BLASTX nr result

ID: Coptis25_contig00001213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001213
         (1617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19037.3| unnamed protein product [Vitis vinifera]              456   e-125
ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis...   453   e-125
ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [...   439   e-121
ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|2...   425   e-116
ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116

>emb|CBI19037.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  456 bits (1172), Expect = e-125
 Identities = 229/361 (63%), Positives = 281/361 (77%), Gaps = 3/361 (0%)
 Frame = -1

Query: 1590 MGDQGKYRNLIANFSKVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATI 1411
            MGDQ  +  L   FSKVKAYL +V+LQ GYAGM I+TM+ L  G+NH +LVVYR+A AT+
Sbjct: 1    MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 1410 AVAPFALIFERKIRPKMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQP 1231
             +APFAL+ ERK+RPKMT+S F+KIM LG +EPV+DQNLYY+GMKYTSATFASA +N+ P
Sbjct: 61   VIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVLP 120

Query: 1230 AVTFTMAIIFRLEKVKIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGX 1051
            A+TF +AIIFRLEK+ IK I  QAK+ GT++++ GAM+MTLYKGPIID + +   +H   
Sbjct: 121  AITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHH-E 179

Query: 1050 XXXXXXTAQNWFVGTLMLLGSCTTWSGFFILQSITLKEYPAELSLTSLIVFMGVIQGGVV 871
                    QNW  GTLMLLGSC  WSGFFILQS TLK+YPAELSLT+LI FMG +QG  V
Sbjct: 180  SSSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAV 239

Query: 870  ALVMERDFSAWVIGFDSRLLAPIYSGIVGSAFAYYVQGVVMKDRGPVFVTAFNPLCMIIV 691
            ALVMERD +AW +GFDSR+LA  YSG+V S  AYYVQ +V+K+RGPVFVTAF+PLCMII 
Sbjct: 240  ALVMERDKAAWAVGFDSRILAAAYSGVVCSGIAYYVQSLVIKERGPVFVTAFSPLCMIIT 299

Query: 690  AVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKD--QSGSSTLTNGNA-SCFELPIA 520
            A LG+ I+AE LHLGS++G+ VIVVGLYSV+WGKSK+   S S   T+  A    ELP+A
Sbjct: 300  AALGSFILAEKLHLGSILGAAVIVVGLYSVVWGKSKEARSSASQAPTDEKAGGSHELPVA 359

Query: 519  A 517
            +
Sbjct: 360  S 360


>ref|XP_002285845.2| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 389

 Score =  453 bits (1166), Expect = e-125
 Identities = 222/343 (64%), Positives = 273/343 (79%)
 Frame = -1

Query: 1590 MGDQGKYRNLIANFSKVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATI 1411
            MGDQ  +  L   FSKVKAYL +V+LQ GYAGM I+TM+ L  G+NH +LVVYR+A AT+
Sbjct: 1    MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATL 60

Query: 1410 AVAPFALIFERKIRPKMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQP 1231
             +APFAL+ ERK+RPKMT+S F+KIM LG +EPV+DQNLYY+GMKYTSATFASA +N+ P
Sbjct: 61   VIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVLP 120

Query: 1230 AVTFTMAIIFRLEKVKIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGX 1051
            A+TF +AIIFRLEK+ IK I  QAK+ GT++++ GAM+MTLYKGPIID + +   +H   
Sbjct: 121  AITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHH-E 179

Query: 1050 XXXXXXTAQNWFVGTLMLLGSCTTWSGFFILQSITLKEYPAELSLTSLIVFMGVIQGGVV 871
                    QNW  GTLMLLGSC  WSGFFILQS TLK+YPAELSLT+LI FMG +QG  V
Sbjct: 180  SSSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAV 239

Query: 870  ALVMERDFSAWVIGFDSRLLAPIYSGIVGSAFAYYVQGVVMKDRGPVFVTAFNPLCMIIV 691
            ALVMERD +AW +GFDSR+LA  YSG+V S  AYYVQ +V+K+RGPVFVTAF+PLCMII 
Sbjct: 240  ALVMERDKAAWAVGFDSRILAAAYSGVVCSGIAYYVQSLVIKERGPVFVTAFSPLCMIIT 299

Query: 690  AVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKDQSGSST 562
            A LG+ I+AE LHLGS++G+ VIVVGLYSV+WGKSK+   S++
Sbjct: 300  AALGSFILAEKLHLGSILGAAVIVVGLYSVVWGKSKEARSSAS 342


>ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
            gi|302141836|emb|CBI19039.3| unnamed protein product
            [Vitis vinifera]
          Length = 382

 Score =  439 bits (1130), Expect = e-121
 Identities = 216/367 (58%), Positives = 276/367 (75%), Gaps = 1/367 (0%)
 Frame = -1

Query: 1590 MGDQGKYRNLIANFSKVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATI 1411
            M DQ     +   FS++K Y+ MV LQ G AGM I++M  LN G++  +L+VYRNA A +
Sbjct: 1    MEDQTSCAKICVVFSRMKPYVLMVALQFGSAGMYIISMATLNHGMSRFVLIVYRNAVAAL 60

Query: 1410 AVAPFALIFERKIRPKMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQP 1231
            A+APFAL+ ERKIRPK+TI+IF+KIMALG +EP++DQNL Y+GM+YTSA+F SA++N  P
Sbjct: 61   AMAPFALLLERKIRPKITIAIFLKIMALGFLEPILDQNLSYLGMQYTSASFTSAVMNAVP 120

Query: 1230 AVTFTMAIIFRLEKVKIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGX 1051
            AVTF MA++FRLE +KIK    QAKI GT+++  GA++MTLYKGPIID++WS + +H+  
Sbjct: 121  AVTFVMAVVFRLEHIKIKERRSQAKIVGTVLTFSGALLMTLYKGPIIDLIWSHKTSHNAN 180

Query: 1050 XXXXXXTAQNWFVGTLMLLGSCTTWSGFFILQSITLKEYPAELSLTSLIVFMGVIQGGVV 871
                     +W  GTL++L  C  WS F+ILQSIT+K YPAELSL++LI  MG IQ G V
Sbjct: 181  HSSTDT---HWITGTLLILVGCCAWSAFYILQSITIKTYPAELSLSTLICLMGAIQSGAV 237

Query: 870  ALVMERDFSAWVIGFDSRLLAPIYSGIVGSAFAYYVQGVVMKDRGPVFVTAFNPLCMIIV 691
             LV ER  SAW IG+DSRLLAP+Y+GIV S   YYVQG+VMK RGPVFVTAFNPLCMIIV
Sbjct: 238  GLVAERHPSAWAIGWDSRLLAPVYTGIVSSGLTYYVQGLVMKTRGPVFVTAFNPLCMIIV 297

Query: 690  AVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKDQSG-SSTLTNGNASCFELPIAAK 514
            A LGT+I+AE LHLGS+IG+++I +GLYSV WGKSKDQ G + T T      +ELPI+A 
Sbjct: 298  AALGTLILAEQLHLGSIIGAIIIAIGLYSVAWGKSKDQFGPTPTTTEEKGDAYELPISAT 357

Query: 513  YSNKIGI 493
              +K+ I
Sbjct: 358  EGSKLVI 364


>ref|XP_002302243.1| predicted protein [Populus trichocarpa] gi|222843969|gb|EEE81516.1|
            predicted protein [Populus trichocarpa]
          Length = 349

 Score =  425 bits (1093), Expect = e-116
 Identities = 206/329 (62%), Positives = 259/329 (78%)
 Frame = -1

Query: 1545 KVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATIAVAPFALIFERKIRP 1366
            KVK YLAMV+LQ GYAGM I+TM+ L  G++H IL VYR+  ATI +APFAL+ ERKIRP
Sbjct: 3    KVKPYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATIVIAPFALVLERKIRP 62

Query: 1365 KMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQPAVTFTMAIIFRLEKV 1186
            K+T+ IF++IMALG +EPV+DQNLYY+GMKYTSATFASA +N  PA+TF MA+IFRLE V
Sbjct: 63   KLTLPIFLRIMALGFLEPVLDQNLYYLGMKYTSATFASATVNALPAITFIMALIFRLETV 122

Query: 1185 KIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGXXXXXXXTAQNWFVGT 1006
              K +H  AK+ GT++++ GAM+MTLYKGPIID + S    H G         Q+W  GT
Sbjct: 123  NFKKLHSAAKVVGTVITVTGAMVMTLYKGPIIDFIRSQGAAHRGTTSNASGN-QHWLTGT 181

Query: 1005 LMLLGSCTTWSGFFILQSITLKEYPAELSLTSLIVFMGVIQGGVVALVMERDFSAWVIGF 826
            LMLL SC  W+ FFILQS TLK+YPAELSLT+LI   G+++G  V+LVMERD SAW IGF
Sbjct: 182  LMLLASCCGWASFFILQSFTLKKYPAELSLTALICMTGMVEGAAVSLVMERDMSAWKIGF 241

Query: 825  DSRLLAPIYSGIVGSAFAYYVQGVVMKDRGPVFVTAFNPLCMIIVAVLGTMIIAEPLHLG 646
            DSRLLA  YSG+V S  AYYVQGVV++ +GPVFVT+F+PLCMII A LG+++++E + LG
Sbjct: 242  DSRLLAAAYSGVVCSGIAYYVQGVVIRKKGPVFVTSFSPLCMIITAALGSVVLSEQIRLG 301

Query: 645  SLIGSLVIVVGLYSVIWGKSKDQSGSSTL 559
            S+IG+++IV GLY+V+WGKSKD   SST+
Sbjct: 302  SIIGAVLIVFGLYTVVWGKSKDSISSSTM 330


>ref|XP_002306626.1| predicted protein [Populus trichocarpa] gi|222856075|gb|EEE93622.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  424 bits (1090), Expect = e-116
 Identities = 210/343 (61%), Positives = 263/343 (76%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1545 KVKAYLAMVTLQCGYAGMVILTMLCLNRGLNHNILVVYRNAAATIAVAPFALIFERKIRP 1366
            KVK YLAMV+LQ GYAGM I+TM+ L  G++H IL VYR+  AT+ +APFA + ERKIRP
Sbjct: 3    KVKHYLAMVSLQFGYAGMYIITMVSLKHGMSHYILAVYRHVVATLVIAPFAFVLERKIRP 62

Query: 1365 KMTISIFIKIMALGLIEPVIDQNLYYMGMKYTSATFASAILNIQPAVTFTMAIIFRLEKV 1186
            K+T+SIF++IM LG +EPV+DQNLYY+GMKYTSATF+SA  N  PA+TF MA+ FRLE V
Sbjct: 63   KLTLSIFLRIMVLGFLEPVLDQNLYYLGMKYTSATFSSATTNALPAITFLMALCFRLETV 122

Query: 1185 KIKSIHGQAKIAGTIVSLGGAMIMTLYKGPIIDMVWSTRENHSGXXXXXXXTAQNWFVGT 1006
              K +H  AK  GT++++ GAM+MTLYKGP+ID + S    H G         Q+   GT
Sbjct: 123  NFKKLHSAAKAIGTVITVTGAMVMTLYKGPVIDFIRSHGAAHHGTSNESGN--QHRLTGT 180

Query: 1005 LMLLGSCTTWSGFFILQSITLKEYPAELSLTSLIVFMGVIQGGVVALVMERDFSAWVIGF 826
            LMLLGSC  W+GFFILQS TLK+YPAELSLT+LI  MGV++G  V+LVMERD  AW IGF
Sbjct: 181  LMLLGSCCAWAGFFILQSFTLKKYPAELSLTALICVMGVVEGAAVSLVMERDMGAWKIGF 240

Query: 825  DSRLLAPIYSGIVGSAFAYYVQGVVMKDRGPVFVTAFNPLCMIIVAVLGTMIIAEPLHLG 646
            DSRLLA  YSG+V S  AYYVQGVV+++RGPVFVT+F+PLCMI  A LG++++AE +HLG
Sbjct: 241  DSRLLAAAYSGVVCSGIAYYVQGVVIRERGPVFVTSFSPLCMITTAALGSLVLAEQIHLG 300

Query: 645  SLIGSLVIVVGLYSVIWGKSKDQSGSSTL--TNGNASCFELPI 523
            S+IG+++IV GLY+V+WGKSK++  SS L  TN      ELPI
Sbjct: 301  SIIGAVLIVWGLYTVVWGKSKERINSSKLQMTNEKTGTQELPI 343


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