
Sbjct: 66 ALPVLSESDGRKPVRPPSYGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLVVM 125
Query: 407 GGWNPVSWDPVMDVFVYDFTTREWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 586
GGW+P S+DPV DVFVYDFTTR W+QG+DMPSKRSFFA+ L G++++AGGHD++KNAL
Sbjct: 126 GGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNALS 185
Query: 587 SAWSYNVINDAWTKLTQMNEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 766
+AW Y+V D W++LT+M++ERDEC+GVVIG+EF VVSGYGTE QG F SAE +LET
Sbjct: 186 TAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLETG 245
Query: 767 QWRRVEGVWIEGKXXXXXXXXXXXXXXXXXXXXXPRWNVGVSKEHETLICLAELDSAVRV 946
+W RV+ W PR VGV K+ + L AE D+AV V
Sbjct: 246 RWSRVDEAW--------------------GTNQCPRSCVGVGKDGK-LFSWAESDTAVGV 284
Query: 947 GVCGVEFGELTLVTGSAYQGASQEFYMIQMKEGE 1048
G C V+ G+ TL+TGSAYQGA Q F++++ KEG+
Sbjct: 285 GACAVDLGDWTLLTGSAYQGAPQGFFLVERKEGQ 318
>ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44130 [Vitis vinifera]
Length = 355
Score = 391 bits (1005), Expect = e-106
Identities = 187/334 (55%), Positives = 241/334 (72%)
Frame = +2
Query: 47 ETIPGLPEEIGFECMTRFSYTTHQIASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 226
E IPGLPEEI EC TR YT+H++A+QVCRRW E+L+ EFY RKQ+GFTHK ACLVQ
Sbjct: 18 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYLRKQTGFTHKAACLVQ 77
Query: 227 SLPVQPDTKIQKPTAQLSYGITIYDPTNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 406
+LPV ++ +KP SYGI+++D + +W R+ P+PKYP GLPLF Q+T EGKL+VM
Sbjct: 78 ALPVLSESDGRKPVRPPSYGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLVVM 137
Query: 407 GGWNPVSWDPVMDVFVYDFTTREWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 586
GGW+P S+DPV DVFVYDFTTR W+QG+DMPSKRSFFA+ L G++++AGGHD++KNAL
Sbjct: 138 GGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNALS 197
Query: 587 SAWSYNVINDAWTKLTQMNEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 766
+AW Y+V D W++LT+M++ERDEC+GVVIG+EF VVSGYGTE QG F SAE +LET
Sbjct: 198 TAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLETG 257
Query: 767 QWRRVEGVWIEGKXXXXXXXXXXXXXXXXXXXXXPRWNVGVSKEHETLICLAELDSAVRV 946
+W RV+ W PR VGV K+ + L AE D+AV V
Sbjct: 258 RWSRVDEAW--------------------GTNQCPRSCVGVGKDGK-LFSWAESDTAVGV 296
Query: 947 GVCGVEFGELTLVTGSAYQGASQEFYMIQMKEGE 1048
G C V+ G+ TL+TGSAYQGA Q F++++ KEG+
Sbjct: 297 GACAVDLGDWTLLTGSAYQGAPQGFFLVERKEGQ 330
>ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|222844899|gb|EEE82446.1|
predicted protein [Populus trichocarpa]
Length = 345
Score = 379 bits (974), Expect = e-103
Identities = 183/340 (53%), Positives = 237/340 (69%)
Frame = +2
Query: 47 ETIPGLPEEIGFECMTRFSYTTHQIASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 226
E IP LP+E+G ECMTR YT H++ASQVC++WRE+LES +FY RK+ G+THK+ACLVQ
Sbjct: 8 EFIPSLPQELGLECMTRLPYTAHRVASQVCKQWRELLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 227 SLPVQPDTKIQKPTAQLSYGITIYDPTNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 406
+ ++ KP S+GIT++D + +W RLDP+PKYP GLPLF QL EGKL+VM
Sbjct: 68 AAHRADVSQGSKPGNSPSFGITVFDSVSQTWQRLDPVPKYPNGLPLFCQLASCEGKLVVM 127
Query: 407 GGWNPVSWDPVMDVFVYDFTTREWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 586
GGW+PVS++ V VFVYDFTTR+WR+GK+MPSKRSFFA A +G++Y+ GGHDENKNALK
Sbjct: 128 GGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGAYSGRIYVVGGHDENKNALK 187
Query: 587 SAWSYNVINDAWTKLTQMNEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 766
+ W Y++ + WT+L QM++ERDECEGVVIG+EF VSGY T+ QG+F SAE YE +
Sbjct: 188 TGWVYDLSKEEWTELNQMSQERDECEGVVIGDEFWAVSGYRTDNQGEFEESAEVYEFRSG 247
Query: 767 QWRRVEGVWIEGKXXXXXXXXXXXXXXXXXXXXXPRWNVGVSKEHETLICLAELDSAVRV 946
QWRRV+ WI G+ PR +VG K+ L+ A+LD AVRV
Sbjct: 248 QWRRVKEAWIPGR--------------------CPRSSVGAGKDGR-LMSWADLDPAVRV 286
Query: 947 GVCGVEFGELTLVTGSAYQGASQEFYMIQMKEGEKCCLNK 1066
V G+ FG +V GS GA Q FYM++MK+G+ L K
Sbjct: 287 AVRGIMFGFRVMVAGSDSPGAPQGFYMVEMKDGQNGQLEK 326
>ref|XP_002309282.1| f-box family protein [Populus trichocarpa]
gi|222855258|gb|EEE92805.1| f-box family protein [Populus
trichocarpa]
Length = 337
Score = 373 bits (957), Expect = e-101
Identities = 177/334 (52%), Positives = 231/334 (69%)
Frame = +2
Query: 47 ETIPGLPEEIGFECMTRFSYTTHQIASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 226
E IP LP+EI EC+ R YTTH++ASQVC+RWR +L+S +FY QRKQ+G THK ACL+Q
Sbjct: 3 ELIPSLPDEIALECLFRLHYTTHRVASQVCKRWRPVLQSRDFYYQRKQNGLTHKAACLIQ 62
Query: 227 SLPVQPDTKIQKPTAQLSYGITIYDPTNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 406
++P Q + KP YG++I+D N SW R+DP+P YP GLPLF Q+T EGKL+++
Sbjct: 63 AIPDQNGSSQPKPIGPPKYGVSIFDSVNGSWDRVDPVPAYPDGLPLFCQVTSSEGKLVLL 122
Query: 407 GGWNPVSWDPVMDVFVYDFTTREWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 586
GGW+PV ++P+ VFVY+FTTR+WR+GKDMP RSFFA LNG++ IAGGHDENKNALK
Sbjct: 123 GGWDPVKYEPLSQVFVYEFTTRQWRRGKDMPENRSFFAVGELNGRIIIAGGHDENKNALK 182
Query: 587 SAWSYNVINDAWTKLTQMNEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 766
+AW Y+VI D W +L QM++ERDECEGVVIG+EF VVSGY T+ QG F GSAE EL S
Sbjct: 183 TAWVYDVIQDEWAELPQMSQERDECEGVVIGSEFWVVSGYRTDSQGGFEGSAESIELGAS 242
Query: 767 QWRRVEGVWIEGKXXXXXXXXXXXXXXXXXXXXXPRWNVGVSKEHETLICLAELDSAVRV 946
+W+RVE W + PR ++GV + E L AE DSA++V
Sbjct: 243 KWKRVEDAWKASQ--------------------CPRSSLGVGSD-EKLFSWAESDSALKV 281
Query: 947 GVCGVEFGELTLVTGSAYQGASQEFYMIQMKEGE 1048
G V GE T V+GSA++G Q F+++ + G+
Sbjct: 282 GASSVHLGEKTFVSGSAHEGGPQGFFLVDGQNGK 315
>ref|XP_002304005.1| f-box family protein [Populus trichocarpa]
gi|222841437|gb|EEE78984.1| f-box family protein [Populus
trichocarpa]
Length = 345
Score = 367 bits (941), Expect = 4e-99
Identities = 175/340 (51%), Positives = 234/340 (68%)
Frame = +2
Query: 47 ETIPGLPEEIGFECMTRFSYTTHQIASQVCRRWREILESNEFYKQRKQSGFTHKLACLVQ 226
E IP LP+E+G ECMTR YT H++ASQVC++W ++LES +FY RK+ G+THK+ACLVQ
Sbjct: 8 ELIPSLPQELGLECMTRLPYTAHRVASQVCKQWCDLLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 227 SLPVQPDTKIQKPTAQLSYGITIYDPTNTSWARLDPIPKYPFGLPLFSQLTCVEGKLIVM 406
++ + K +GI+++D + +W RLDP+P YP LPLF QL EGKL+VM
Sbjct: 68 AVHGADVLQGSKQGNSPCFGISVFDSASQTWERLDPVPNYPIELPLFCQLASCEGKLVVM 127
Query: 407 GGWNPVSWDPVMDVFVYDFTTREWRQGKDMPSKRSFFASAALNGQVYIAGGHDENKNALK 586
GGW+PVS++ V VFVYDFTTR+WR+GK+MPSKRSFFA + +G+VY+ GGHDENKNAL+
Sbjct: 128 GGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGSYSGRVYVVGGHDENKNALR 187
Query: 587 SAWSYNVINDAWTKLTQMNEERDECEGVVIGNEFCVVSGYGTEEQGKFRGSAEFYELETS 766
+ W Y++ D WT+L QM++ERDECEGVVIG+EF VVSGYGT+ QG F G+AE YE +
Sbjct: 188 TGWVYDLSKDEWTELAQMSQERDECEGVVIGDEFWVVSGYGTDNQGAFEGNAEVYEFGSG 247
Query: 767 QWRRVEGVWIEGKXXXXXXXXXXXXXXXXXXXXXPRWNVGVSKEHETLICLAELDSAVRV 946
QWR+V+ WI G+ PR VGV K+ L+ A+LD VR
Sbjct: 248 QWRQVKKAWIPGR--------------------CPRSCVGVGKDGR-LMSWADLDPMVRA 286
Query: 947 GVCGVEFGELTLVTGSAYQGASQEFYMIQMKEGEKCCLNK 1066
GV G+ G ++TG QG+ +EFY+I+MK+G+ L K
Sbjct: 287 GVRGIPLGSRVMLTGLDNQGSPEEFYLIEMKDGQNGKLEK 326