BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001211
         (1834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883939.1| hypothetical protein ARALYDRAFT_899844 [Arab...   310   e-137
ref|NP_849997.2| CLIP-associated protein [Arabidopsis thaliana] ...   307   e-137
dbj|BAE98846.1| hypothetical protein [Arabidopsis thaliana]           307   e-137
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   367   e-104
ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|2...   365   e-104

>ref|XP_002883939.1| hypothetical protein ARALYDRAFT_899844 [Arabidopsis lyrata subsp.
            lyrata] gi|297329779|gb|EFH60198.1| hypothetical protein
            ARALYDRAFT_899844 [Arabidopsis lyrata subsp. lyrata]
          Length = 1439

 Score =  310 bits (794), Expect(3) = e-137
 Identities = 181/344 (52%), Positives = 232/344 (67%), Gaps = 13/344 (3%)
 Frame = -3

Query: 1529 VINEERGGVHRRYASPSLRDRGGQSLHTPSQTPTCNVPGYGTSAIVAMDRSATLPSGTPL 1350
            +INEE GG+HRR+ASPS+R+R  Q   + +  P+ N+PGYGTSAIVAMDRS+ L SG  L
Sbjct: 499  LINEEDGGIHRRHASPSVRERHSQPSFSQTSAPS-NLPGYGTSAIVAMDRSSNLSSGGSL 557

Query: 1349 SSGLVLSQAKSLGKGTERSLESVLHASKQKVRSIESKLRGLDISDKP----LRSTSLDLG 1182
            SSGL+LSQ+K + KG+ERSLESVL +SKQKV +IES LRGL ISD+     LRS+SLDLG
Sbjct: 558  SSGLLLSQSKDVNKGSERSLESVLQSSKQKVSAIESMLRGLHISDRQNPAALRSSSLDLG 617

Query: 1181 VDTP*ARDPPFPLAAPSSSHLMDSVLARFNCLQYF*SYKSEQWVNN------IRSYQCSG 1020
            VD P +RDPPF  A P+S++   S  A         S  S    NN      +       
Sbjct: 618  VDPPSSRDPPFHAAVPASNNHTSSAAAE--------STHSINKGNNRNGGLGLSDIITQI 669

Query: 1019 SASKDPGKFSYRSCLSTEP---FSSYTTKRTSERLQDGRHIEENTDTRINR*YLNTHTDR 849
             ASKD G+ SYR  L +E    FSS T KR SER  +   +EE+ D R  R ++  H DR
Sbjct: 670  QASKDSGRSSYRGNLLSESHPTFSSLTAKRVSER-NERSSLEESNDAREARRFVAGHFDR 728

Query: 848  QYLDTPYKDPCFRDSQNNFILNFQRPLLRKHVTGWVSANSGNSFDDSQLAVGEMPSYMEG 669
            Q +DT Y+D  FR+S  + + NFQRPLLRK+V G +SA    SFDDSQL +G++ +Y++G
Sbjct: 729  QQMDTAYRDLTFRESNASHVPNFQRPLLRKNVGGRMSAGRRRSFDDSQLQIGDIANYVDG 788

Query: 668  PVSRSDALMEGLRSSSDWSARVSAFNYLRTLLQQGPKGVQEITE 537
            P S ++AL +GL SSSDW ARV+AFN+L+TLLQQGPKG QE+ +
Sbjct: 789  PASLNEALNDGLNSSSDWCARVAAFNFLQTLLQQGPKGAQEVIQ 832



 Score =  191 bits (485), Expect(3) = e-137
 Identities = 98/126 (77%), Positives = 111/126 (88%)
 Frame = -1

Query: 544  LQSFEKVMKLFFKHLDDPHHKVAQAALSTLAEMIPSCRKPFESYIERILPHVFSRLIDQK 365
            +QSFEKVMKLF +HLDDPHHKVAQAALSTLA++I SCRKPFESY+ER+LPHVFSRLID K
Sbjct: 831  IQSFEKVMKLFLRHLDDPHHKVAQAALSTLADLISSCRKPFESYMERVLPHVFSRLIDPK 890

Query: 364  ELVRQSFSTTLETVNKTYGIDSLLSALLRFLDDQRSLKAKLAVIEFAINSFNKNSTIFEG 185
            E+VRQ  S+TLE V+KTY +DSLL ALLR LD+QRS KAKLAVIEFAINSFN+ +   E 
Sbjct: 891  EVVRQPCSSTLEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEI 950

Query: 184  SGNSGI 167
            SGNSGI
Sbjct: 951  SGNSGI 956



 Score = 37.0 bits (84), Expect(3) = e-137
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -1

Query: 1711 KV*STARSCYRMFTKTWPELSR 1646
            +V +TAR CYRMF KTWP+ SR
Sbjct: 465  EVRATARMCYRMFAKTWPDRSR 486


>ref|NP_849997.2| CLIP-associated protein [Arabidopsis thaliana]
            gi|20259452|gb|AAM13846.1| unknown protein [Arabidopsis
            thaliana] gi|330251886|gb|AEC06980.1| CLIP-associated
            protein [Arabidopsis thaliana]
          Length = 1439

 Score =  307 bits (786), Expect(3) = e-137
 Identities = 177/339 (52%), Positives = 234/339 (69%), Gaps = 8/339 (2%)
 Frame = -3

Query: 1529 VINEERGGVHRRYASPSLRDRGGQSLHTPSQTPTCNVPGYGTSAIVAMDRSATLPSGTPL 1350
            +INEE GG+HRR+ASPS+R+R  Q   + +  P+ N+PGYGTSAIVAMDRS+ L SG  L
Sbjct: 499  LINEEDGGIHRRHASPSVRERHSQPSFSQTSAPS-NLPGYGTSAIVAMDRSSNLSSGGSL 557

Query: 1349 SSGLVLSQAKSLGKGTERSLESVLHASKQKVRSIESKLRGLDISDKP----LRSTSLDLG 1182
            SSGL+LSQ+K + KG+ERSLESVL +SKQKV +IES LRGL ISD+     LRS+SLDLG
Sbjct: 558  SSGLLLSQSKDVNKGSERSLESVLQSSKQKVSAIESMLRGLHISDRQNPAALRSSSLDLG 617

Query: 1181 VDTP*ARDPPFPLAAPSS-SHLMDSVLARFNCLQYF*SYKSEQWVNNIRSYQCSGSASKD 1005
            VD P +RDPPF   AP+S SH   +     + +    +      +++I +      ASKD
Sbjct: 618  VDPPSSRDPPFHAVAPASNSHTSSAAAESTHSINKGSNRNGGLGLSDIITQI---QASKD 674

Query: 1004 PGKFSYRSCLSTEP---FSSYTTKRTSERLQDGRHIEENTDTRINR*YLNTHTDRQYLDT 834
             G+ SYR  L +E    FSS T KR SER  +   +EE+ D R  R ++  H DRQ +DT
Sbjct: 675  SGRSSYRGNLLSESHPTFSSLTAKRGSER-NERSSLEESNDAREVRRFMAGHFDRQQMDT 733

Query: 833  PYKDPCFRDSQNNFILNFQRPLLRKHVTGWVSANSGNSFDDSQLAVGEMPSYMEGPVSRS 654
             Y+D  FR+S  + + NFQRPLLRK+V G +SA    SFDDSQL +G++ ++++GP S +
Sbjct: 734  AYRDLTFRESNASHVPNFQRPLLRKNVGGRMSAGRRRSFDDSQLQIGDISNFVDGPASLN 793

Query: 653  DALMEGLRSSSDWSARVSAFNYLRTLLQQGPKGVQEITE 537
            +AL +GL SSSDW ARV+AFN+L+TLLQQGPKG QE+ +
Sbjct: 794  EALNDGLNSSSDWCARVAAFNFLQTLLQQGPKGAQEVIQ 832



 Score =  194 bits (493), Expect(3) = e-137
 Identities = 99/126 (78%), Positives = 112/126 (88%)
 Frame = -1

Query: 544  LQSFEKVMKLFFKHLDDPHHKVAQAALSTLAEMIPSCRKPFESYIERILPHVFSRLIDQK 365
            +QSFEKVMKLF +HLDDPHHKVAQAALSTLA++IPSCRKPFESY+ER+LPHVFSRLID K
Sbjct: 831  IQSFEKVMKLFLRHLDDPHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPK 890

Query: 364  ELVRQSFSTTLETVNKTYGIDSLLSALLRFLDDQRSLKAKLAVIEFAINSFNKNSTIFEG 185
            E+VRQ  S+TLE V+KTY +DSLL ALLR LD+QRS KAKLAVIEFAINSFN+ +   E 
Sbjct: 891  EVVRQPCSSTLEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEI 950

Query: 184  SGNSGI 167
            SGNSGI
Sbjct: 951  SGNSGI 956



 Score = 37.0 bits (84), Expect(3) = e-137
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -1

Query: 1711 KV*STARSCYRMFTKTWPELSR 1646
            +V +TAR CYRMF KTWP+ SR
Sbjct: 465  EVRATARMCYRMFAKTWPDRSR 486


>dbj|BAE98846.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1031

 Score =  307 bits (786), Expect(3) = e-137
 Identities = 177/339 (52%), Positives = 234/339 (69%), Gaps = 8/339 (2%)
 Frame = -3

Query: 1529 VINEERGGVHRRYASPSLRDRGGQSLHTPSQTPTCNVPGYGTSAIVAMDRSATLPSGTPL 1350
            +INEE GG+HRR+ASPS+R+R  Q   + +  P+ N+PGYGTSAIVAMDRS+ L SG  L
Sbjct: 499  LINEEDGGIHRRHASPSVRERHSQPSFSQTSAPS-NLPGYGTSAIVAMDRSSNLSSGGSL 557

Query: 1349 SSGLVLSQAKSLGKGTERSLESVLHASKQKVRSIESKLRGLDISDKP----LRSTSLDLG 1182
            SSGL+LSQ+K + KG+ERSLESVL +SKQKV +IES LRGL ISD+     LRS+SLDLG
Sbjct: 558  SSGLLLSQSKDVNKGSERSLESVLQSSKQKVSAIESMLRGLHISDRQNPAALRSSSLDLG 617

Query: 1181 VDTP*ARDPPFPLAAPSS-SHLMDSVLARFNCLQYF*SYKSEQWVNNIRSYQCSGSASKD 1005
            VD P +RDPPF   AP+S SH   +     + +    +      +++I +      ASKD
Sbjct: 618  VDPPSSRDPPFHAVAPASNSHTSSAAAESTHSINKGSNRNGGLGLSDIITQI---QASKD 674

Query: 1004 PGKFSYRSCLSTEP---FSSYTTKRTSERLQDGRHIEENTDTRINR*YLNTHTDRQYLDT 834
             G+ SYR  L +E    FSS T KR SER  +   +EE+ D R  R ++  H DRQ +DT
Sbjct: 675  SGRSSYRGNLLSESHPTFSSLTAKRGSER-NERSSLEESNDAREVRRFMAGHFDRQQMDT 733

Query: 833  PYKDPCFRDSQNNFILNFQRPLLRKHVTGWVSANSGNSFDDSQLAVGEMPSYMEGPVSRS 654
             Y+D  FR+S  + + NFQRPLLRK+V G +SA    SFDDSQL +G++ ++++GP S +
Sbjct: 734  AYRDLTFRESNASHVPNFQRPLLRKNVGGRMSAGRRRSFDDSQLQIGDISNFVDGPASLN 793

Query: 653  DALMEGLRSSSDWSARVSAFNYLRTLLQQGPKGVQEITE 537
            +AL +GL SSSDW ARV+AFN+L+TLLQQGPKG QE+ +
Sbjct: 794  EALNDGLNSSSDWCARVAAFNFLQTLLQQGPKGAQEVIQ 832



 Score =  194 bits (493), Expect(3) = e-137
 Identities = 99/126 (78%), Positives = 112/126 (88%)
 Frame = -1

Query: 544  LQSFEKVMKLFFKHLDDPHHKVAQAALSTLAEMIPSCRKPFESYIERILPHVFSRLIDQK 365
            +QSFEKVMKLF +HLDDPHHKVAQAALSTLA++IPSCRKPFESY+ER+LPHVFSRLID K
Sbjct: 831  IQSFEKVMKLFLRHLDDPHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPK 890

Query: 364  ELVRQSFSTTLETVNKTYGIDSLLSALLRFLDDQRSLKAKLAVIEFAINSFNKNSTIFEG 185
            E+VRQ  S+TLE V+KTY +DSLL ALLR LD+QRS KAKLAVIEFAINSFN+ +   E 
Sbjct: 891  EVVRQPCSSTLEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEI 950

Query: 184  SGNSGI 167
            SGNSGI
Sbjct: 951  SGNSGI 956



 Score = 37.0 bits (84), Expect(3) = e-137
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -1

Query: 1711 KV*STARSCYRMFTKTWPELSR 1646
            +V +TAR CYRMF KTWP+ SR
Sbjct: 465  EVRATARMCYRMFAKTWPDRSR 486


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  367 bits (942), Expect(3) = e-104
 Identities = 205/350 (58%), Positives = 256/350 (73%), Gaps = 7/350 (2%)
 Frame = -3

Query: 1529 VINEERGGVHRRYASPSLRDRGGQSLHTPSQTPTCNVPGYGTSAIVAMDRSATLPSGTPL 1350
            +INEE GG+HRR+ASPSLR++  Q   TP QT   ++PGYGTSAIVAMDRS++LPSGT +
Sbjct: 499  IINEEDGGMHRRHASPSLREKSSQISFTP-QTSAPHLPGYGTSAIVAMDRSSSLPSGTSI 557

Query: 1349 SSGLVLSQAKSLGKGTERSLESVLHASKQKVRSIESKLRGLDISDK---PLRSTSLDLGV 1179
            SSGL+LSQAKS+GKGTERSLESVL ASKQKV +IES LRGL++SDK    LRS+SLDLGV
Sbjct: 558  SSGLLLSQAKSVGKGTERSLESVLQASKQKVTAIESMLRGLELSDKHNSSLRSSSLDLGV 617

Query: 1178 DTP*ARDPPFPLAAPSSSHLMDSVLARFNCLQYF*SYKSEQWVNNIRSYQCSGSASKDPG 999
            D P +RDPPFPLA P+S+ L ++ +   N         +      +        ASKDPG
Sbjct: 618  DPPSSRDPPFPLAVPASNQLTNTSMVESNASSIV-KGSNRNGGMALSDIITQIQASKDPG 676

Query: 998  KFSYRSCLSTEP---FSSYTTKRTSERLQDGRHIEENTDTRINR*YLNTHTDRQYLDTPY 828
            K SYRS +++EP   FSSY+ KR SERLQ+   +E+N++ R  R Y+N  +DRQY DTPY
Sbjct: 677  KLSYRSNMTSEPLSAFSSYSAKRVSERLQERGSLEDNSEIREARRYMNQQSDRQYSDTPY 736

Query: 827  KDPCFRDSQNNFILNFQRPLLRKHVTGWVSANSGNSFDDSQLAVGEMPSYMEGPVSRSDA 648
            KD  FRD  N++I NFQRPLLRK+V G +SA    SFDD+Q ++G+M SY +GP S +DA
Sbjct: 737  KDVNFRD--NSYIPNFQRPLLRKNVAGRMSAGRRRSFDDNQFSLGDMSSYEDGPTSLNDA 794

Query: 647  LMEGLRSSSDWSARVSAFNYLRTLLQQGPKGVQEITE-FREGYEVVFQTL 501
            L EGL  SSDWSARV+AFNYLR+LL QGPKGVQEI + F +  ++ FQ L
Sbjct: 795  LGEGLSPSSDWSARVAAFNYLRSLLHQGPKGVQEIMQSFEKVMKLFFQHL 844



 Score = 38.9 bits (89), Expect(3) = e-104
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = -1

Query: 1699 TARSCYRMFTKTWPELSRESILIF 1628
            TAR CYRMF KTWPE SR   + F
Sbjct: 469  TARMCYRMFAKTWPERSRRLFVCF 492



 Score = 22.3 bits (46), Expect(3) = e-104
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 1641 LFSSFDPIIQRV 1606
            LF  FDP+IQR+
Sbjct: 488  LFVCFDPVIQRI 499



 Score =  207 bits (528), Expect = 6e-51
 Identities = 110/153 (71%), Positives = 125/153 (81%)
 Frame = -1

Query: 556  VSKKLQSFEKVMKLFFKHLDDPHHKVAQAALSTLAEMIPSCRKPFESYIERILPHVFSRL 377
            V + +QSFEKVMKLFF+HLDDPHHKVAQAALSTLA++IPSCRKPFESY+ERILPHVFSRL
Sbjct: 826  VQEIMQSFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRL 885

Query: 376  IDQKELVRQSFSTTLETVNKTYGIDSLLSALLRFLDDQRSLKAKLAVIEFAINSFNKNST 197
            ID KELVRQ  STTLE V+KTYGIDSLL ALLR LD+QRS KAKLAVIEF+I+SFNK++ 
Sbjct: 886  IDPKELVRQPCSTTLEIVSKTYGIDSLLPALLRSLDEQRSPKAKLAVIEFSISSFNKHAL 945

Query: 196  IFEGSGNSGIXXXXXXXXXXXAHENLTVTKTSS 98
              EGSGNSGI           AH+  T  K ++
Sbjct: 946  NSEGSGNSGILKLWLAKLTPLAHDKNTKLKEAA 978


>ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|222844820|gb|EEE82367.1|
            predicted protein [Populus trichocarpa]
          Length = 1426

 Score =  365 bits (938), Expect(2) = e-104
 Identities = 203/351 (57%), Positives = 252/351 (71%), Gaps = 8/351 (2%)
 Frame = -3

Query: 1529 VINEERGGVHRRYASPSLRDRGGQSLHTPSQTPTCNVPGYGTSAIVAMDRSATLPSGTPL 1350
            ++NEE GG+HRR+ASPS+RDR  Q+  TP  +   +VPGYGTSAIVAMDR+++L SGT L
Sbjct: 499  IVNEEDGGLHRRHASPSIRDRSAQTSFTPQASAASHVPGYGTSAIVAMDRTSSLSSGTSL 558

Query: 1349 SSGLVLSQAKSLGKGTERSLESVLHASKQKVRSIESKLRGLDISDKP----LRSTSLDLG 1182
            SSGL+LSQAKSLGKGTERSLESVLHASKQKV +IES LRGL++SDK     LRS+SLDLG
Sbjct: 559  SSGLLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLELSDKQNPSALRSSSLDLG 618

Query: 1181 VDTP*ARDPPFPLAAPSSSHLMDSVLARFNCLQYF*SYKSEQWVNNIRSYQCSGSASKDP 1002
            VD P +RDPPFP + P+S+HL +S+ A  +         +      +        ASKD 
Sbjct: 619  VDPPSSRDPPFPASVPASNHLTNSLTAE-STASGIGKGSNRNGGLVLSDIITQIQASKDS 677

Query: 1001 GKFSYRSCLSTEP---FSSYTTKRTSERLQDGRHIEENTDTRINR*YLNTHTDRQYLDTP 831
             K SYR+ ++ E    FSSY+TKR SER      +EE+ D R  R + N H DRQY+DTP
Sbjct: 678  AKLSYRNNMAAESLPTFSSYSTKRISER----GSVEEDNDIREPRRFANPHVDRQYMDTP 733

Query: 830  YKDPCFRDSQNNFILNFQRPLLRKHVTGWVSANSGNSFDDSQLAVGEMPSYMEGPVSRSD 651
            YKD  +RDS ++ I NFQRPLLRKHV G +SA    SFDDSQL++GE+ SY+EGP S SD
Sbjct: 734  YKDLNYRDSHSSHIPNFQRPLLRKHVAGRMSAGRRKSFDDSQLSLGEVSSYVEGPASLSD 793

Query: 650  ALMEGLRSSSDWSARVSAFNYLRTLLQQGPKGVQEITE-FREGYEVVFQTL 501
            AL EGL  SSDW+ARV+AFNYL +LLQQGPKGVQE+ + F +  ++ FQ L
Sbjct: 794  ALSEGLSPSSDWNARVAAFNYLHSLLQQGPKGVQEVIQNFEKVMKLFFQHL 844



 Score = 40.8 bits (94), Expect(2) = e-104
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -1

Query: 1711 KV*STARSCYRMFTKTWPELSRESILIF 1628
            +V STAR CYRMF KTWPE SR   + F
Sbjct: 465  EVRSTARMCYRMFAKTWPERSRRLFMSF 492



 Score =  203 bits (517), Expect = 1e-49
 Identities = 105/153 (68%), Positives = 123/153 (80%)
 Frame = -1

Query: 556  VSKKLQSFEKVMKLFFKHLDDPHHKVAQAALSTLAEMIPSCRKPFESYIERILPHVFSRL 377
            V + +Q+FEKVMKLFF+HLDDPHHKVAQAALSTLA++IPSCRKPFESY+ERILPHVFSRL
Sbjct: 826  VQEVIQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRL 885

Query: 376  IDQKELVRQSFSTTLETVNKTYGIDSLLSALLRFLDDQRSLKAKLAVIEFAINSFNKNST 197
            ID KELVRQ  STTLE V+KTYG+D LL ALLR LD+QRS KAKLAVIEFA++SFNK++ 
Sbjct: 886  IDPKELVRQPCSTTLEIVSKTYGVDILLPALLRSLDEQRSPKAKLAVIEFALSSFNKHAM 945

Query: 196  IFEGSGNSGIXXXXXXXXXXXAHENLTVTKTSS 98
              EGSGN+GI            H+  T  K ++
Sbjct: 946  NSEGSGNTGILKLWLAKLTPLVHDKNTKLKEAA 978