BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001170
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT76903.1| IAA type protein [Elaeis guineensis]                    81   2e-27
ref|XP_002284861.1| PREDICTED: auxin-responsive protein IAA7-lik...    72   1e-23
emb|CBI28126.3| unnamed protein product [Vitis vinifera]               72   1e-23
emb|CAD30274.1| IAA16 protein [Gossypium hirsutum]                     75   1e-23
ref|XP_002299625.1| predicted protein [Populus trichocarpa] gi|1...    70   1e-23

>gb|AAT76903.1| IAA type protein [Elaeis guineensis]
          Length = 211

 Score = 80.9 bits (198), Expect(2) = 2e-27
 Identities = 35/44 (79%), Positives = 41/44 (93%)
 Frame = +1

Query: 424 KKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCFTIR 555
           K CTYVKVAVDGAPYLRKVDLEM+GGY Q L+A+E+MF+CFT+R
Sbjct: 99  KSCTYVKVAVDGAPYLRKVDLEMYGGYQQFLTAIEDMFSCFTVR 142



 Score = 67.0 bits (162), Expect(2) = 2e-27
 Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = +3

Query: 84  ETELTLGLPGDTRIIHEGKSCAKRGFSQTVDLKLGCKEPTDDHSD--TDEVTSSVGKFPP 257
           ETEL LGLPG +R     ++  KRGF++TVDL LG +  + D  D  T +  S  GK PP
Sbjct: 21  ETELKLGLPGGSRTAGS-ETEKKRGFAETVDLSLGAESRSGDLGDRSTGDFGSGAGK-PP 78

Query: 258 APKTQVVALGWPPVRSTRRN 317
           A K QVV  GWPPVRS R+N
Sbjct: 79  AVKAQVV--GWPPVRSFRKN 96


>ref|XP_002284861.1| PREDICTED: auxin-responsive protein IAA7-like [Vitis vinifera]
          Length = 224

 Score = 72.0 bits (175), Expect(2) = 1e-23
 Identities = 34/43 (79%), Positives = 35/43 (81%)
 Frame = +1

Query: 424 KKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCFTI 552
           K C YVKVAVDGAPYLRKVDLE+H  Y QLL ALE MF CFTI
Sbjct: 112 KSCKYVKVAVDGAPYLRKVDLEVHRSYQQLLMALETMFDCFTI 154



 Score = 63.2 bits (152), Expect(2) = 1e-23
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = +3

Query: 84  ETELTLGLPGDTRI-IHEGKSCAKRGFSQTVDLKLGC--KEPTDDHSDTDEVTSSVGKFP 254
           +TELTLGLPG+ ++ I  GKSC+KRG+S TVD +  C   E +      D     +    
Sbjct: 29  DTELTLGLPGEAQVVIVGGKSCSKRGYSDTVDFRFRCCSGESSAKAEKVDWPGKEISGPG 88

Query: 255 PAPKTQVVALGWPPVRSTRR 314
            AP ++   +GWPPVRS R+
Sbjct: 89  KAPDSKAQVVGWPPVRSVRK 108


>emb|CBI28126.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score = 72.0 bits (175), Expect(2) = 1e-23
 Identities = 34/43 (79%), Positives = 35/43 (81%)
 Frame = +1

Query: 424 KKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCFTI 552
           K C YVKVAVDGAPYLRKVDLE+H  Y QLL ALE MF CFTI
Sbjct: 104 KSCKYVKVAVDGAPYLRKVDLEVHRSYQQLLMALETMFDCFTI 146



 Score = 63.2 bits (152), Expect(2) = 1e-23
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = +3

Query: 84  ETELTLGLPGDTRI-IHEGKSCAKRGFSQTVDLKLGC--KEPTDDHSDTDEVTSSVGKFP 254
           +TELTLGLPG+ ++ I  GKSC+KRG+S TVD +  C   E +      D     +    
Sbjct: 21  DTELTLGLPGEAQVVIVGGKSCSKRGYSDTVDFRFRCCSGESSAKAEKVDWPGKEISGPG 80

Query: 255 PAPKTQVVALGWPPVRSTRR 314
            AP ++   +GWPPVRS R+
Sbjct: 81  KAPDSKAQVVGWPPVRSVRK 100


>emb|CAD30274.1| IAA16 protein [Gossypium hirsutum]
          Length = 208

 Score = 74.7 bits (182), Expect(2) = 1e-23
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +1

Query: 421 RKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCFTIR 555
           +K C YVKVAVDGAPYLRKVDLE++  Y QLL++LE+MF+CFTIR
Sbjct: 96  KKSCKYVKVAVDGAPYLRKVDLEIYNSYQQLLTSLEDMFSCFTIR 140



 Score = 60.5 bits (145), Expect(2) = 1e-23
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = +3

Query: 87  TELTLGLPGDTRIIHEG--KSCAKRGFSQTVDLKLGCKEPTDDHSDTDEVTSSVGKFPPA 260
           TELTLGLPG+ R+  +G  K  +KRGFS+TVDLKLG      D++   ++  S+ +   +
Sbjct: 22  TELTLGLPGEPRVTSDGGAKLGSKRGFSETVDLKLG------DNNQEVKLGHSLQEAAKS 75

Query: 261 PKTQVVALGWPPVRSTRRNLPRKKC 335
           P ++   +GWPPVR   +   +K C
Sbjct: 76  PVSKTQVVGWPPVRGFAKR-GKKSC 99


>ref|XP_002299625.1| predicted protein [Populus trichocarpa] gi|118485628|gb|ABK94664.1|
           unknown [Populus trichocarpa]
           gi|222846883|gb|EEE84430.1| predicted protein [Populus
           trichocarpa]
          Length = 220

 Score = 70.5 bits (171), Expect(2) = 1e-23
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = +1

Query: 424 KKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCFT 549
           K C YVKVAVDGAPYLRKVDLEM+  Y QLL+AL++MF+CF+
Sbjct: 104 KSCKYVKVAVDGAPYLRKVDLEMYNSYQQLLNALQDMFSCFS 145



 Score = 64.3 bits (155), Expect(2) = 1e-23
 Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
 Frame = +3

Query: 84  ETELTLGLPGDTR-IIHEGKSCAKRGFSQTVDLKLGCKEPTD-DH------SDTDEVTSS 239
           ETELTLGLPG++R +    K+  KRGF +TVDL LG     D DH      S+TD   ++
Sbjct: 21  ETELTLGLPGESRGLALIEKTSGKRGFLETVDLNLGRSSNVDSDHNKYSGESETDVPNTA 80

Query: 240 VGKFPPAPKTQVVALGWPPVRSTRRN 317
               PPA K QVV  GWPPVR+ R+N
Sbjct: 81  K---PPAAKAQVV--GWPPVRAYRKN 101