BLASTX nr result

ID: Coptis25_contig00001182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001182
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera]    65   2e-08
ref|XP_002510383.1| ATP binding protein, putative [Ricinus commu...    65   2e-08
ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 ...    65   2e-08
ref|XP_002301867.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08

>emb|CAN75692.1| hypothetical protein VITISV_038533 [Vitis vinifera]
          Length = 1762

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
 Frame = +2

Query: 302 IARFSRQVKRPHGLCVKMSAVAALGLCFIFMLXXXXXXXXXXXXXXXXXXDITEPVAAN- 478
           +ARF RQ KRP+G+CVKM+AVA LG+CFIF+                   DI EPV  + 
Sbjct: 529 LARFGRQAKRPYGVCVKMTAVAVLGMCFIFVWSMFSASPSAVTSQRSSFGDINEPVPGST 588

Query: 479 ---------EKREKGKTVVKQLPKEKKVEPHLREKDKTKGEGA 580
                    +K E  KT +     + K E  L EKD+ K +G+
Sbjct: 589 GVGSSRTGLKKNEPEKTELSGGSNKVKFESDLEEKDEKKLDGS 631


>ref|XP_002510383.1| ATP binding protein, putative [Ricinus communis]
           gi|223551084|gb|EEF52570.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 735

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 34/91 (37%), Positives = 46/91 (50%)
 Frame = +2

Query: 302 IARFSRQVKRPHGLCVKMSAVAALGLCFIFMLXXXXXXXXXXXXXXXXXXDITEPVAANE 481
           IARF+R  KRP+G C KM+AVA +GLCFIF+                   DI EPV  N+
Sbjct: 3   IARFARHAKRPYGFCAKMTAVAVMGLCFIFVWSLFSASSSSVTTQRESFDDIAEPVPGNQ 62

Query: 482 KREKGKTVVKQLPKEKKVEPHLREKDKTKGE 574
           K    KT  K++  +K       +K K + +
Sbjct: 63  KVSSSKTQSKEIEPQKHKSGREDQKVKVQSD 93


>ref|XP_002281457.1| PREDICTED: probable methyltransferase PMT28 [Vitis vinifera]
           gi|302142491|emb|CBI19694.3| unnamed protein product
           [Vitis vinifera]
          Length = 724

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
 Frame = +2

Query: 302 IARFSRQVKRPHGLCVKMSAVAALGLCFIFMLXXXXXXXXXXXXXXXXXXDITEPVAAN- 478
           +ARF RQ KRP+G+CVKM+AVA LG+CFIF+                   DI EPV  + 
Sbjct: 3   LARFGRQAKRPYGVCVKMTAVAVLGMCFIFVWSMFSASPSAVTSQRSSFGDINEPVPGST 62

Query: 479 ---------EKREKGKTVVKQLPKEKKVEPHLREKDKTKGEGA 580
                    +K E  KT +     + K E  L EKD+ K +G+
Sbjct: 63  GVGSSRTGLKKNEPEKTELSGGRNKVKFESDLEEKDEKKLDGS 105


>ref|XP_002301867.1| predicted protein [Populus trichocarpa] gi|222843593|gb|EEE81140.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 34/91 (37%), Positives = 45/91 (49%)
 Frame = +2

Query: 302 IARFSRQVKRPHGLCVKMSAVAALGLCFIFMLXXXXXXXXXXXXXXXXXXDITEPVAANE 481
           IAR +RQ KRP G CVKM+AVA +G CFIF+                   DI EPVA N 
Sbjct: 3   IARLARQAKRPRGFCVKMTAVAVMGFCFIFVWSMFSSSSTSATTQRESFDDIAEPVAGNT 62

Query: 482 KREKGKTVVKQLPKEKKVEPHLREKDKTKGE 574
           +  +  T  ++  KEK     + EK   + +
Sbjct: 63  RVSRPHTQSREREKEKHEPSRVNEKQNGESD 93


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