BLASTX nr result

ID: Coptis25_contig00001169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001169
         (1349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72026.1| hypothetical protein VITISV_014421 [Vitis vinifera]   204   2e-64
ref|XP_002264963.1| PREDICTED: auxin-induced protein AUX28 [Viti...   203   5e-64
emb|CBI35213.3| unnamed protein product [Vitis vinifera]              203   6e-64
ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ri...   204   3e-61
ref|XP_003521268.1| PREDICTED: auxin-induced protein AUX28-like ...   196   3e-61

>emb|CAN72026.1| hypothetical protein VITISV_014421 [Vitis vinifera]
          Length = 285

 Score =  204 bits (520), Expect(2) = 2e-64
 Identities = 97/115 (84%), Positives = 106/115 (92%)
 Frame = -1

Query: 737 VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNESKLMDLLN 558
           VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCG+QGMKDFMNESKL+DLLN
Sbjct: 123 VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLN 182

Query: 557 GTEYVPTYEDKDGDWMLVGDVPWNMFITSCKRLRIMKGSEARGLGYAA*RTDERE 393
           G++YVPTYEDKDGDWMLVGDVPW MF+ SCKRLRIMKGSEA GL  ++    E++
Sbjct: 183 GSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAKSSGEVQEQK 237



 Score = 68.9 bits (167), Expect(2) = 2e-64
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -3

Query: 924 QVVGWPPVRSFRKNILSVQKSNTKEDTGMSSAAFVKVSMDG 802
           QVVGWPPVRSFRKNIL+VQK++++E+   SSAAFVKVSMDG
Sbjct: 89  QVVGWPPVRSFRKNILTVQKNSSEEEKASSSAAFVKVSMDG 129



 Score = 56.2 bits (134), Expect(3) = 5e-08
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 381 DVPWEMFVDSCKRLRIMKGSEAIGLAPRAVE 289
           DVPWEMFV+SCKRLRIMKGSEAIGLA  + E
Sbjct: 202 DVPWEMFVESCKRLRIMKGSEAIGLAKSSGE 232



 Score = 27.3 bits (59), Expect(3) = 5e-08
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 167 WVCLYYGFIYRYKKK 123
           W+CLY G IY+Y+++
Sbjct: 259 WMCLYGGMIYKYERE 273



 Score = 20.4 bits (41), Expect(3) = 5e-08
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 301 QSCGEMQEQKLK 266
           +S GE+QEQKL+
Sbjct: 228 KSSGEVQEQKLE 239


>ref|XP_002264963.1| PREDICTED: auxin-induced protein AUX28 [Vitis vinifera]
           gi|313765827|gb|ADR80321.1| indole-3-acetic acid-induced
           protein 16 [Vitis vinifera]
          Length = 238

 Score =  203 bits (517), Expect(2) = 5e-64
 Identities = 96/104 (92%), Positives = 101/104 (97%)
 Frame = -1

Query: 737 VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNESKLMDLLN 558
           VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCG+QGMKDFMNESKL+DLLN
Sbjct: 123 VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLN 182

Query: 557 GTEYVPTYEDKDGDWMLVGDVPWNMFITSCKRLRIMKGSEARGL 426
           G++YVPTYEDKDGDWMLVGDVPW MF+ SCKRLRIMKGSEA GL
Sbjct: 183 GSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGL 226



 Score = 68.9 bits (167), Expect(2) = 5e-64
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -3

Query: 924 QVVGWPPVRSFRKNILSVQKSNTKEDTGMSSAAFVKVSMDG 802
           QVVGWPPVRSFRKNIL+VQK++++E+   SSAAFVKVSMDG
Sbjct: 89  QVVGWPPVRSFRKNILTVQKNSSEEEKASSSAAFVKVSMDG 129



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 381 DVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 271
           DVPWEMFV+SCKRLRIMKGSEAIGLAPRAVEKCKNRS
Sbjct: 202 DVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 238


>emb|CBI35213.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  203 bits (517), Expect(2) = 6e-64
 Identities = 96/104 (92%), Positives = 101/104 (97%)
 Frame = -1

Query: 737 VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNESKLMDLLN 558
           VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCG+QGMKDFMNESKL+DLLN
Sbjct: 55  VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLN 114

Query: 557 GTEYVPTYEDKDGDWMLVGDVPWNMFITSCKRLRIMKGSEARGL 426
           G++YVPTYEDKDGDWMLVGDVPW MF+ SCKRLRIMKGSEA GL
Sbjct: 115 GSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGL 158



 Score = 68.9 bits (167), Expect(2) = 6e-64
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -3

Query: 924 QVVGWPPVRSFRKNILSVQKSNTKEDTGMSSAAFVKVSMDG 802
           QVVGWPPVRSFRKNIL+VQK++++E+   SSAAFVKVSMDG
Sbjct: 21  QVVGWPPVRSFRKNILTVQKNSSEEEKASSSAAFVKVSMDG 61



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 381 DVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 271
           DVPWEMFV+SCKRLRIMKGSEAIGLAPRAVEKCKNRS
Sbjct: 134 DVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 170


>ref|XP_002531288.1| Auxin-responsive protein IAA16, putative [Ricinus communis]
           gi|223529121|gb|EEF31101.1| Auxin-responsive protein
           IAA16, putative [Ricinus communis]
          Length = 257

 Score =  204 bits (518), Expect(2) = 3e-61
 Identities = 96/104 (92%), Positives = 101/104 (97%)
 Frame = -1

Query: 737 VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNESKLMDLLN 558
           VKVSMDGAPYLRKVDLK+YKSYQELSDALGKMFSSFTIGNCG+QGMKDFMNESKL+DLLN
Sbjct: 142 VKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLN 201

Query: 557 GTEYVPTYEDKDGDWMLVGDVPWNMFITSCKRLRIMKGSEARGL 426
           G+EYVPTYEDKDGDWMLVGDVPW MF+ SCKRLRIMKGSEA GL
Sbjct: 202 GSEYVPTYEDKDGDWMLVGDVPWEMFVNSCKRLRIMKGSEAIGL 245



 Score = 59.3 bits (142), Expect(2) = 3e-61
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 14/55 (25%)
 Frame = -3

Query: 924 QVVGWPPVRSFRKNILSVQKSNTKE--------------DTGMSSAAFVKVSMDG 802
           QVVGWPP+RSFRKN+++VQK++T E               +G +SAAFVKVSMDG
Sbjct: 94  QVVGWPPIRSFRKNVMAVQKNSTDEGEKGTATSAPAAAATSGSTSAAFVKVSMDG 148



 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 381 DVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 271
           DVPWEMFV+SCKRLRIMKGSEAIGLAPRAVEKCKNRS
Sbjct: 221 DVPWEMFVNSCKRLRIMKGSEAIGLAPRAVEKCKNRS 257


>ref|XP_003521268.1| PREDICTED: auxin-induced protein AUX28-like [Glycine max]
          Length = 254

 Score =  196 bits (498), Expect(2) = 3e-61
 Identities = 93/107 (86%), Positives = 99/107 (92%)
 Frame = -1

Query: 737 VKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNESKLMDLLN 558
           VKVSMDGAPYLRKVDLKMYKSY+ELSD+LGKMFSSFTIGNC +QGMKDFMNESKL DLLN
Sbjct: 137 VKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTIGNCESQGMKDFMNESKLNDLLN 196

Query: 557 GTEYVPTYEDKDGDWMLVGDVPWNMFITSCKRLRIMKGSEARGLGYA 417
            ++YVPTYEDKDGDWMLVGDVPW MF+ SCKRLRIMKG EA GLG A
Sbjct: 197 SSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLA 243



 Score = 67.0 bits (162), Expect(2) = 3e-61
 Identities = 40/73 (54%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = -3

Query: 1011 DPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSNTKEDTGMSS 832
            DP++K K LPKEK                QVVGWPPVRSFRKN+L+VQKS  +E+   SS
Sbjct: 73   DPTDKHKTLPKEKTLLPADPAKPPAKA--QVVGWPPVRSFRKNMLAVQKSVGEENEKNSS 130

Query: 831  ---AAFVKVSMDG 802
               A+FVKVSMDG
Sbjct: 131  SPNASFVKVSMDG 143



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 32/39 (82%), Positives = 34/39 (87%), Gaps = 2/39 (5%)
 Frame = -3

Query: 381 DVPWEMFVDSCKRLRIMKGSEAI--GLAPRAVEKCKNRS 271
           DVPWEMFV+SCKRLRIMKG EAI  GLAPRA+ K KNRS
Sbjct: 216 DVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKSKNRS 254


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