BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001154
         (1753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 h...   479   e-133
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h...   475   e-131
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h...   475   e-131
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]   473   e-131
ref|XP_002298619.1| chromatin remodeling complex subunit [Populu...   472   e-130

>ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
          Length = 543

 Score =  479 bits (1234), Expect = e-133
 Identities = 252/421 (59%), Positives = 300/421 (71%), Gaps = 5/421 (1%)
 Frame = -1

Query: 1666 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPMHPRGQDGSH----FQGQFQSPL-RT 1502
            MS NNNN +  +G  S    N+G+ S++IP N P   + Q  +     FQGQF  PL + 
Sbjct: 1    MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSN-PGFSQSQGQAQIPVGFQGQF--PLSQA 57

Query: 1501 QTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPSLSTPGTASG 1322
              +                                            SSPS+STPG ASG
Sbjct: 58   HAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGVSSPSISTPGNASG 117

Query: 1321 GAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPESALY 1142
              KR+  K           NS S  + MELTPAARRKK+KLPEKQL D+VAA+LPESALY
Sbjct: 118  --KRIPMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALY 175

Query: 1141 TQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNTEPPS 962
            TQLLEFE+RVDA LARKK DIQE+LKNPPCIQKTLR+YVFNT+ANQIR+IP++ N EPP+
Sbjct: 176  TQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPT 235

Query: 961  WSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITWESAR 782
            W+LKI+GRILEDGVDPD  G++QK + LYPKFS+FFK+++I+LD  LYP+N  I WE+AR
Sbjct: 236  WTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENAR 295

Query: 781  SAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAIWHY 602
            S APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLSP L +VL IEVDTR R++AAIWHY
Sbjct: 296  SPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHY 355

Query: 601  VKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRLSGN 422
            VKARKLQ+P+DP++F CDPPL+KVFGEE MKF MVSQKIS HL PPQPI LEHKI+LSGN
Sbjct: 356  VKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGN 415

Query: 421  N 419
            +
Sbjct: 416  S 416


>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
            gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
            complex component SNF12 homolog [Cucumis sativus]
          Length = 547

 Score =  475 bits (1223), Expect = e-131
 Identities = 250/425 (58%), Positives = 300/425 (70%), Gaps = 9/425 (2%)
 Frame = -1

Query: 1666 MSANNNNHTTNMGGPS--PLGNNSGMMSSNIPMNHPM----HPRGQDGSHFQGQFQSPLR 1505
            MS NNNN    +GG S  P GN SGM+  ++  N        P+ Q G+ FQ  F  PL 
Sbjct: 1    MSMNNNNPPKTLGGASSSPFGN-SGMVPPSMAANSTSFSQPQPQAQLGAGFQNPF--PLT 57

Query: 1504 T-QTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPS--LSTPG 1334
            T Q L                                             SPS   STPG
Sbjct: 58   TAQVLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPG 117

Query: 1333 TASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPE 1154
             A  G KR+ QK            + S  KTMELTPAAR+KK+KLPEKQL D+VAA+LPE
Sbjct: 118  LA--GVKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPE 175

Query: 1153 SALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNT 974
            SALYTQLLEFE+RVDA LARKK+DI E+LKNPPCIQKTLR+YVFNT+ANQ+ +IP++ N 
Sbjct: 176  SALYTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNA 235

Query: 973  EPPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITW 794
            +PP+W+LKIIGRILEDG+DPD  G++Q+ N LYPKFSSFFK+++I+LD  LYP++  I W
Sbjct: 236  DPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVW 295

Query: 793  ESARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAA 614
            E+ARS APHEGFE+KRKGDKEF+  IRLEMNYIPEKFKLSP LM+VL IEVDTR R+IAA
Sbjct: 296  ENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAA 355

Query: 613  IWHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIR 434
            IWHYVKARKLQ+P+DP+FF CDPPL+KVFGE+++KF MVSQ+IS HL PPQPIHLEHK++
Sbjct: 356  IWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVK 415

Query: 433  LSGNN 419
            LSGN+
Sbjct: 416  LSGNS 420


>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 548

 Score =  475 bits (1222), Expect = e-131
 Identities = 246/423 (58%), Positives = 292/423 (69%), Gaps = 8/423 (1%)
 Frame = -1

Query: 1666 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPMHPRGQDGSHFQGQFQSPLRTQTLNX 1487
            M+ NNNN   N+G  S    N+GM S  +P N P+  + Q      G FQ   +    + 
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPAN-PVFSQPQAQGQIGGGFQGQFQLSQAHQ 59

Query: 1486 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------SSPSLSTPGT 1331
                                                              SSPS+  PG 
Sbjct: 60   AHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGN 119

Query: 1330 ASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPES 1151
            ++   KR  QK           N++S  K MELTPAARRKK+KLPEKQL DRVAA+LPES
Sbjct: 120  SN--MKRTLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPES 177

Query: 1150 ALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNTE 971
            ALYTQLLEFE+RVDA LARKKIDIQE+LKNPPC+QKTLR+Y+FNT+ANQIR+IP++ N E
Sbjct: 178  ALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAE 237

Query: 970  PPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITWE 791
            PP+W+LKIIGRILE+GVDPD   M+ K N  YPKFSSFFK+++I+LD  LYP+N  I WE
Sbjct: 238  PPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWE 297

Query: 790  SARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAI 611
            +ARS APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLS  LM+VL IEVDTR R+IAAI
Sbjct: 298  NARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAI 357

Query: 610  WHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRL 431
            WHYVKARKLQ+P+DP+FF CDPPL+KVFGE++MKF MVSQKIS HL+PPQPIHLEHKI+L
Sbjct: 358  WHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKL 417

Query: 430  SGN 422
            SGN
Sbjct: 418  SGN 420


>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
          Length = 548

 Score =  473 bits (1216), Expect = e-131
 Identities = 245/423 (57%), Positives = 291/423 (68%), Gaps = 8/423 (1%)
 Frame = -1

Query: 1666 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPMHPRGQDGSHFQGQFQSPLRTQTLNX 1487
            M+ NNNN   N+G  S    N+GM S  +P N P+  + Q      G FQ   +    + 
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPAN-PVFSQPQAQGQIGGGFQGQFQLSQAHQ 59

Query: 1486 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------SSPSLSTPGT 1331
                                                              SSPS+  PG 
Sbjct: 60   AHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGN 119

Query: 1330 ASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPES 1151
            ++   KR  QK           N++S  K MELTPAARRKK+KLPEKQL DRVAA+LPES
Sbjct: 120  SN--MKRXLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPES 177

Query: 1150 ALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSIPERQNTE 971
            ALYTQLLEFE+RVDA LARKKIDIQE+LKNPPC+QKTLR+Y+FNT+ NQIR+IP++ N E
Sbjct: 178  ALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAE 237

Query: 970  PPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPENATITWE 791
            PP+W+LKIIGRILE+GVDPD   M+ K N  YPKFSSFFK+++I+LD  LYP+N  I WE
Sbjct: 238  PPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWE 297

Query: 790  SARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAI 611
            +ARS APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLS  LM+VL IEVDTR R+IAAI
Sbjct: 298  NARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAI 357

Query: 610  WHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRL 431
            WHYVKARKLQ+P+DP+FF CDPPL+KVFGE++MKF MVSQKIS HL+PPQPIHLEHKI+L
Sbjct: 358  WHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKL 417

Query: 430  SGN 422
            SGN
Sbjct: 418  SGN 420


>ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222845877|gb|EEE83424.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 555

 Score =  472 bits (1214), Expect = e-130
 Identities = 253/431 (58%), Positives = 299/431 (69%), Gaps = 15/431 (3%)
 Frame = -1

Query: 1666 MSANNNNHTTN----MGGPSPLGNNSGMMSSNIPMNHPMHPRGQD--GSHFQG-QFQSPL 1508
            MS NNNN+  N    +G  S    NSGM++ ++  N P  P+ Q   G+ FQG QFQ   
Sbjct: 1    MSMNNNNNNNNPPKSLGQSSSPFGNSGMVNPSMGAN-PTFPQAQAQMGAGFQGGQFQLSQ 59

Query: 1507 RTQTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------SSP 1352
               TL                                           +        SSP
Sbjct: 60   AQATLQAHLKAQQAHAQAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSP 119

Query: 1351 SLSTPGTASGGAKRVNQKXXXXXXXXXXXNSVSSFKTMELTPAARRKKRKLPEKQLPDRV 1172
            S STPG AS  AKR+ QK           + VS  K M+L+ AARRKK+KLPEKQL DRV
Sbjct: 120  SFSTPGNAS--AKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRV 177

Query: 1171 AALLPESALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRLYVFNTYANQIRSI 992
            AA+LPESALYTQLLEFE RVDA LARKK+DIQE+LK+PPC+QKTLR+YVFNT+ANQIR+I
Sbjct: 178  AAILPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTI 237

Query: 991  PERQNTEPPSWSLKIIGRILEDGVDPDSGGMIQKPNALYPKFSSFFKKISIALDHSLYPE 812
            P++ N +PP+W+LK+IGRILEDGVDPD  G +QK N LYPKFSSFFK++SI LD  LYP+
Sbjct: 238  PKKPNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPD 297

Query: 811  NATITWESARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTR 632
            N  I WE ARS APHEGFE+KRKGDKEF+  IRLEMNY+PEKFKLSP LM+VL IEV+TR
Sbjct: 298  NHIIIWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETR 357

Query: 631  ARVIAAIWHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIH 452
             R+IAAIWHYVKARKLQ+P DP+FF CD PL+KVFGE +MKF MVSQ+IS HL+PPQPIH
Sbjct: 358  PRIIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIH 417

Query: 451  LEHKIRLSGNN 419
            LEHKI+LSGN+
Sbjct: 418  LEHKIKLSGNS 428