BLASTX nr result
ID: Coptis25_contig00001188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001188
(4069 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1... 780 0.0
ref|XP_002513846.1| serine hydroxymethyltransferase, putative [R... 777 0.0
ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1... 762 0.0
ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1... 759 0.0
ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1... 754 0.0
>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 577
Score = 780 bits (2014), Expect = 0.0
Identities = 403/597 (67%), Positives = 443/597 (74%), Gaps = 3/597 (0%)
Frame = +1
Query: 1777 MDSNLSLAICSNISSSPRTPLADDSISLXXXXXXXXXXXXXXMPPLQFLEPNSNNNQRDE 1956
MD N S + SSS +ADDSI+ PLQ LE N R E
Sbjct: 1 MDLNSSSNLSLGFSSSSSVQIADDSIAFQIDSSFRESTNPMPTAPLQLLE----ENHRGE 56
Query: 1957 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHPMCLKRRKMDGDXXXXXXXXXNKRCM 2136
+ GH MCLKRR+ DG+ +R
Sbjct: 57 NGGGGGESADEEEKVEEFRIL-----------GHSMCLKRRR-DGEVTCSAV----RRDP 100
Query: 2137 MTMESLESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAVMEAL 2316
M E LE+RRSAVRAW NQ LC+ADP + +IMEKEK RQ KGIELIASENFVCRAVMEAL
Sbjct: 101 MEAE-LEARRSAVRAWGNQRLCVADPDVFDIMEKEKRRQFKGIELIASENFVCRAVMEAL 159
Query: 2317 GSHLTNKYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCTSANF 2496
GSHLTNKYSEGMPGARYY GNQ+ID+IE LCC RAL+AF LD + WGVNVQPYSCTSANF
Sbjct: 160 GSHLTNKYSEGMPGARYYCGNQYIDEIEWLCCKRALKAFDLDPENWGVNVQPYSCTSANF 219
Query: 2497 AVYTGLLLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGYIDYD 2676
AVYTGLLLP DRIMGLDT SGG+ SHGYYT +G+KVSGASIFFE+LPYKVNP TGYID+D
Sbjct: 220 AVYTGLLLPGDRIMGLDTPSGGNTSHGYYTPNGRKVSGASIFFESLPYKVNPQTGYIDFD 279
Query: 2677 KLEDTALVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKACISP 2856
KLE+ AL +RPKILICGGSSYPREWDYARFRQIADKCGAVL+CDMA ISGLVAAK C++P
Sbjct: 280 KLEERALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLLCDMAQISGLVAAKECVNP 339
Query: 2857 FDYCDVVTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFAVFPS 3036
FDYCD+VTSTTHKSLRGPRGGI+FYRKG KPRKRG + S GD+ D YD+EE+INFAVFPS
Sbjct: 340 FDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPRKRGMILSQGDDNDHYDYEEKINFAVFPS 399
Query: 3037 LQGGPHNNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTDNHLV 3216
LQGGPHNNH KQVA PEY AYM QVKKN VTGGTDNHL+
Sbjct: 400 LQGGPHNNHIAALAIALKQVATPEYKAYMLQVKKNAQALASALLRRKCRLVTGGTDNHLL 459
Query: 3217 LWDLRNFGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLEADFE 3387
LWDLR GLTGKNYEKVCE+C+ITLNK AIFGDNG I GVRIGTPAMTSRGCLEADFE
Sbjct: 460 LWDLRTLGLTGKNYEKVCEMCHITLNKIAIFGDNGTITPGGVRIGTPAMTSRGCLEADFE 519
Query: 3388 TIADFLLRVAQIACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMPAFD 3558
TIADFLLR AQIA VVQREHG +QK FLKGL++NKD+V+LR RVE FA+ F MP FD
Sbjct: 520 TIADFLLRAAQIASVVQREHGKMQKAFLKGLESNKDIVELRTRVEIFATQFVMPGFD 576
>ref|XP_002513846.1| serine hydroxymethyltransferase, putative [Ricinus communis]
gi|223546932|gb|EEF48429.1| serine
hydroxymethyltransferase, putative [Ricinus communis]
Length = 567
Score = 777 bits (2007), Expect = 0.0
Identities = 383/508 (75%), Positives = 416/508 (81%), Gaps = 6/508 (1%)
Frame = +1
Query: 2053 GHPMCLKRRKM-DGDXXXXXXXXXN--KRCMMTMESLESRRSAVRAWSNQPLCIADPVIH 2223
GHPMCLKR++ DG N KR + LESRR+ VRAW NQPL ADP IH
Sbjct: 59 GHPMCLKRQRGGDGQSSSSSSSSPNPSKRTAIEPPGLESRRAMVRAWGNQPLPFADPEIH 118
Query: 2224 EIMEKEKHRQVKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYGGNQFIDQIEL 2403
EIMEKEK RQ+KGIELIASENFVCRAVMEALGSHLTNKYSEG+PG+RYY GNQ IDQIE
Sbjct: 119 EIMEKEKQRQIKGIELIASENFVCRAVMEALGSHLTNKYSEGLPGSRYYTGNQLIDQIES 178
Query: 2404 LCCSRALEAFHLDSDKWGVNVQPYSCTSANFAVYTGLLLPKDRIMGLDTLSGGHLSHGYY 2583
+CC+RAL AF LDSDKWGVNVQPYSCTSANFAVYTGLLLP DRIMGLD+ SGGHLSHGY
Sbjct: 179 ICCNRALVAFGLDSDKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYC 238
Query: 2584 TASGKKVSGASIFFETLPYKVNPHTGYIDYDKLEDTALVYRPKILICGGSSYPREWDYAR 2763
GKKVS +SIFFE+LPYKVNP TGYIDYDK+E+ A+ +RPKILICGGSSYPREWDYAR
Sbjct: 239 VPGGKKVSASSIFFESLPYKVNPQTGYIDYDKMEEKAMDFRPKILICGGSSYPREWDYAR 298
Query: 2764 FRQIADKCGAVLMCDMAHISGLVAAKACISPFDYCDVVTSTTHKSLRGPRGGIVFYRKGL 2943
FRQ+ADK GAVLMCDMAHISGLVAAK C SPFDYCDVVTSTTHKSLRGPRGGI+F+RKG
Sbjct: 299 FRQVADKIGAVLMCDMAHISGLVAAKECASPFDYCDVVTSTTHKSLRGPRGGIIFFRKGQ 358
Query: 2944 KPRKRGTLSSHGDEYDRYDFEERINFAVFPSLQGGPHNNHXXXXXXXXKQVAAPEYHAYM 3123
K RK+G L +HGD YDFEERINFAV PSLQGGPHNNH KQVA+PEY YM
Sbjct: 359 KSRKQGNLLNHGDSSSHYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVASPEYRTYM 418
Query: 3124 QQVKKNXXXXXXXXXXXXXXXVTGGTDNHLVLWDLRNFGLTGKNYEKVCEICYITLNKSA 3303
QQVKKN VTGGTDNHL+LWDL GL GKNYEKVCE+C+ITLNKSA
Sbjct: 419 QQVKKNARTLASALLRRKCRLVTGGTDNHLLLWDLTTLGLAGKNYEKVCEMCHITLNKSA 478
Query: 3304 IFGDNGAI---GVRIGTPAMTSRGCLEADFETIADFLLRVAQIACVVQREHGNLQKDFLK 3474
IFG+NGAI GVRIGTPAMTSRGCLE DFETIADFLLR AQIAC +QREHG +QK+FLK
Sbjct: 479 IFGENGAICLGGVRIGTPAMTSRGCLEGDFETIADFLLRAAQIACAIQREHGKIQKEFLK 538
Query: 3475 GLQANKDVVDLRNRVESFASLFAMPAFD 3558
GLQ N+D+V+LRNRVE+FAS FAMP FD
Sbjct: 539 GLQNNRDIVELRNRVETFASQFAMPGFD 566
>ref|XP_003540162.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
Length = 563
Score = 762 bits (1967), Expect = 0.0
Identities = 391/596 (65%), Positives = 439/596 (73%), Gaps = 3/596 (0%)
Frame = +1
Query: 1783 SNLSLAICSNISSSPRTPLADDSISLXXXXXXXXXXXXXXMPPLQFLEPNSNNNQRDEDX 1962
SNLSL S+ +S P P +D + PLQ +EP + N D +
Sbjct: 8 SNLSLGFSSSHASPP--PRSDPPV------------------PLQLMEPQTENGNLDVES 47
Query: 1963 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHPMCLKRRKMDGDXXXXXXXXXNKRCMMT 2142
GH MCLKRR+ D KR +
Sbjct: 48 DDDEDKEVEEFRIL----------------GHSMCLKRRR---DCDSSSSSSAAKRVSVE 88
Query: 2143 MESLESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAVMEALGS 2322
+ L++R++AVRAW QPL IADP +HEIMEKEK RQ +GIELIASENFVCRAVMEALGS
Sbjct: 89 PD-LDARKAAVRAWGCQPLSIADPDVHEIMEKEKKRQFRGIELIASENFVCRAVMEALGS 147
Query: 2323 HLTNKYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCTSANFAV 2502
HLTNKYSEGMPGARYYGGNQ+ID+IE LCC RAL AF LD WGVNVQPYSCTSANFAV
Sbjct: 148 HLTNKYSEGMPGARYYGGNQYIDEIETLCCERALNAFGLDPKCWGVNVQPYSCTSANFAV 207
Query: 2503 YTGLLLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGYIDYDKL 2682
YTGLLLP DRIMGLDT SGG+ SHGYYT +GKKVSGASIFFE+LPYKVNP TGYIDYDKL
Sbjct: 208 YTGLLLPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYIDYDKL 267
Query: 2683 EDTALVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKACISPFD 2862
E+ AL +RPKILICGGSSYPREWDYARFR IADKCGAVL+CDMA ISG++AAK C++PFD
Sbjct: 268 EERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGIIAAKECVNPFD 327
Query: 2863 YCDVVTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFAVFPSLQ 3042
YCD+VTSTTHKSLRGPRGGI+FYRKG KPRKRG L S G E D+YDFEE+INFAVFPS+Q
Sbjct: 328 YCDIVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGHESDQYDFEEKINFAVFPSMQ 387
Query: 3043 GGPHNNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTDNHLVLW 3222
GGPHNNH KQVA PEY AYMQQVKKN VTGGTDNHL+LW
Sbjct: 388 GGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALACALLRRKCRLVTGGTDNHLILW 447
Query: 3223 DLRNFGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLEADFETI 3393
DLR GLTGK YEKVCE C+ITLNK AIFGDNG I GVR+GTPAMTSRGCLEA FET+
Sbjct: 448 DLRPLGLTGKFYEKVCETCHITLNKIAIFGDNGTIIPGGVRVGTPAMTSRGCLEAHFETM 507
Query: 3394 ADFLLRVAQIACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMPAFDV 3561
A+FL+R AQIA ++QREHG LQK LKGL++N+DVV+LR RVE+FA+ FAMP FD+
Sbjct: 508 AEFLIRAAQIASILQREHGKLQKTTLKGLESNRDVVELRARVEAFATQFAMPGFDI 563
>ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 584
Score = 759 bits (1959), Expect = 0.0
Identities = 395/604 (65%), Positives = 438/604 (72%), Gaps = 11/604 (1%)
Frame = +1
Query: 1783 SNLSLAICSNISSSPRTPLADDSISLXXXXXXXXXXXXXXMPPLQFLEP------NSNNN 1944
S LSL S+ S +P TPLADDS+ L PLQ E N +
Sbjct: 8 SGLSLGFHSHSSLAPMTPLADDSVKLQIASDFSSLGNPIQSVPLQLFEQRCEKFSNGSGG 67
Query: 1945 QRDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHPMCLKRRKMDGDXXXXXXXXXN 2124
Q ++ GHPMCLKR + D +
Sbjct: 68 QSEDGEDEEFHIL-----------------------GHPMCLKRPR---DEQFSRSSSPS 101
Query: 2125 KRCMMTMESLESRRSAVRAWSNQPLCIADPVIHEIMEKEKHRQVKGIELIASENFVCRAV 2304
K ++ LE RR AVRAW NQPL +ADP + +IMEKEK RQ KGIELIASENFVCRAV
Sbjct: 102 KVALVE-SGLEQRRVAVRAWGNQPLSVADPDVFQIMEKEKKRQFKGIELIASENFVCRAV 160
Query: 2305 MEALGSHLTNKYSEGMPGARYYGGNQFIDQIELLCCSRALEAFHLDSDKWGVNVQPYSCT 2484
MEALGSHLTNKYSEGMPGARYY GN +IDQIELLCC RAL AFHLDS+KWGVNVQPYSCT
Sbjct: 161 MEALGSHLTNKYSEGMPGARYYTGNDYIDQIELLCCRRALAAFHLDSEKWGVNVQPYSCT 220
Query: 2485 SANFAVYTGLLLPKDRIMGLDTLSGGHLSHGYYTASGKKVSGASIFFETLPYKVNPHTGY 2664
SANFAVYTGLLLPKDRIMGLD+ SGGHLSHGYY SGKKVSG SIFFE+LPYKVNP TGY
Sbjct: 221 SANFAVYTGLLLPKDRIMGLDSPSGGHLSHGYYMPSGKKVSGTSIFFESLPYKVNPQTGY 280
Query: 2665 IDYDKLEDTALVYRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKA 2844
IDYDKLE+ AL +RPKILICGGSSYPREW+YARFRQIADKCGAVLMCDMA ISG+VAAK
Sbjct: 281 IDYDKLEEKALDFRPKILICGGSSYPREWNYARFRQIADKCGAVLMCDMAQISGIVAAKE 340
Query: 2845 CISPFDYCDVVTSTTHKSLRGPRGGIVFYRKGLKPRKRGTLSSHGDEYDRYDFEERINFA 3024
C SPFDYCD+VTSTTHK+LRGPRGGI+FYRKG K RK G L S GD+ ++YDFEERINFA
Sbjct: 341 CASPFDYCDIVTSTTHKNLRGPRGGIIFYRKGAKARKPGMLLSQGDDSNQYDFEERINFA 400
Query: 3025 VFPSLQGGPHNNHXXXXXXXXKQVAAPEYHAYMQQVKKNXXXXXXXXXXXXXXXVTGGTD 3204
VFPSLQGGPHNNH KQVA PEY AYMQQVKKN VT GTD
Sbjct: 401 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALAAALLRKSCKLVTEGTD 460
Query: 3205 NHLVLWDLRNFGLTGKNYEKVCEICYITLNKSAIFGDNGAI---GVRIGTPAMTSRGCLE 3375
NHL+LWDL + +TGKNYEKVCE+C+ITLNK+AI+GDNGAI GVRIG+PAMT+RGCLE
Sbjct: 461 NHLLLWDLTDLHITGKNYEKVCELCHITLNKTAIYGDNGAISPGGVRIGSPAMTTRGCLE 520
Query: 3376 ADFETIADFLLRVAQI--ACVVQREHGNLQKDFLKGLQANKDVVDLRNRVESFASLFAMP 3549
ADFETIA+FL R A I A V QRE +DF K LQ NKD+V+LRN+VE+FAS FAMP
Sbjct: 521 ADFETIAEFLYRAAVITSAVVTQRELRKFPRDFFKCLQNNKDIVELRNQVETFASQFAMP 580
Query: 3550 AFDV 3561
FD+
Sbjct: 581 GFDI 584
>ref|XP_003532992.1| PREDICTED: serine hydroxymethyltransferase 1-like [Glycine max]
Length = 566
Score = 754 bits (1948), Expect = 0.0
Identities = 369/506 (72%), Positives = 412/506 (81%), Gaps = 3/506 (0%)
Frame = +1
Query: 2053 GHPMCLKRRKMDGDXXXXXXXXXNKRCMMTMESLESRRSAVRAWSNQPLCIADPVIHEIM 2232
GH MCLKRR+ D + + L++R++AVRAW QPL IADP IHEIM
Sbjct: 64 GHSMCLKRRR---DCDSSSSSAAAAKRVSVEPDLDARKAAVRAWGCQPLSIADPDIHEIM 120
Query: 2233 EKEKHRQVKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYGGNQFIDQIELLCC 2412
EKEK RQ GIELIASENFVCRAVMEALGSHLTNKYSEGMPG+RYYGGNQ+ID+IE LCC
Sbjct: 121 EKEKKRQFCGIELIASENFVCRAVMEALGSHLTNKYSEGMPGSRYYGGNQYIDEIETLCC 180
Query: 2413 SRALEAFHLDSDKWGVNVQPYSCTSANFAVYTGLLLPKDRIMGLDTLSGGHLSHGYYTAS 2592
RAL AF LD WGVNVQPYSCTSANF+VYTGLLLP DRIMGLDT SGG+ SHGYYT +
Sbjct: 181 ERALNAFGLDPKCWGVNVQPYSCTSANFSVYTGLLLPGDRIMGLDTPSGGNTSHGYYTPN 240
Query: 2593 GKKVSGASIFFETLPYKVNPHTGYIDYDKLEDTALVYRPKILICGGSSYPREWDYARFRQ 2772
GKKVSGASIFFE+LPYKVNP TGYIDYDKLE+ AL +RPKILICGGSSYPREWDYARFR
Sbjct: 241 GKKVSGASIFFESLPYKVNPQTGYIDYDKLEERALDFRPKILICGGSSYPREWDYARFRH 300
Query: 2773 IADKCGAVLMCDMAHISGLVAAKACISPFDYCDVVTSTTHKSLRGPRGGIVFYRKGLKPR 2952
IADKCGAVL+CDMA ISG++AAK C++PFDYCD+VTSTTHKSLRGPRGGI+FYRKG KPR
Sbjct: 301 IADKCGAVLLCDMAQISGIIAAKECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGTKPR 360
Query: 2953 KRGTLSSHGDEYDRYDFEERINFAVFPSLQGGPHNNHXXXXXXXXKQVAAPEYHAYMQQV 3132
RG L S G E D+YDFEE+INFAVFPS+QGGPHNNH KQVA PEY AYMQQV
Sbjct: 361 NRGILLSQGHESDQYDFEEKINFAVFPSMQGGPHNNHIAALAIALKQVATPEYKAYMQQV 420
Query: 3133 KKNXXXXXXXXXXXXXXXVTGGTDNHLVLWDLRNFGLTGKNYEKVCEICYITLNKSAIFG 3312
KKN VTGGTDNHL+LWDLR GLTGK YEKVCE C+ITLNK AIFG
Sbjct: 421 KKNAQALACALLRRKCRLVTGGTDNHLILWDLRPLGLTGKFYEKVCETCHITLNKIAIFG 480
Query: 3313 DNGAI---GVRIGTPAMTSRGCLEADFETIADFLLRVAQIACVVQREHGNLQKDFLKGLQ 3483
DNG I GVR+GTPAMTSRGCLEADFET+A+FL+R AQIA ++QREHG LQK LKGL+
Sbjct: 481 DNGTIIPGGVRVGTPAMTSRGCLEADFETMAEFLIRAAQIASILQREHGKLQKTTLKGLE 540
Query: 3484 ANKDVVDLRNRVESFASLFAMPAFDV 3561
+++D+V+LR RVE+FA+ FAMP FD+
Sbjct: 541 SHRDIVELRARVEAFATQFAMPGFDI 566