BLASTX nr result
ID: Coptis25_contig00001133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00001133
(1126 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281637.1| PREDICTED: electron transfer flavoprotein su... 161 7e-55
ref|XP_003527322.1| PREDICTED: electron transfer flavoprotein su... 162 2e-53
ref|XP_002522865.1| electron transport oxidoreductase, putative ... 151 1e-51
gb|AFK39107.1| unknown [Lotus japonicus] 154 2e-50
ref|XP_003607652.1| Electron transfer flavoprotein subunit alpha... 155 2e-50
>ref|XP_002281637.1| PREDICTED: electron transfer flavoprotein subunit alpha,
mitochondrial [Vitis vinifera]
gi|297735970|emb|CBI23944.3| unnamed protein product
[Vitis vinifera]
Length = 361
Score = 161 bits (407), Expect(2) = 7e-55
Identities = 77/112 (68%), Positives = 93/112 (83%)
Frame = +1
Query: 262 TDKLSHPLA*PWAELVHLV*KKGGYSHIIAPSNSFGKNVLPRVAALLDVSSIMDVTNIYG 441
+DK ++P+A PWA+LV L+ +KGGYSHI+A S SFGKN+LPR AALLDVS I DV I G
Sbjct: 99 SDKFTYPVAEPWAKLVQLIQQKGGYSHIMATSGSFGKNILPRAAALLDVSPITDVIEISG 158
Query: 442 SQVYVRPIYAGNALCTVRYTGADPCMLTIRPTSFPVPHISSDSKWDAAPVSQ 597
Q++VRPIYAGNALCTVRYTG+ PCMLT+R TSFPVP S++SK D AP+SQ
Sbjct: 159 PQLFVRPIYAGNALCTVRYTGSAPCMLTVRSTSFPVPLTSANSKSDVAPISQ 210
Score = 80.5 bits (197), Expect(2) = 7e-55
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +2
Query: 665 DTLGKSKYLKHTSQDTERPDLGSARVVVTSGRALKSAENFRXXXXXXXXXXXXVGATRAA 844
D + KSKYL HTSQD+ERPDLG+AR+VVT GRALKSAENF+ VGATRAA
Sbjct: 219 DMVCKSKYLSHTSQDSERPDLGNARIVVTGGRALKSAENFKMIEKLAEKLGAAVGATRAA 278
Query: 845 VD 850
VD
Sbjct: 279 VD 280
>ref|XP_003527322.1| PREDICTED: electron transfer flavoprotein subunit alpha,
mitochondrial-like [Glycine max]
Length = 357
Score = 162 bits (409), Expect(2) = 2e-53
Identities = 80/112 (71%), Positives = 92/112 (82%)
Frame = +1
Query: 262 TDKLSHPLA*PWAELVHLV*KKGGYSHIIAPSNSFGKNVLPRVAALLDVSSIMDVTNIYG 441
+DK +PLA PWA+LVHLV + GGYSHIIA ++SFGKNV+PR AALLDVS I DVT I
Sbjct: 96 SDKFKNPLAEPWAKLVHLVHQSGGYSHIIAAASSFGKNVVPRAAALLDVSPITDVTGISD 155
Query: 442 SQVYVRPIYAGNALCTVRYTGADPCMLTIRPTSFPVPHISSDSKWDAAPVSQ 597
S +VRPIYAGNALCTVRYTGA+PC+LTIR TSFPVP S DSK + AP+SQ
Sbjct: 156 SNTFVRPIYAGNALCTVRYTGANPCILTIRSTSFPVPQNSVDSKSNEAPISQ 207
Score = 75.1 bits (183), Expect(2) = 2e-53
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = +2
Query: 665 DTLGKSKYLKHTSQDTERPDLGSARVVVTSGRALKSAENFRXXXXXXXXXXXXVGATRAA 844
+ L KS+Y+ TSQD ERPDLG+AR+VVT GRALKSAENF+ VGATRAA
Sbjct: 215 EDLDKSRYISQTSQDDERPDLGNARIVVTGGRALKSAENFKLIEDLANKLGAAVGATRAA 274
Query: 845 VD 850
VD
Sbjct: 275 VD 276
>ref|XP_002522865.1| electron transport oxidoreductase, putative [Ricinus communis]
gi|223537949|gb|EEF39563.1| electron transport
oxidoreductase, putative [Ricinus communis]
Length = 352
Score = 151 bits (381), Expect(2) = 1e-51
Identities = 73/112 (65%), Positives = 90/112 (80%)
Frame = +1
Query: 262 TDKLSHPLA*PWAELVHLV*KKGGYSHIIAPSNSFGKNVLPRVAALLDVSSIMDVTNIYG 441
+DK +H LA W++LV+LV +KGGYSHII +NSFGKN+LPR AALL+VS I DV +I
Sbjct: 90 SDKFTHGLAESWSKLVNLVQQKGGYSHIITAANSFGKNLLPRAAALLNVSPITDVIDISS 149
Query: 442 SQVYVRPIYAGNALCTVRYTGADPCMLTIRPTSFPVPHISSDSKWDAAPVSQ 597
S ++RPIYAGNALCTV+YTG DPCMLTIR TSFPVP +S +S + AP+SQ
Sbjct: 150 STQFIRPIYAGNALCTVKYTGTDPCMLTIRSTSFPVPEVSVNSNSNEAPISQ 201
Score = 79.7 bits (195), Expect(2) = 1e-51
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +2
Query: 665 DTLGKSKYLKHTSQDTERPDLGSARVVVTSGRALKSAENFRXXXXXXXXXXXXVGATRAA 844
D++GKS+Y++ TSQDTERPDLGSAR+V+T GR LKSAENF+ VGATRAA
Sbjct: 210 DSIGKSRYVQCTSQDTERPDLGSARIVITGGRGLKSAENFKMIEKLAEKLGAAVGATRAA 269
Query: 845 VD 850
VD
Sbjct: 270 VD 271
>gb|AFK39107.1| unknown [Lotus japonicus]
Length = 360
Score = 154 bits (390), Expect(2) = 2e-50
Identities = 76/112 (67%), Positives = 88/112 (78%)
Frame = +1
Query: 262 TDKLSHPLA*PWAELVHLV*KKGGYSHIIAPSNSFGKNVLPRVAALLDVSSIMDVTNIYG 441
+D PLA PWA+LVH+V ++GGYSHIIA S+SFGKNV+PR AALLDVS + DVT I
Sbjct: 99 SDTFKSPLAEPWAKLVHMVQQRGGYSHIIAASSSFGKNVMPRAAALLDVSPVTDVTGISD 158
Query: 442 SQVYVRPIYAGNALCTVRYTGADPCMLTIRPTSFPVPHISSDSKWDAAPVSQ 597
S +VRPIYAGNALCTVRYTGA PC+LTIR TSFP P S DSK + A +SQ
Sbjct: 159 SHTFVRPIYAGNALCTVRYTGAGPCILTIRATSFPAPQKSVDSKSNEASISQ 210
Score = 72.4 bits (176), Expect(2) = 2e-50
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +2
Query: 665 DTLGKSKYLKHTSQDTERPDLGSARVVVTSGRALKSAENFRXXXXXXXXXXXXVGATRAA 844
+ LGKS+Y+ T+Q+ ERPDLG+AR+VV+ GRALK+AENF+ VGATRAA
Sbjct: 218 EDLGKSRYISQTTQEDERPDLGNARIVVSGGRALKNAENFKLIENLAEKLGAAVGATRAA 277
Query: 845 VD 850
VD
Sbjct: 278 VD 279
>ref|XP_003607652.1| Electron transfer flavoprotein subunit alpha [Medicago truncatula]
gi|355508707|gb|AES89849.1| Electron transfer
flavoprotein subunit alpha [Medicago truncatula]
Length = 357
Score = 155 bits (393), Expect(2) = 2e-50
Identities = 77/112 (68%), Positives = 88/112 (78%)
Frame = +1
Query: 262 TDKLSHPLA*PWAELVHLV*KKGGYSHIIAPSNSFGKNVLPRVAALLDVSSIMDVTNIYG 441
+D + LA PWA+LVHLV ++ GYSHIIA SNSFGKNV+PR AALLDVS + DVT I
Sbjct: 96 SDTFKNQLAEPWAKLVHLVQQRDGYSHIIAASNSFGKNVMPRAAALLDVSPVTDVTGISD 155
Query: 442 SQVYVRPIYAGNALCTVRYTGADPCMLTIRPTSFPVPHISSDSKWDAAPVSQ 597
S ++RPIYAGNALCTVRYTGA PC+LTIR TSFPV H S DSK D A +SQ
Sbjct: 156 SHTFIRPIYAGNALCTVRYTGASPCILTIRSTSFPVSHKSVDSKSDKASISQ 207
Score = 70.9 bits (172), Expect(2) = 2e-50
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +2
Query: 665 DTLGKSKYLKHTSQDTERPDLGSARVVVTSGRALKSAENFRXXXXXXXXXXXXVGATRAA 844
+ L KS+Y+ TS+D E PDLG+AR+VVT GRALKSAENF+ VGATRAA
Sbjct: 215 EDLDKSRYISQTSRDDEGPDLGNARIVVTGGRALKSAENFKLIENLAKKLGAAVGATRAA 274
Query: 845 VD 850
VD
Sbjct: 275 VD 276