BLASTX nr result

ID: Coptis25_contig00001162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001162
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274736.1| PREDICTED: 125 kDa kinesin-related protein [...   114   5e-25
ref|XP_004161696.1| PREDICTED: 125 kDa kinesin-related protein-l...   100   1e-18
ref|XP_004142211.1| PREDICTED: 125 kDa kinesin-related protein-l...   100   1e-18
ref|XP_002533001.1| Bipolar kinesin KRP-130, putative [Ricinus c...   100   1e-18
ref|XP_003536962.1| PREDICTED: probable 125 kDa kinesin-related ...    94   6e-17

>ref|XP_002274736.1| PREDICTED: 125 kDa kinesin-related protein [Vitis vinifera]
            gi|297741543|emb|CBI32675.3| unnamed protein product
            [Vitis vinifera]
          Length = 1048

 Score =  114 bits (284), Expect(2) = 5e-25
 Identities = 63/123 (51%), Positives = 84/123 (68%)
 Frame = +1

Query: 595  KSSNGFFYDLQCRFSKLSKSNEEDQAEKSG*IETLGKTFQEESSLEEKQALQKIAVILGT 774
            K+S  FF DL  R SKL  + E  Q +K   +ET  K F+EES+ EEK A++KIAVIL  
Sbjct: 722  KASVDFFNDLHHRASKLMTTLEGSQKQKFHQVETFEKMFKEESAREEKLAMEKIAVILAN 781

Query: 775  LTSKKTEMVSKALRNMDEENIEVKKRLEQEMSSLQEVLANAKAEWHEYFGEVQDHFLEDS 954
            LTSKKT MVS+  R +    +E  KRL+QE+S++Q++  +AK E  EY G+V+ HFLED+
Sbjct: 782  LTSKKTAMVSETSRYIQGSCMEENKRLQQEISNMQQIAVHAKKEVGEYLGKVEKHFLEDT 841

Query: 955  FSA 963
            FSA
Sbjct: 842  FSA 844



 Score = 28.1 bits (61), Expect(2) = 5e-25
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 554 QGLQRNLVSVQVILKVAMGFF 616
           +GLQR LVS QVI K ++ FF
Sbjct: 708 EGLQRTLVSSQVISKASVDFF 728


>ref|XP_004161696.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus]
          Length = 1049

 Score =  100 bits (248), Expect = 1e-18
 Identities = 55/122 (45%), Positives = 77/122 (63%)
 Frame = +1

Query: 598  SSNGFFYDLQCRFSKLSKSNEEDQAEKSG*IETLGKTFQEESSLEEKQALQKIAVILGTL 777
            +S   F +L    SK+    EE Q E+S  +    KTF+E++  EEKQAL  IA I+  L
Sbjct: 725  ASMNIFNELHSHASKVMTLLEESQIERSNQLVNFEKTFKEQAEKEEKQALSNIAAIIANL 784

Query: 778  TSKKTEMVSKALRNMDEENIEVKKRLEQEMSSLQEVLANAKAEWHEYFGEVQDHFLEDSF 957
            TSKK+EMVSKA  N+ E N++  K L+QEMSS+Q+V  +AK + +EY  +V+ HF E   
Sbjct: 785  TSKKSEMVSKASINIQEWNLQHNKILQQEMSSMQQVSNHAKKDMNEYVEKVESHFTESMI 844

Query: 958  SA 963
            S+
Sbjct: 845  SS 846


>ref|XP_004142211.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus]
          Length = 1049

 Score =  100 bits (248), Expect = 1e-18
 Identities = 55/122 (45%), Positives = 77/122 (63%)
 Frame = +1

Query: 598  SSNGFFYDLQCRFSKLSKSNEEDQAEKSG*IETLGKTFQEESSLEEKQALQKIAVILGTL 777
            +S   F +L    SK+    EE Q E+S  +    KTF+E++  EEKQAL  IA I+  L
Sbjct: 725  ASMNIFNELHSHASKVMTLLEESQIERSNQLVNFEKTFKEQAEKEEKQALSNIAAIIANL 784

Query: 778  TSKKTEMVSKALRNMDEENIEVKKRLEQEMSSLQEVLANAKAEWHEYFGEVQDHFLEDSF 957
            TSKK+EMVSKA  N+ E N++  K L+QEMSS+Q+V  +AK + +EY  +V+ HF E   
Sbjct: 785  TSKKSEMVSKASINIQEWNLQHNKILQQEMSSMQQVSNHAKKDMNEYVEKVESHFTESMI 844

Query: 958  SA 963
            S+
Sbjct: 845  SS 846


>ref|XP_002533001.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
            gi|223527212|gb|EEF29376.1| Bipolar kinesin KRP-130,
            putative [Ricinus communis]
          Length = 1044

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 52/122 (42%), Positives = 83/122 (68%)
 Frame = +1

Query: 595  KSSNGFFYDLQCRFSKLSKSNEEDQAEKSG*IETLGKTFQEESSLEEKQALQKIAVILGT 774
            K++  FF DL  + S +  + +E Q +KS  +    K+F+EE++ EEKQAL  IA IL T
Sbjct: 717  KAAVNFFCDLHHQASNVITALQESQIKKSHQLADFEKSFKEEAAREEKQALASIAEILAT 776

Query: 775  LTSKKTEMVSKALRNMDEENIEVKKRLEQEMSSLQEVLANAKAEWHEYFGEVQDHFLEDS 954
            LTS++T +VS+A RN+ + N++   R +++MSS+Q+V  +AK E + Y  +V+ HF+ED+
Sbjct: 777  LTSRRTAVVSEASRNIHDLNLQENNRFQKDMSSMQQVSTDAKEEINRYVEQVERHFMEDT 836

Query: 955  FS 960
            FS
Sbjct: 837  FS 838


>ref|XP_003536962.1| PREDICTED: probable 125 kDa kinesin-related protein-like [Glycine
            max]
          Length = 1046

 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
 Frame = +1

Query: 565  KESGFSASYI------KSSNGFFYDLQCRFSKLSKSNEEDQAEKSG*IETLGKTFQEESS 726
            +E GF  S        +++  FF D+  R S++ K  EE Q E+   +    K F+EE  
Sbjct: 707  QEEGFQQSLTSARVVSEAAVNFFDDIHLRSSRVMKILEESQNERFQQLTNFEKKFKEEVE 766

Query: 727  LEEKQALQKIAVILGTLTSKKTEMVSKALRNMDEENIEVKKRLEQEMSSLQEVLANAKAE 906
            +EE QAL+KIA IL  LTSK+T MVS A R+M + +++  KRL  EM ++QEV  +   E
Sbjct: 767  IEEGQALEKIAAILAALTSKRTAMVSGASRHMQDTSMQQSKRLRLEMLNMQEVSKDGTKE 826

Query: 907  WHEYFGEVQDHFLEDSFSA 963
             +EY   V+ H++E  FSA
Sbjct: 827  VNEYVENVKSHYVEQIFSA 845


Top