BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001158
         (1949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271615.1| PREDICTED: uncharacterized protein LOC100264...   603   e-170
ref|XP_004145937.1| PREDICTED: ATPase family AAA domain-containi...   591   e-167
ref|XP_002869548.1| hypothetical protein ARALYDRAFT_492017 [Arab...   583   e-166
ref|XP_002321379.1| predicted protein [Populus trichocarpa] gi|2...   586   e-166
ref|NP_194498.1| 26S proteasome regulatory particle chain RPT6-l...   581   e-166

>ref|XP_002271615.1| PREDICTED: uncharacterized protein LOC100264007 [Vitis vinifera]
          Length = 867

 Score =  603 bits (1554), Expect(2) = e-170
 Identities = 303/368 (82%), Positives = 335/368 (91%), Gaps = 2/368 (0%)
 Frame = +2

Query: 443  SALVLFAGLRQLDPNRESSKKALEHKKEISKRLGRPLIHTNAYEDVIACDVINPDHIDVE 622
            S LVLFAGLR LDPNRESSKKALEH+KEI+KRLGRPLI TN+YEDVIACDVINPDHIDVE
Sbjct: 20   SCLVLFAGLRHLDPNRESSKKALEHRKEIAKRLGRPLIQTNSYEDVIACDVINPDHIDVE 79

Query: 623  FETIGGLDNIKQALYELVILPLRRPELFSYGKLLTPQKGVLLYGPPGTGKTMLAKAIAKE 802
            F++IGGL+ IKQAL ELVILPLRRPELFS+GKLL PQKGVLLYGPPGTGKTMLAKAIAKE
Sbjct: 80   FDSIGGLETIKQALVELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKE 139

Query: 803  SGAVFINVRVSNLMSKWFGDAQKLVSAVFTLAHKLQPAIIFIDEVDSFLGQRRSTDHEAL 982
            SGAVFINVR+SNLMSKWFGDAQKLV+AVF+LA+KLQPAIIFIDEVD+FLGQRR+TDHEA+
Sbjct: 140  SGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDTFLGQRRTTDHEAM 199

Query: 983  SNMKTEFMALWDGFTTDQNARVMVLAATNRPGELDEAILRRLPQAFEIGMPDHGERIQIL 1162
            +NMKTEFMALWDGFTTDQNARVMVLAATNRP ELDEAILRRLPQAFEIG+PD  ER++IL
Sbjct: 200  ANMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERVEIL 259

Query: 1163 NVILKGEKVEKDINFDLISRLCEGYTGSDLLELCKKAAYFPLRDLLDDEKKGMRSSTPRS 1342
             V+LKGEKV  DIN+D I+ LCEGYTGSD+LELCKKAAYFP+R+LLDDEK G  S  PR 
Sbjct: 260  KVVLKGEKVADDINYDRIASLCEGYTGSDILELCKKAAYFPIRELLDDEKNGKPSPAPRP 319

Query: 1343 LSQADLERVLATSRKTRIAASEYSGLNSQSSAWSGNSEED--QVKHAISEFSKLVLSRIV 1516
            LSQ DLE+VLATSRKT++AASEY+GLN QSS WSGN E D  QV+ AI E SKLVLS+I+
Sbjct: 320  LSQLDLEKVLATSRKTKVAASEYTGLNPQSSGWSGNREPDDYQVQSAIGELSKLVLSQIM 379

Query: 1517 SFQPDDQD 1540
            + Q D QD
Sbjct: 380  NLQSDAQD 387



 Score = 25.0 bits (53), Expect(2) = e-170
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 399 ETKVLQELLLYISSAA 446
           ET+ LQEL+LY +SAA
Sbjct: 3   ETRFLQELVLYAASAA 18


>ref|XP_004145937.1| PREDICTED: ATPase family AAA domain-containing protein 1-A-like
            [Cucumis sativus] gi|449497367|ref|XP_004160382.1|
            PREDICTED: ATPase family AAA domain-containing protein
            1-A-like [Cucumis sativus]
          Length = 392

 Score =  591 bits (1523), Expect(2) = e-167
 Identities = 295/368 (80%), Positives = 339/368 (92%), Gaps = 2/368 (0%)
 Frame = +2

Query: 443  SALVLFAGLRQLDPNRESSKKALEHKKEISKRLGRPLIHTNAYEDVIACDVINPDHIDVE 622
            S LVLFAGLR LDPNRE+SKKALEHKKEI+KRLGRPLI TN YEDVIACDVINPDHIDVE
Sbjct: 24   SCLVLFAGLRHLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVE 83

Query: 623  FETIGGLDNIKQALYELVILPLRRPELFSYGKLLTPQKGVLLYGPPGTGKTMLAKAIAKE 802
            F +IGGL++IKQAL ELVILPL+RPELFS+GKLL PQKGVLLYGPPGTGKTMLAKAIAKE
Sbjct: 84   FNSIGGLESIKQALIELVILPLKRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKE 143

Query: 803  SGAVFINVRVSNLMSKWFGDAQKLVSAVFTLAHKLQPAIIFIDEVDSFLGQRRSTDHEAL 982
            SGAVFINVR+SNLMSKWFGDAQKLV+AVF+LA+KLQPAIIFIDEVDSFLGQRR+TDHEA+
Sbjct: 144  SGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEAM 203

Query: 983  SNMKTEFMALWDGFTTDQNARVMVLAATNRPGELDEAILRRLPQAFEIGMPDHGERIQIL 1162
            +NMKTEFMALWDGFTTDQ+ARVMVLAATNRP ELDEAILRRLPQAFEIG+PD  ER++IL
Sbjct: 204  TNMKTEFMALWDGFTTDQSARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERVEIL 263

Query: 1163 NVILKGEKVEKDINFDLISRLCEGYTGSDLLELCKKAAYFPLRDLLDDEKKGMRSSTPRS 1342
             VILKGE+VE +I++D ++ LCEGYTGSD+LELCKKAAYFP+RDLLD+EKKG +SS PR 
Sbjct: 264  KVILKGERVENNIDYDRVASLCEGYTGSDILELCKKAAYFPIRDLLDEEKKGKQSSEPRP 323

Query: 1343 LSQADLERVLATSRKTRIAASEYSGLNSQSSAWSGNSE--EDQVKHAISEFSKLVLSRIV 1516
            LSQ+DLE+VLATS KT++AASEY+GL+S SS W+G+ E  + +V+ AISE SKLV+S+I+
Sbjct: 324  LSQSDLEKVLATSTKTKVAASEYTGLSSNSSGWTGHREAGDYEVQAAISELSKLVVSQIL 383

Query: 1517 SFQPDDQD 1540
            + Q D +D
Sbjct: 384  NIQSDTRD 391



 Score = 25.8 bits (55), Expect(2) = e-167
 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = +3

Query: 384 MGEGR-ETKVLQELLLYISSAA 446
           MG G  ET+ +QEL+LY +SAA
Sbjct: 1   MGSGSSETRFVQELILYAASAA 22


>ref|XP_002869548.1| hypothetical protein ARALYDRAFT_492017 [Arabidopsis lyrata subsp.
            lyrata] gi|297315384|gb|EFH45807.1| hypothetical protein
            ARALYDRAFT_492017 [Arabidopsis lyrata subsp. lyrata]
          Length = 398

 Score =  583 bits (1502), Expect(2) = e-166
 Identities = 293/366 (80%), Positives = 331/366 (90%)
 Frame = +2

Query: 443  SALVLFAGLRQLDPNRESSKKALEHKKEISKRLGRPLIHTNAYEDVIACDVINPDHIDVE 622
            S LVLFAGLR LDPNRE+SKKALEHKKEISKRLGRPL+ TN YEDVIACDVINPDHI+VE
Sbjct: 23   SCLVLFAGLRHLDPNREASKKALEHKKEISKRLGRPLVQTNPYEDVIACDVINPDHINVE 82

Query: 623  FETIGGLDNIKQALYELVILPLRRPELFSYGKLLTPQKGVLLYGPPGTGKTMLAKAIAKE 802
            F++IGGL+ IKQALYELVILPL+RPELF+YGKLL PQKGVLLYGPPGTGKTMLAKAIAKE
Sbjct: 83   FDSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKE 142

Query: 803  SGAVFINVRVSNLMSKWFGDAQKLVSAVFTLAHKLQPAIIFIDEVDSFLGQRRSTDHEAL 982
            SGAVFINVRVSNLMSKWFGDAQKLVSAVF+LA+KLQPAIIFIDEV+SFLGQRRSTDHEA+
Sbjct: 143  SGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQRRSTDHEAM 202

Query: 983  SNMKTEFMALWDGFTTDQNARVMVLAATNRPGELDEAILRRLPQAFEIGMPDHGERIQIL 1162
            +NMKTEFMALWDGF+TD +ARVMVLAATNRP ELDEAILRRLPQAFEIG+PD  ER +IL
Sbjct: 203  ANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEIL 262

Query: 1163 NVILKGEKVEKDINFDLISRLCEGYTGSDLLELCKKAAYFPLRDLLDDEKKGMRSSTPRS 1342
             V LKGE+VE DI+FD I+RLCEGYTGSD+ ELCKKAAYFP+R++L+ E+KG     PR 
Sbjct: 263  KVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIREILEAERKGTPCLAPRP 322

Query: 1343 LSQADLERVLATSRKTRIAASEYSGLNSQSSAWSGNSEEDQVKHAISEFSKLVLSRIVSF 1522
            LSQ D E+VLATS+KT++AA EYS L+SQSSAW G+SE D+V+ AIS  SKL+LS+I++ 
Sbjct: 323  LSQLDFEKVLATSKKTQVAAGEYS-LSSQSSAWRGSSEPDEVQAAISGISKLLLSQIINL 381

Query: 1523 QPDDQD 1540
            Q D QD
Sbjct: 382  QADSQD 387



 Score = 32.0 bits (71), Expect(2) = e-166
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 384 MGEGRETKVLQELLLYISSAA 446
           MG   ETK+LQEL+LY +SAA
Sbjct: 1   MGRSSETKILQELILYAASAA 21


>ref|XP_002321379.1| predicted protein [Populus trichocarpa] gi|222868375|gb|EEF05506.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  586 bits (1511), Expect(2) = e-166
 Identities = 295/367 (80%), Positives = 333/367 (90%), Gaps = 1/367 (0%)
 Frame = +2

Query: 443  SALVLFAGLRQLDPNRESSKKALEHKKEISKRLGRPLIHTNAYEDVIACDVINPDHIDVE 622
            S LVLFAGLRQLDPNRE+SKKALEHKKEI+KRLGRPLI TN YEDVIACDVINPDHIDVE
Sbjct: 23   SCLVLFAGLRQLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVE 82

Query: 623  FETIGGLDNIKQALYELVILPLRRPELFSYGKLLTPQKGVLLYGPPGTGKTMLAKAIAKE 802
            F +IGGL+ IKQALYELVILPLRRPELFS+GKLL PQKGVLLYGPPGTGKTMLAKAIA+E
Sbjct: 83   FGSIGGLEAIKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIARE 142

Query: 803  SGAVFINVRVSNLMSKWFGDAQKLVSAVFTLAHKLQPAIIFIDEVDSFLGQRRSTDHEAL 982
            SGAVFINVR+SNLMSKWFGDAQKLV+AVF+LA+KLQPAIIFIDEVDSFLGQRR+TDHEAL
Sbjct: 143  SGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEAL 202

Query: 983  SNMKTEFMALWDGFTTDQNARVMVLAATNRPGELDEAILRRLPQAFEIGMPDHGERIQIL 1162
            +NMKTEFMALWDGFTTDQNA+VMVLAATNRP ELDEAILRRLPQAFEIGMPD  ER +IL
Sbjct: 203  TNMKTEFMALWDGFTTDQNAQVMVLAATNRPSELDEAILRRLPQAFEIGMPDQRERAEIL 262

Query: 1163 NVILKGEKVEKDINFDLISRLCEGYTGSDLLELCKKAAYFPLRDLLDDEKKGMRSSTPRS 1342
             V+LKGEK+E  I+F+ I+ LCEGYTGSDLLELCKKAAYFP+R++LD+EKKG +S  PR 
Sbjct: 263  KVVLKGEKIENSIDFNYIASLCEGYTGSDLLELCKKAAYFPIREILDEEKKGKKSCAPRP 322

Query: 1343 LSQADLERVLATSRKTRIAASEYSGLNSQSSAWSGNSEEDQVKHAISEFSKLVLSRIVSF 1522
            LSQADL+RVLATS KT +AA+EYS  +SQS  W   S++ QV+  I+E SKL++S+I++ 
Sbjct: 323  LSQADLQRVLATSTKTGVAANEYSRSSSQSPGWPRQSDDYQVQATINELSKLMVSQILNL 382

Query: 1523 Q-PDDQD 1540
            Q PD+QD
Sbjct: 383  QPPDNQD 389



 Score = 27.3 bits (59), Expect(2) = e-166
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 399 ETKVLQELLLYISSAA 446
           ETK LQELLLY +SAA
Sbjct: 6   ETKFLQELLLYAASAA 21


>ref|NP_194498.1| 26S proteasome regulatory particle chain RPT6-like protein
            [Arabidopsis thaliana] gi|4469019|emb|CAB38280.1|
            putative protein [Arabidopsis thaliana]
            gi|7269622|emb|CAB81418.1| putative protein [Arabidopsis
            thaliana] gi|20260328|gb|AAM13062.1| putative protein
            [Arabidopsis thaliana] gi|21553404|gb|AAM62497.1| 26S
            proteasome regulatory particle chain RPT6-like protein
            [Arabidopsis thaliana] gi|23197836|gb|AAN15445.1|
            putative protein [Arabidopsis thaliana]
            gi|110740771|dbj|BAE98483.1| hypothetical protein
            [Arabidopsis thaliana] gi|332659980|gb|AEE85380.1| 26S
            proteasome regulatory particle chain RPT6-like protein
            [Arabidopsis thaliana]
          Length = 398

 Score =  581 bits (1498), Expect(2) = e-166
 Identities = 293/366 (80%), Positives = 330/366 (90%)
 Frame = +2

Query: 443  SALVLFAGLRQLDPNRESSKKALEHKKEISKRLGRPLIHTNAYEDVIACDVINPDHIDVE 622
            S LVLFAGLR LDPNRE+SKKALEHKKEISKRLGRPL+ TN YEDVIACDVINPDHIDVE
Sbjct: 23   SCLVLFAGLRHLDPNREASKKALEHKKEISKRLGRPLVQTNPYEDVIACDVINPDHIDVE 82

Query: 623  FETIGGLDNIKQALYELVILPLRRPELFSYGKLLTPQKGVLLYGPPGTGKTMLAKAIAKE 802
            F +IGGL+ IKQALYELVILPL+RPELF+YGKLL PQKGVLLYGPPGTGKTMLAKAIAKE
Sbjct: 83   FGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKE 142

Query: 803  SGAVFINVRVSNLMSKWFGDAQKLVSAVFTLAHKLQPAIIFIDEVDSFLGQRRSTDHEAL 982
            SGAVFINVRVSNLMSKWFGDAQKLVSAVF+LA+KLQPAIIFIDEV+SFLGQRRSTDHEA+
Sbjct: 143  SGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQRRSTDHEAM 202

Query: 983  SNMKTEFMALWDGFTTDQNARVMVLAATNRPGELDEAILRRLPQAFEIGMPDHGERIQIL 1162
            +NMKTEFMALWDGF+TD +ARVMVLAATNRP ELDEAILRRLPQAFEIG+PD  ER +IL
Sbjct: 203  ANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEIL 262

Query: 1163 NVILKGEKVEKDINFDLISRLCEGYTGSDLLELCKKAAYFPLRDLLDDEKKGMRSSTPRS 1342
             V LKGE+VE DI+FD I+RLCEGYTGSD+ ELCKKAAYFP+R++LD E+KG     PR 
Sbjct: 263  KVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIREILDAERKGKPCLDPRP 322

Query: 1343 LSQADLERVLATSRKTRIAASEYSGLNSQSSAWSGNSEEDQVKHAISEFSKLVLSRIVSF 1522
            LSQ DLE+VLATS+KT++AA EYS L+SQSSAW G+ E D+V+ AIS  SKL++S+I++ 
Sbjct: 323  LSQLDLEKVLATSKKTQVAAGEYS-LSSQSSAWRGSREPDEVQAAISGISKLLVSQIINL 381

Query: 1523 QPDDQD 1540
            Q + QD
Sbjct: 382  QSESQD 387



 Score = 31.2 bits (69), Expect(2) = e-166
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 384 MGEGRETKVLQELLLYISSAA 446
           MG   ETK+LQEL+LY +SAA
Sbjct: 1   MGGSSETKILQELILYAASAA 21