BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00001141
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   102   2e-20
ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|3068793...   101   7e-20
dbj|BAD35227.1| putative chaperonin 21 precursor [Oryza sativa J...    99   5e-19
dbj|BAD35228.1| putative chaperonin 21 precursor [Oryza sativa J...    99   5e-19
ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycin...    99   5e-19

>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/55 (89%), Positives = 55/55 (100%)
 Frame = -3

Query: 165 TPKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEGKTLGK 1
           TPKYTS+KPLGDRVLVKIK+AEEK+VGGILLP+TAQ+KPQGGEVVAVGEGKT+GK
Sbjct: 54  TPKYTSLKPLGDRVLVKIKTAEEKTVGGILLPTTAQTKPQGGEVVAVGEGKTIGK 108



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -3

Query: 174 ISPTPKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEG 16
           I  T     +KPL DRVL+K+  AEEK+ GG+LL   ++ KP  G VVAVG G
Sbjct: 149 ILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEASKEKPSIGTVVAVGPG 201


>ref|NP_197572.1| chaperonin 20 [Arabidopsis thaliana] gi|30687936|ref|NP_851045.1|
           chaperonin 20 [Arabidopsis thaliana]
           gi|334187803|ref|NP_001190350.1| chaperonin 20
           [Arabidopsis thaliana] gi|297808145|ref|XP_002871956.1|
           hypothetical protein ARALYDRAFT_488978 [Arabidopsis
           lyrata subsp. lyrata]
           gi|12643263|sp|O65282.2|CH10C_ARATH RecName: Full=20 kDa
           chaperonin, chloroplastic; AltName: Full=Chaperonin 10;
           Short=Ch-CPN10; Short=Cpn10; AltName: Full=Chaperonin
           20; AltName: Full=Protein Cpn21; Flags: Precursor
           gi|10179872|gb|AAG13931.1|AF268068_1 chaperonin 10
           [Arabidopsis thaliana]
           gi|16226815|gb|AAL16269.1|AF428339_1 AT5g20720/T1M15_120
           [Arabidopsis thaliana]
           gi|16226911|gb|AAL16296.1|AF428366_1 AT5g20720/T1M15_120
           [Arabidopsis thaliana] gi|4127456|emb|CAA09368.1| Cpn21
           protein [Arabidopsis thaliana]
           gi|14334612|gb|AAK59484.1| putative chloroplast Cpn21
           protein [Arabidopsis thaliana]
           gi|14587373|dbj|BAB61619.1| chaperonin 20 [Arabidopsis
           thaliana] gi|17065646|gb|AAL33817.1| putative
           chloroplast Cpn21 protein [Arabidopsis thaliana]
           gi|297317793|gb|EFH48215.1| hypothetical protein
           ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata]
           gi|332005498|gb|AED92881.1| chaperonin 20 [Arabidopsis
           thaliana] gi|332005499|gb|AED92882.1| chaperonin 20
           [Arabidopsis thaliana] gi|332005500|gb|AED92883.1|
           chaperonin 20 [Arabidopsis thaliana]
          Length = 253

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/54 (88%), Positives = 53/54 (98%)
 Frame = -3

Query: 162 PKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEGKTLGK 1
           PKYTS+KPLGDRVLVKIK AEEK++GGILLPSTAQSKPQGGEVVAVGEG+T+GK
Sbjct: 57  PKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGK 110



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/53 (49%), Positives = 33/53 (62%)
 Frame = -3

Query: 174 ISPTPKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEG 16
           I  T     +KPL DRV +K+  AEEK+ GG+LL  T + KP  G V+AVG G
Sbjct: 151 ILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPG 203


>dbj|BAD35227.1| putative chaperonin 21 precursor [Oryza sativa Japonica Group]
          Length = 235

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/54 (87%), Positives = 53/54 (98%)
 Frame = -3

Query: 165 TPKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEGKTLG 4
           TPKYTS+KPLGDRVLVK+ +AEEK+VGGILLPSTAQSKPQGGEVVAVGEG+T+G
Sbjct: 55  TPKYTSLKPLGDRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIG 108



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = -3

Query: 189 KEESCIS--PTPKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEG 16
           KE+  I    T     +KPL DRVL+K+  AE+K+ GG++L  T + KP  G VVAVG G
Sbjct: 143 KEDDIIGVLETDDVKDMKPLNDRVLIKVAEAEDKTAGGLILTETTKEKPSIGTVVAVGPG 202


>dbj|BAD35228.1| putative chaperonin 21 precursor [Oryza sativa Japonica Group]
           gi|125596360|gb|EAZ36140.1| hypothetical protein
           OsJ_20450 [Oryza sativa Japonica Group]
           gi|215737485|dbj|BAG96615.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215769443|dbj|BAH01672.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|341870593|gb|AEK99336.1| chaperonin [Oryza sativa
           Japonica Group]
          Length = 252

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/54 (87%), Positives = 53/54 (98%)
 Frame = -3

Query: 165 TPKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEGKTLG 4
           TPKYTS+KPLGDRVLVK+ +AEEK+VGGILLPSTAQSKPQGGEVVAVGEG+T+G
Sbjct: 55  TPKYTSLKPLGDRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIG 108



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = -3

Query: 189 KEESCIS--PTPKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEG 16
           KE+  I    T     +KPL DRVL+K+  AE+K+ GG++L  T + KP  G VVAVG G
Sbjct: 143 KEDDIIGVLETDDVKDMKPLNDRVLIKVAEAEDKTAGGLILTETTKEKPSIGTVVAVGPG 202


>ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycine max]
           gi|255645102|gb|ACU23050.1| unknown [Glycine max]
          Length = 253

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/54 (85%), Positives = 52/54 (96%)
 Frame = -3

Query: 162 PKYTSVKPLGDRVLVKIKSAEEKSVGGILLPSTAQSKPQGGEVVAVGEGKTLGK 1
           PKYT++KPLGDRVL+KIK AEEK+ GGILLPSTAQ+KPQGGEVVAVGEGKT+GK
Sbjct: 57  PKYTAIKPLGDRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTIGK 110